Rv3854c - c.752dupG


Drug resistance types
0 Sensitive 0 RR-TB 1 HR-TB 62 MDR-TB 80 Pre-XDR-TB 1 XDR-TB 0 Other
lineage Counts
lineage Count
lineage4.1.2.1.1 1
lineage4.8.1 7
lineage4.3.4.2 5
lineage4.8 12
lineage2.2.1 43
lineage4.3.3 21
lineage4.1.2.1 12
lineage4.1.1.3 2
lineage4.1.1 1
lineage4.4.1.1.1 2
lineage4.3.4.1 1
lineage2.2.1.1 13
lineage4.2.2.2 3
lineage3.1.2 1
lineage4.3.3;lineage2.2.1 2
lineage4.5 2
lineage4.3.2 3
lineage3 2
lineage4.9 1
lineage4.9.1 1
lineage4.1.3 2
lineage4.2.1 1
lineage4.3.4.2;lineage2.2.1 1
lineage2.1 1
lineage2.2.2 1
lineage4.4 1
lineage4.4.1.1 1
lineage4.7 1
spoligotype Counts
spoligotype Count
None 144
Geographic prevalence
Country level data for this variant is available for 63 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR760791 MDR-TB lineage4.1.2.1.1 ar
SAMN02586019 Pre-XDR-TB lineage4.8.1 za
ERR751593 Pre-XDR-TB lineage4.3.4.2 pe
ERR7911200 MDR-TB lineage4.8.1 za
SAMN02403509 Pre-XDR-TB lineage4.8 za
SRR1166321 Pre-XDR-TB lineage4.8 ro
ERR7911174 Pre-XDR-TB lineage2.2.1 vn
ERR2516527 Pre-XDR-TB lineage4.3.3 None
SRR5486901 MDR-TB lineage4.1.2.1 None
SRR5266558 Pre-XDR-TB lineage4.3.3 ru
ERR2653070 MDR-TB lineage4.3.3 None
ERR2653097 Pre-XDR-TB lineage4.3.3 None
ERR3148215 Pre-XDR-TB lineage4.1.1.3 mx
ERR4827953 MDR-TB lineage2.2.1 None
ERR2516703 MDR-TB lineage4.1.1 nl
ERR4797858 Pre-XDR-TB lineage2.2.1 in
ERR4830478 MDR-TB lineage4.4.1.1.1 None
ERR2516572 Pre-XDR-TB lineage4.3.4.2 pe
ERR2516493 MDR-TB lineage4.3.4.1 pe
ERR2516451 MDR-TB lineage4.1.2.1 pe
ERR4796559 Pre-XDR-TB lineage2.2.1 in
ERR2516696 Pre-XDR-TB lineage4.3.4.2 pe
ERR4796629 Pre-XDR-TB lineage2.2.1.1 in
ERR4798426 Pre-XDR-TB lineage2.2.1 in
ERR4799267 XDR-TB lineage2.2.1.1 in
ERR279635 Pre-XDR-TB lineage2.2.1.1 None
ERR4799091 Pre-XDR-TB lineage4.3.3 in
ERR4796853 Pre-XDR-TB lineage2.2.1 in
ERR4810622 Pre-XDR-TB lineage2.2.1 cn
ERR4797145 Pre-XDR-TB lineage4.2.2.2 in
ERR1633939 Pre-XDR-TB lineage2.2.1.1 za
ERR4831002 Pre-XDR-TB lineage4.2.2.2 np
ERR4811128 Pre-XDR-TB lineage2.2.1 cn
ERR4810473 Pre-XDR-TB lineage2.2.1 cn
ERR4831006 Pre-XDR-TB lineage4.2.2.2 np
ERR2510730 Pre-XDR-TB lineage4.8 it
ERR4799481 Pre-XDR-TB lineage3.1.2 in
ERR4800380 Pre-XDR-TB lineage2.2.1.1 in
ERR495166 Pre-XDR-TB lineage2.2.1.1 None
ERR4972492 MDR-TB lineage4.3.3 None
ERR4972486 MDR-TB lineage4.3.3 None
ERR5917704 MDR-TB lineage2.2.1 by
ERR4813038 MDR-TB lineage4.1.2.1 pe
ERR3287729 MDR-TB lineage4.3.3 pe
SRR6832399 MDR-TB lineage2.2.1 None
SRR6832732 Pre-XDR-TB lineage4.3.3 None
ERR5917669 Pre-XDR-TB lineage4.3.3 by
ERR4813180 Pre-XDR-TB lineage4.3.3;lineage2.2.1 pe
ERR3287845 Pre-XDR-TB lineage4.1.2.1 pe
ERR3287841 MDR-TB lineage4.1.2.1 pe
ERR3287312 Pre-XDR-TB lineage4.3.4.2 pe
ERR3287842 MDR-TB lineage4.1.2.1 pe
SRR9738549 Pre-XDR-TB lineage4.1.2.1 None
ERR2510397 MDR-TB lineage4.5 pk
SRR9738493 Pre-XDR-TB lineage4.8 None
ERR2184354 Pre-XDR-TB lineage4.3.2 pe
SRR7592386 Pre-XDR-TB lineage4.8 None
ERR4819736 Pre-XDR-TB lineage3 gb
SRR9971049 MDR-TB lineage4.4.1.1.1 None
DRR130193 Pre-XDR-TB lineage4.9 None
DRR130173 Pre-XDR-TB lineage2.2.1 None
ERR11044376 HR-TB lineage4.3.3 None
ERR108431 MDR-TB lineage4.3.3;lineage2.2.1 None
ERR11043205 MDR-TB lineage4.3.3 None
ERR2515528 MDR-TB lineage4.9.1 za
ERR2513160 Pre-XDR-TB lineage3 gb
ERR12117947 MDR-TB lineage4.1.2.1 None
ERR4011078 MDR-TB lineage2.2.1 None
ERR4423489 Pre-XDR-TB lineage4.1.3 None
ERR5865118 MDR-TB lineage2.2.1 None
ERR4809159 Pre-XDR-TB lineage4.8.1 za
SRR16915749 MDR-TB lineage4.3.4.2 None
ERR5865117 MDR-TB lineage2.2.1 None
ERR5865119 MDR-TB lineage2.2.1 None
ERR5865989 MDR-TB lineage4.2.1 None
ERR5865116 MDR-TB lineage2.2.1 None
ERR7162983 Pre-XDR-TB lineage2.2.1.1 None
ERR6866793 MDR-TB lineage4.3.3 None
ERR6879041 MDR-TB lineage4.1.2.1 None
ERR776664 MDR-TB lineage4.3.2 None
SRR16915764 MDR-TB lineage4.3.4.2;lineage2.2.1 None
SRR21776295 Pre-XDR-TB lineage4.3.3 None
SRR10808670 Pre-XDR-TB lineage4.3.2 None
SRR11662329 Pre-XDR-TB lineage2.2.1 None
ERR8774231 Pre-XDR-TB lineage4.1.3 None
SRR11662552 MDR-TB lineage2.2.1 None
SRR1172749 Pre-XDR-TB lineage4.8.1 None
SRR1165276 Pre-XDR-TB lineage4.8 None
SRR1167294 Pre-XDR-TB lineage4.8 None
SRR1173120 Pre-XDR-TB lineage4.8.1 None
SRR1173248 Pre-XDR-TB lineage4.8 None
SRR12080287 MDR-TB lineage2.2.1 None
SRR1173443 Pre-XDR-TB lineage4.8 None
SRR1184340 Pre-XDR-TB lineage4.8.1 None
SRR12080285 MDR-TB lineage2.2.1 None
SRR1196497 Pre-XDR-TB lineage4.8.1 None
SRR12080286 MDR-TB lineage2.2.1 None
SRR12080282 MDR-TB lineage2.2.1 None
SRR12080290 MDR-TB lineage2.2.1 None
SRR12080283 MDR-TB lineage2.2.1 None
SRR12080289 MDR-TB lineage2.2.1 None
SRR12080291 MDR-TB lineage2.2.1 None
SRR12142377 Pre-XDR-TB lineage2.2.1 None
SRR18002906 Pre-XDR-TB lineage2.2.1 None
SRR16370636 Pre-XDR-TB lineage2.2.1 None
SRR13232771 Pre-XDR-TB lineage4.3.3 None
SRR15316584 MDR-TB lineage2.2.1 None
SRR18054798 Pre-XDR-TB lineage2.2.1 None
SRR18593215 Pre-XDR-TB lineage4.8 None
SRR25207110 Pre-XDR-TB lineage2.2.1 None
SRR25207056 Pre-XDR-TB lineage2.1 None
ERR11083061 MDR-TB lineage4.1.2.1 None
SRR24256225 MDR-TB lineage4.3.3 None
ERR9806986 MDR-TB lineage2.2.1 None
ERR4896324 MDR-TB lineage2.2.1 None
SRR22873599 Pre-XDR-TB lineage2.2.2 None
ERR11552011 MDR-TB lineage4.1.2.1 None
SRR26937058 MDR-TB lineage2.2.1 None
SRR25207094 Pre-XDR-TB lineage2.2.1 None
ERR4813734 MDR-TB lineage4.3.3 None
SRR1723568 MDR-TB lineage2.2.1 cn
SRR23691417 Pre-XDR-TB lineage4.5 None
SRR1723688 Pre-XDR-TB lineage2.2.1.1 cn
ERR4813875 MDR-TB lineage4.4 None
SRR1723685 Pre-XDR-TB lineage2.2.1.1 cn
SRR1723684 Pre-XDR-TB lineage2.2.1.1 cn
ERR4812817 MDR-TB lineage4.1.1.3 None
ERR552083 MDR-TB lineage4.4.1.1 sz
SRR6824313 Pre-XDR-TB lineage2.2.1.1 cn
ERR4813116 Pre-XDR-TB lineage4.3.3 None
SRR6824358 Pre-XDR-TB lineage2.2.1 cn
SRR6824559 MDR-TB lineage2.2.1 cn
ERR4813130 Pre-XDR-TB lineage4.3.3 None
SRR6824305 Pre-XDR-TB lineage2.2.1.1 cn
ERR1034785 MDR-TB lineage4.1.2.1 pe
ERR4813662 MDR-TB lineage4.3.3 None
ERR2041702 MDR-TB lineage4.7 None
SRR6824314 Pre-XDR-TB lineage2.2.1.1 cn
ERR1035007 MDR-TB lineage2.2.1 za
ERR1034810 Pre-XDR-TB lineage4.8 pt
ERR1034809 Pre-XDR-TB lineage4.8 pt
SAMN02419645 Pre-XDR-TB lineage4.3.3 by
ERR1035023 MDR-TB lineage2.2.1 za
SRR6257029 MDR-TB lineage2.2.1 ru