lineage | Count |
---|---|
lineage2.2.2 | 153 |
lineage2.2.1 | 7 |
4 | |
lineage2.2 | 3 |
lineage2.2.2;lineage2.2.1 | 1 |
lineage4.3.4.2 | 2 |
lineage4.8 | 5 |
lineage4.1.2.1 | 2 |
lineage4.1.1.3 | 1 |
lineage4.6.2.2 | 2 |
lineage3 | 2 |
lineage4.6.1.1 | 2 |
lineage4;lineage2.2.1 | 1 |
lineage4.2.2.2 | 1 |
lineage4.3.3;lineage2.2.1 | 1 |
lineage4.9;lineage2.2.1 | 1 |
lineage4.3.3 | 1 |
lineage4.1.2.1;lineage2.2.2 | 1 |
lineage4.1.4 | 1 |
lineage4.2.1 | 2 |
spoligotype | Count |
---|---|
None | 193 |
ID | Drug resistance | Lineage | Country iso2 | ERR1873490 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911613 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873521 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911546 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911640 | MDR-TB | lineage2.2.2 | za | SRR6824489 | MDR-TB | lineage2.2.1 | cn | ERR7911591 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911666 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911607 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911544 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873463 | MDR-TB | lineage2.2.2 | None | ERR5918006 | MDR-TB | lineage2.2.2 | za | ERR8975029 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975782 | Pre-XDR-TB | lineage2.2.2 | None | ERR5918010 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911676 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911587 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911569 | Pre-XDR-TB | lineage2.2.2 | za | ERR212121 | HR-TB | None | ERR7911545 | Pre-XDR-TB | lineage2.2.2 | za | ERR8665864 | Pre-XDR-TB | lineage2.2.1 | None | ERR1873497 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911598 | Pre-XDR-TB | lineage2.2.2 | za | ERR5917979 | Pre-XDR-TB | lineage2.2.2 | za | ERR5918002 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873503 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975778 | Pre-XDR-TB | lineage2.2.2 | None | ERR8686157 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02414982 | Pre-XDR-TB | lineage2.2.2 | se | ERR1873547 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911609 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873495 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911567 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911608 | Pre-XDR-TB | lineage2.2.2 | za | ERR234590 | Pre-XDR-TB | lineage2.2.1 | ru | ERR234659 | HR-TB | None | SRR8237389 | MDR-TB | lineage2.2.2 | pg | ERR7911554 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911549 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911694 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911674 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873460 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873486 | MDR-TB | lineage2.2.2 | za | ERR7911558 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873507 | Pre-XDR-TB | lineage2.2.2 | za | ERR5917986 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873436 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515466 | MDR-TB | lineage2.2 | za | ERR1873523 | Pre-XDR-TB | lineage2.2.2 | za | ERR8975784 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975667 | XDR-TB | lineage2.2.2 | None | ERR7911586 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911644 | MDR-TB | lineage2.2.2 | za | ERR2515684 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515544 | MDR-TB | lineage2.2 | za | ERR1873504 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911696 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911562 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515725 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873494 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911648 | MDR-TB | lineage2.2.2 | za | ERR1873553 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515768 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911551 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911547 | Pre-XDR-TB | lineage2.2.2;lineage2.2.1 | za | ERR1873496 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911528 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515864 | Pre-XDR-TB | lineage2.2.2 | za | ERR6358991 | HR-TB | None | ERR7911683 | Pre-XDR-TB | lineage2.2.2 | za | ERR2516005 | Pre-XDR-TB | lineage2.2.2 | za | ERR2516019 | Pre-XDR-TB | lineage2.2 | za | ERR1873541 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873510 | Pre-XDR-TB | lineage2.2.2 | za | ERR2516066 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873536 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873529 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873542 | Pre-XDR-TB | lineage2.2.2 | za | ERR4822407 | MDR-TB | lineage2.2.1 | ua | ERR2707192 | MDR-TB | lineage4.3.4.2 | cd | ERR2653116 | Pre-XDR-TB | lineage4.8 | None | ERR2652997 | Pre-XDR-TB | lineage4.8 | None | ERR2653132 | Pre-XDR-TB | lineage4.8 | None | ERR2707013 | MDR-TB | lineage4.3.4.2 | cd | ERR2653134 | Pre-XDR-TB | lineage4.8 | None | ERR1633796 | MDR-TB | lineage2.2.2 | za | ERR3148169 | Pre-XDR-TB | lineage4.1.2.1 | mx | ERR1873520 | Pre-XDR-TB | lineage2.2.2 | za | ERR5917975 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911568 | Pre-XDR-TB | lineage2.2.2 | za | ERR5917988 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR5987416 | Pre-XDR-TB | lineage2.2.2 | None | ERR6052061 | Pre-XDR-TB | lineage2.2.2 | None | ERR9119630 | MDR-TB | lineage4.6.2.2 | None | ERR9993159 | XDR-TB | lineage2.2.2 | None | SRR16156193 | Pre-XDR-TB | lineage2.2.2 | None | SRR16156768 | MDR-TB | lineage2.2.2 | None | ERR279468 | MDR-TB | lineage2.2.2 | None | ERR1873552 | Pre-XDR-TB | lineage2.2.2 | za | ERR4830922 | Pre-XDR-TB | lineage3 | np | ERR1873533 | MDR-TB | lineage2.2.2 | za | ERR5987392 | MDR-TB | lineage2.2.2 | None | ERR7911603 | MDR-TB | lineage2.2.2 | za | ERR9992754 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975710 | Pre-XDR-TB | lineage2.2.2 | None | ERR987780 | MDR-TB | lineage4.6.1.1 | None | SRR10869238 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993224 | Pre-XDR-TB | lineage2.2.2 | None | SRR6045399 | Other | None | SRR10869181 | Pre-XDR-TB | lineage2.2.2 | None | SRR6832573 | Pre-XDR-TB | lineage4;lineage2.2.1 | None | ERR4831532 | MDR-TB | lineage2.2.2 | None | ERR4830970 | Pre-XDR-TB | lineage4.2.2.2 | np | ERR4831540 | Pre-XDR-TB | lineage2.2.2 | None | ERR4831570 | MDR-TB | lineage2.2.2 | None | ERR4831579 | Pre-XDR-TB | lineage2.2.2 | None | ERR4831569 | Pre-XDR-TB | lineage2.2.2 | None | ERR4872238 | MDR-TB | lineage4.6.2.2 | None | ERR5917999 | Pre-XDR-TB | lineage2.2.2 | za | ERR6052070 | Pre-XDR-TB | lineage2.2.2 | None | ERR9120000 | Pre-XDR-TB | lineage2.2.2 | None | ERR6052113 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911556 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911565 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911645 | Pre-XDR-TB | lineage2.2.2 | za | ERR9120087 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911573 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911595 | Pre-XDR-TB | lineage2.2.2 | za | ERR494999 | MDR-TB | lineage2.2.2 | None | SRR10869267 | MDR-TB | lineage2.2.2 | None | SRR10380209 | MDR-TB | lineage4.3.3;lineage2.2.1 | None | SRR10869249 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873498 | MDR-TB | lineage2.2.2 | za | ERR5987230 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873468 | Pre-XDR-TB | lineage2.2.2 | za | ERR5987410 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975032 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911639 | Pre-XDR-TB | lineage2.2.2 | za | ERR6362737 | MDR-TB | lineage2.2.2 | None | ERR8975026 | Pre-XDR-TB | lineage2.2.2 | None | ERR9119874 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992828 | Pre-XDR-TB | lineage2.2.2 | None | SRR16156191 | Pre-XDR-TB | lineage2.2.2 | None | SRR10869093 | Pre-XDR-TB | lineage2.2.2 | None | ERR027453 | Pre-XDR-TB | lineage4.9;lineage2.2.1 | None | SRR16156288 | Pre-XDR-TB | lineage2.2.2 | None | SRR16156292 | Pre-XDR-TB | lineage2.2.2 | None | ERR1034648 | Pre-XDR-TB | lineage2.2.2 | None | ERR067619 | Pre-XDR-TB | lineage2.2.1 | ru | ERR1023454 | Pre-XDR-TB | lineage2.2.2 | None | ERR1035038 | Pre-XDR-TB | lineage2.2.2 | za | ERR1034977 | Pre-XDR-TB | lineage2.2.2 | za | ERR1034995 | Pre-XDR-TB | lineage2.2.2 | za | ERR1035036 | MDR-TB | lineage2.2.2 | za | ERR1035077 | Pre-XDR-TB | lineage2.2.2 | za | ERR1035031 | Pre-XDR-TB | lineage2.2.2 | za | ERR1035041 | Pre-XDR-TB | lineage2.2.2 | za | ERR10680169 | MDR-TB | lineage4.8 | None | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | ERR1035306 | Pre-XDR-TB | lineage4.3.3 | br | ERR10748084 | Pre-XDR-TB | lineage2.2.2 | None | ERR10748120 | Pre-XDR-TB | lineage2.2.2 | None | ERR10748198 | Pre-XDR-TB | lineage2.2.2 | None | ERR10748121 | XDR-TB | lineage2.2.2 | None | ERR10748147 | Pre-XDR-TB | lineage2.2.2 | None | ERR10748157 | Pre-XDR-TB | lineage2.2.2 | None | ERR10748159 | Pre-XDR-TB | lineage2.2.2 | None | ERR10748199 | Pre-XDR-TB | lineage2.2.2 | None | ERR10748192 | Pre-XDR-TB | lineage2.2.2 | None | ERR10748242 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.2 | None | ERR10748257 | Pre-XDR-TB | lineage2.2.2 | None | ERR10748256 | Pre-XDR-TB | lineage2.2.2 | None | ERR137246 | MDR-TB | lineage2.2.1 | ru | ERR11044187 | MDR-TB | lineage2.2.1 | None | ERR1199131 | MDR-TB | lineage4.6.1.1 | ug | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR4011123 | Pre-XDR-TB | lineage2.2.2 | None | ERR4010978 | Pre-XDR-TB | lineage2.2.2 | None | ERR5865166 | MDR-TB | lineage4.2.1 | None | ERR4011122 | Pre-XDR-TB | lineage2.2.2 | None | ERR4423532 | MDR-TB | lineage2.2.2 | None | ERR4797110 | Pre-XDR-TB | lineage3 | in | ERR4011116 | Pre-XDR-TB | lineage2.2.2 | None | ERR5865167 | MDR-TB | lineage4.2.1 | None | ERR7911657 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873538 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911629 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873429 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873514 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911665 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911602 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873466 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873525 | Pre-XDR-TB | lineage2.2.2 | za |
---|