Rv3854c - c.752dupG


Drug resistance types
0 Sensitive 0 RR-TB 1 HR-TB 35 MDR-TB 59 Pre-XDR-TB 1 XDR-TB 0 Other
lineage Counts
lineage Count
lineage2.2.1.1 13
lineage4.3.3 17
lineage4.5 2
lineage2.2.1 21
lineage4.8.1 4
lineage4.4.1.1.1 1
lineage4.2.2.2 3
lineage4.3.2 3
lineage4.8 6
lineage4.1.2.1 6
lineage4.9 1
lineage4.3.3;lineage2.2.1 2
lineage4.3.4.2 4
lineage4.1.3 1
lineage3.1.2 1
lineage4.4.1.1 1
lineage4.4 1
lineage4.1.1.3 2
lineage4.7 1
lineage3 2
lineage4.3.4.1 1
lineage4.9.1 1
lineage4.1.2.1.1 1
lineage4.1.1 1
spoligotype Counts
spoligotype Count
None 96
Geographic prevalence
Country level data for this variant is available for 64 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6824313 Pre-XDR-TB lineage2.2.1.1 cn
ERR2653070 MDR-TB lineage4.3.3 None
ERR2653097 Pre-XDR-TB lineage4.3.3 None
SRR5266558 Pre-XDR-TB lineage4.3.3 ru
SRR23691417 Pre-XDR-TB lineage4.5 None
ERR4827953 MDR-TB lineage2.2.1 None
ERR7911200 MDR-TB lineage4.8.1 za
SRR13232771 Pre-XDR-TB lineage4.3.3 None
SRR1723684 Pre-XDR-TB lineage2.2.1.1 cn
ERR4830478 MDR-TB lineage4.4.1.1.1 None
ERR279635 Pre-XDR-TB lineage2.2.1.1 None
ERR495166 Pre-XDR-TB lineage2.2.1.1 None
SRR12080287 MDR-TB lineage2.2.1 None
ERR4831006 Pre-XDR-TB lineage4.2.2.2 np
ERR4831002 Pre-XDR-TB lineage4.2.2.2 np
ERR4972492 MDR-TB lineage4.3.3 None
ERR4972486 MDR-TB lineage4.3.3 None
SRR12080285 MDR-TB lineage2.2.1 None
ERR776664 MDR-TB lineage4.3.2 None
SRR10808670 Pre-XDR-TB lineage4.3.2 None
SRR1173120 Pre-XDR-TB lineage4.8.1 None
SRR1173443 Pre-XDR-TB lineage4.8 None
SRR18054798 Pre-XDR-TB lineage2.2.1 None
ERR1034785 MDR-TB lineage4.1.2.1 pe
DRR130193 Pre-XDR-TB lineage4.9 None
DRR130173 Pre-XDR-TB lineage2.2.1 None
ERR1034810 Pre-XDR-TB lineage4.8 pt
ERR1035023 MDR-TB lineage2.2.1 za
ERR1034809 Pre-XDR-TB lineage4.8 pt
ERR1035007 MDR-TB lineage2.2.1 za
ERR108431 MDR-TB lineage4.3.3;lineage2.2.1 None
ERR4011078 MDR-TB lineage2.2.1 None
ERR11043205 MDR-TB lineage4.3.3 None
ERR3287312 Pre-XDR-TB lineage4.3.4.2 pe
ERR3287729 MDR-TB lineage4.3.3 pe
ERR3287842 MDR-TB lineage4.1.2.1 pe
ERR11044376 HR-TB lineage4.3.3 None
ERR3287841 MDR-TB lineage4.1.2.1 pe
ERR3287845 Pre-XDR-TB lineage4.1.2.1 pe
ERR4423489 Pre-XDR-TB lineage4.1.3 None
ERR4796629 Pre-XDR-TB lineage2.2.1.1 in
ERR4796559 Pre-XDR-TB lineage2.2.1 in
ERR4797858 Pre-XDR-TB lineage2.2.1 in
ERR4797145 Pre-XDR-TB lineage4.2.2.2 in
ERR4796853 Pre-XDR-TB lineage2.2.1 in
ERR4798426 Pre-XDR-TB lineage2.2.1 in
ERR4799481 Pre-XDR-TB lineage3.1.2 in
ERR4799091 Pre-XDR-TB lineage4.3.3 in
ERR4799267 XDR-TB lineage2.2.1.1 in
ERR552083 MDR-TB lineage4.4.1.1 sz
ERR4800380 Pre-XDR-TB lineage2.2.1.1 in
ERR4810622 Pre-XDR-TB lineage2.2.1 cn
ERR4813734 MDR-TB lineage4.3.3 None
ERR1633939 Pre-XDR-TB lineage2.2.1.1 za
SRR6824314 Pre-XDR-TB lineage2.2.1.1 cn
ERR4809159 Pre-XDR-TB lineage4.8.1 za
ERR4810473 Pre-XDR-TB lineage2.2.1 cn
ERR4811128 Pre-XDR-TB lineage2.2.1 cn
ERR4813875 MDR-TB lineage4.4 None
ERR4812817 MDR-TB lineage4.1.1.3 None
SRR6824559 MDR-TB lineage2.2.1 cn
ERR4813116 Pre-XDR-TB lineage4.3.3 None
ERR4813038 MDR-TB lineage4.1.2.1 pe
ERR5917704 MDR-TB lineage2.2.1 by
ERR4813130 Pre-XDR-TB lineage4.3.3 None
ERR4813662 MDR-TB lineage4.3.3 None
ERR4813180 Pre-XDR-TB lineage4.3.3;lineage2.2.1 pe
SAMN02419645 Pre-XDR-TB lineage4.3.3 by
ERR5917669 Pre-XDR-TB lineage4.3.3 by
ERR2041702 MDR-TB lineage4.7 None
SRR1723568 MDR-TB lineage2.2.1 cn
SRR1723688 Pre-XDR-TB lineage2.2.1.1 cn
ERR2184354 Pre-XDR-TB lineage4.3.2 pe
ERR2513160 Pre-XDR-TB lineage3 gb
SAMN02403509 Pre-XDR-TB lineage4.8 za
ERR3148215 Pre-XDR-TB lineage4.1.1.3 mx
SRR6257029 MDR-TB lineage2.2.1 ru
ERR2510730 Pre-XDR-TB lineage4.8 it
SRR6824305 Pre-XDR-TB lineage2.2.1.1 cn
SRR1723686 MDR-TB lineage2.2.1.1 cn
ERR2516493 MDR-TB lineage4.3.4.1 pe
SRR1723685 Pre-XDR-TB lineage2.2.1.1 cn
ERR2510397 MDR-TB lineage4.5 pk
ERR7911174 Pre-XDR-TB lineage2.2.1 vn
ERR2515528 Pre-XDR-TB lineage4.9.1 za
ERR2516451 MDR-TB lineage4.1.2.1 pe
SAMN02586019 Pre-XDR-TB lineage4.8.1 za
ERR4819736 Pre-XDR-TB lineage3 gb
ERR2516527 Pre-XDR-TB lineage4.3.3 None
ERR760791 MDR-TB lineage4.1.2.1.1 ar
ERR2516572 Pre-XDR-TB lineage4.3.4.2 pe
SRR1166321 Pre-XDR-TB lineage4.8 ro
ERR751593 Pre-XDR-TB lineage4.3.4.2 pe
ERR2516703 MDR-TB lineage4.1.1 nl
SRR6824358 Pre-XDR-TB lineage2.2.1 cn
ERR2516696 Pre-XDR-TB lineage4.3.4.2 pe