Rv3854c - c.752dupG


Drug resistance types
0 Sensitive 1 RR-TB 1 HR-TB 79 MDR-TB 107 Pre-XDR-TB 5 XDR-TB 0 Other
lineage Counts
lineage Count
lineage2.2.1 59
lineage2.2.1;lineage4.3.4.2 1
lineage4.3.3 35
lineage4.3.4.2 6
lineage4.8 14
lineage4.1.2.1 15
lineage4.1.1 1
lineage4 2
lineage4.1.1.3 3
lineage4.5 2
lineage4.2.2.2 3
lineage4.7 2
lineage4.3.4.1 2
lineage4.2.1 1
lineage2.2.1.1 14
lineage4.4.1.1.1 2
lineage4.8.1 7
lineage2.2.1;lineage4.3.3 2
lineage2.2.2 3
lineage3.1.2 3
lineage2.1 2
lineage4.1.3 2
lineage4.4.1 1
lineage3 4
lineage4.3.2 2
lineage4.1.2.1.1 1
lineage4.4.1.1 2
lineage4.9.1 1
lineage4.9 1
spoligotype Counts
spoligotype Count
None 193
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR12062550 Pre-XDR-TB lineage2.2.1 None
SRR16915764 MDR-TB lineage2.2.1;lineage4.3.4.2 None
ERR4813116 Pre-XDR-TB lineage4.3.3 None
ERR5865119 MDR-TB lineage2.2.1 None
ERR3287312 Pre-XDR-TB lineage4.3.4.2 pe
DRR130173 Pre-XDR-TB lineage2.2.1 None
SRR1173443 Pre-XDR-TB lineage4.8 None
SRR1166321 Pre-XDR-TB lineage4.8 ro
SRR13232466 MDR-TB lineage4.3.3 None
SRR6824559 MDR-TB lineage2.2.1 cn
ERR9806986 MDR-TB lineage2.2.1 None
SRR21776295 Pre-XDR-TB lineage4.3.3 None
ERR3287842 MDR-TB lineage4.1.2.1 pe
ERR2516703 MDR-TB lineage4.1.1 nl
ERR6866793 MDR-TB lineage4.3.3 None
SRR29273760 MDR-TB lineage4.1.2.1 None
SRR11241400 Pre-XDR-TB lineage4.3.3 None
SRR28119796 Pre-XDR-TB lineage2.2.1 None
SRR28394207 MDR-TB lineage4 None
SRR28393256 RR-TB lineage4.1.1.3 None
SRR22461649 MDR-TB lineage4.3.3 None
SRR22461708 MDR-TB lineage4.3.3 None
SRR23691417 Pre-XDR-TB lineage4.5 None
ERR4831006 Pre-XDR-TB lineage4.2.2.2 np
SRR5486901 MDR-TB lineage4.1.2.1 None
SRR28393809 MDR-TB lineage4.3.3 None
SRR1163337 Pre-XDR-TB lineage4.3.3 None
SRR5266558 Pre-XDR-TB lineage4.3.3 ru
ERR4796276 Pre-XDR-TB lineage2.2.1 None
ERR4810622 XDR-TB lineage2.2.1 cn
ERR4972486 MDR-TB lineage4.3.3 None
ERR2041701 MDR-TB lineage4.7 None
SRR28393594 Pre-XDR-TB lineage2.2.1 None
ERR2516493 MDR-TB lineage4.3.4.1 pe
ERR5865989 MDR-TB lineage4.2.1 None
ERR4796629 Pre-XDR-TB lineage2.2.1.1 in
ERR4830478 MDR-TB lineage4.4.1.1.1 None
ERR7162983 Pre-XDR-TB lineage2.2.1.1 None
SRR1172749 Pre-XDR-TB lineage4.8.1 None
SRR12080285 MDR-TB lineage2.2.1 None
ERR11083061 MDR-TB lineage4.1.2.1 None
ERR108431 MDR-TB lineage2.2.1;lineage4.3.3 None
SRR29093922 MDR-TB lineage2.2.1 None
SRR11662552 MDR-TB lineage2.2.1 None
SRR1173248 Pre-XDR-TB lineage4.8 None
SRR1723685 Pre-XDR-TB lineage2.2.1.1 cn
SRR25207110 XDR-TB lineage2.2.1 None
ERR5865118 MDR-TB lineage2.2.1 None
ERR2516572 Pre-XDR-TB lineage4.3.4.2 pe
SRR1165276 Pre-XDR-TB lineage4.8 None
SRR29273981 Pre-XDR-TB lineage4.1.2.1 None
ERR13195575 Pre-XDR-TB lineage2.2.2 None
ERR4796559 Pre-XDR-TB lineage2.2.1 in
ERR4799481 Pre-XDR-TB lineage3.1.2 in
SRR9738549 Pre-XDR-TB lineage4.1.2.1 None
ERR4796853 Pre-XDR-TB lineage2.2.1 in
SRR10040392 Pre-XDR-TB lineage2.1 None
SRR13232771 Pre-XDR-TB lineage4.3.3 None
ERR3148215 Pre-XDR-TB lineage4.1.1.3 mx
SRR1173120 Pre-XDR-TB lineage4.8.1 None
SRR12080282 MDR-TB lineage2.2.1 None
SRR13232467 Pre-XDR-TB lineage4.3.3 None
ERR2516696 Pre-XDR-TB lineage4.3.4.2 pe
SAMN02403509 Pre-XDR-TB lineage4.8 za
ERR4813180 Pre-XDR-TB lineage2.2.1;lineage4.3.3 pe
ERR4011078 MDR-TB lineage2.2.1 None
SRR6832732 Pre-XDR-TB lineage4.3.3 None
SRR6824305 Pre-XDR-TB lineage2.2.1.1 cn
SRR12080287 MDR-TB lineage2.2.1 None
SRR1196497 Pre-XDR-TB lineage4.8.1 None
ERR6879041 MDR-TB lineage4.1.2.1 None
SRR29274125 MDR-TB lineage4.1.2.1 None
ERR11044376 HR-TB lineage4.3.3 None
ERR279635 Pre-XDR-TB lineage2.2.1.1 None
SRR25827443 Pre-XDR-TB lineage2.2.1.1 None
SRR18593215 Pre-XDR-TB lineage4.8 None
SRR12080290 MDR-TB lineage2.2.1 None
SRR29289373 XDR-TB lineage2.2.1 None
ERR4423489 Pre-XDR-TB lineage4.1.3 None
SRR18002906 Pre-XDR-TB lineage2.2.1 None
SRR6824358 Pre-XDR-TB lineage2.2.1 cn
SRR10040355 Pre-XDR-TB lineage2.2.1 None
SRR6824313 Pre-XDR-TB lineage2.2.1.1 cn
SRR9738493 Pre-XDR-TB lineage4.8 None
SRR12080291 MDR-TB lineage2.2.1 None
ERR5865116 MDR-TB lineage2.2.1 None
ERR8774231 Pre-XDR-TB lineage4.1.3 None
SRR28393968 MDR-TB lineage4.3.3 None
SRR28393326 Pre-XDR-TB lineage4.3.4.2 None
ERR7911200 MDR-TB lineage4.8.1 za
SRR29681224 MDR-TB lineage2.2.1 None
ERR4798426 Pre-XDR-TB lineage2.2.1 in
ERR4799267 XDR-TB lineage2.2.1.1 in
ERR4800380 Pre-XDR-TB lineage2.2.1.1 in
ERR4811128 Pre-XDR-TB lineage2.2.1 cn
SRR7592386 Pre-XDR-TB lineage4.8 None
SRR12062551 Pre-XDR-TB lineage2.2.1 None
SRR29093369 MDR-TB lineage2.2.1 None
SRR28393689 MDR-TB lineage4 None
ERR1034810 Pre-XDR-TB lineage4.8 pt
SRR24256225 MDR-TB lineage4.3.3 None
ERR4812817 MDR-TB lineage4.1.1.3 None
ERR7911174 Pre-XDR-TB lineage2.2.1 vn
ERR11081816 MDR-TB lineage4.3.3 None
ERR11043205 MDR-TB lineage4.3.3 None
SRR29539244 MDR-TB lineage2.2.1 None
ERR13266484 Pre-XDR-TB lineage2.2.1 None
ERR3287729 MDR-TB lineage4.3.3 pe
ERR4972492 MDR-TB lineage4.3.3 None
ERR4813130 Pre-XDR-TB lineage4.3.3 None
ERR5917704 MDR-TB lineage2.2.1 by
SRR12080289 MDR-TB lineage2.2.1 None
ERR4813875 MDR-TB lineage4.4.1 None
ERR1035023 MDR-TB lineage2.2.1 za
SRR6824314 Pre-XDR-TB lineage2.2.1.1 cn
SRR18054798 Pre-XDR-TB lineage2.2.1 None
SRR28393364 XDR-TB lineage4.3.3 None
SRR13232500 Pre-XDR-TB lineage4.3.3 None
SRR11662329 Pre-XDR-TB lineage2.2.1 None
ERR11552011 MDR-TB lineage4.1.2.1 None
SRR1169103 Pre-XDR-TB lineage4.3.3 None
SRR16915749 MDR-TB lineage4.3.4.2 None
ERR4813038 MDR-TB lineage4.1.2.1 pe
ERR2510730 Pre-XDR-TB lineage4.8 it
SRR26937058 MDR-TB lineage2.2.1 None
SRR25827537 Pre-XDR-TB lineage2.2.1.1 None
SRR29289332 Pre-XDR-TB lineage3 None
ERR2653097 Pre-XDR-TB lineage4.3.3 None
SRR7592364 Pre-XDR-TB lineage4.8 None
SRR1184340 Pre-XDR-TB lineage4.8.1 None
SRR12080283 MDR-TB lineage2.2.1 None
SRR1723568 MDR-TB lineage2.2.1 cn
SRR28394013 MDR-TB lineage4.3.3 None
SRR9971049 MDR-TB lineage4.4.1.1.1 None
SRR29539707 Pre-XDR-TB lineage2.2.1 None
SAMN02586019 Pre-XDR-TB lineage4.8.1 za
SRR6832399 MDR-TB lineage2.2.1 None
ERR4810473 Pre-XDR-TB lineage2.2.1 cn
ERR1034785 MDR-TB lineage4.1.2.1 pe
ERR4827953 MDR-TB lineage2.2.1 None
SRR25207056 Pre-XDR-TB lineage2.1 None
ERR4813734 MDR-TB lineage4.3.3 None
ERR1633939 Pre-XDR-TB lineage2.2.1.1 za
SRR28393365 Pre-XDR-TB lineage4.3.3 None
ERR751593 Pre-XDR-TB lineage4.3.4.2 pe
SRR29539840 Pre-XDR-TB lineage2.2.1 None
SRR29772391 Pre-XDR-TB lineage4.8 None
ERR2510397 MDR-TB lineage4.5 pk
SRR28467041 Pre-XDR-TB lineage2.2.2 None
ERR2513160 Pre-XDR-TB lineage3 gb
SRR12142377 Pre-XDR-TB lineage2.2.1 None
SRR12062548 Pre-XDR-TB lineage2.2.1 None
ERR2516451 MDR-TB lineage4.1.2.1 pe
ERR495166 Pre-XDR-TB lineage2.2.1.1 None
SRR15316584 MDR-TB lineage2.2.1 None
SRR10808670 Pre-XDR-TB lineage4.3.2 None
ERR3287841 MDR-TB lineage4.1.2.1 pe
ERR4797858 Pre-XDR-TB lineage2.2.1 in
ERR760791 MDR-TB lineage4.1.2.1.1 ar
SRR22873599 Pre-XDR-TB lineage2.2.2 None
ERR4896324 MDR-TB lineage2.2.1 None
ERR552083 MDR-TB lineage4.4.1.1 sz
SRR16370636 Pre-XDR-TB lineage2.2.1 None
ERR4831002 Pre-XDR-TB lineage4.2.2.2 np
SRR28394036 MDR-TB lineage4.3.4.1 None
ERR4797145 Pre-XDR-TB lineage4.2.2.2 in
ERR1034809 Pre-XDR-TB lineage4.8 pt
SRR10040318 Pre-XDR-TB lineage2.2.1 None
SRR9588009 MDR-TB lineage4.4.1.1 None
SRR7070080 Pre-XDR-TB lineage3 None
ERR2041702 MDR-TB lineage4.7 None
ERR4809159 Pre-XDR-TB lineage4.8.1 za
ERR5917669 Pre-XDR-TB lineage4.3.3 by
SRR1723688 Pre-XDR-TB lineage2.2.1.1 cn
ERR1035007 MDR-TB lineage2.2.1 za
ERR2515528 MDR-TB lineage4.9.1 za
ERR2516527 Pre-XDR-TB lineage4.3.3 None
ERR776664 MDR-TB lineage4.3.2 None
ERR3287845 Pre-XDR-TB lineage4.1.2.1 pe
SRR29273938 Pre-XDR-TB lineage4.1.2.1 None
SRR6257029 MDR-TB lineage2.2.1 ru
ERR13266753 Pre-XDR-TB lineage3.1.2 None
ERR13284363 MDR-TB lineage4.3.3 None
ERR5865117 MDR-TB lineage2.2.1 None
ERR4799091 Pre-XDR-TB lineage4.3.3 in
SRR1167294 Pre-XDR-TB lineage4.8 None
ERR4819736 Pre-XDR-TB lineage3 gb
SRR1163089 Pre-XDR-TB lineage4.3.3 None
DRR130193 Pre-XDR-TB lineage4.9 None
SRR25207094 Pre-XDR-TB lineage2.2.1 None
SRR1172162 Pre-XDR-TB lineage4.3.3 None
SRR12080286 MDR-TB lineage2.2.1 None
SRR28046127 MDR-TB lineage3.1.2 None