Rv3854c - p.Cys137Arg
Drug resistance types
0 Sensitive
0 RR-TB
21 HR-TB
88 MDR-TB
65 Pre-XDR-TB
4 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 12 |
| lineage2.2.1 | 120 |
| lineage4.8 | 2 |
| lineage4.2.1.1 | 6 |
| lineage2.2.1;lineage4.4.2 | 1 |
| lineage4.3.3 | 10 |
| lineage4.5 | 4 |
| lineage3.1 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage1.1.2 | 1 |
| lineage4.8.1 | 1 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage4.3.4.2 | 4 |
| lineage4.2.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.3 | 2 |
| lineage2.2.1;lineage4.2.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2.1 | 5 |
| lineage2.1 | 2 |
| lineage7 | 1 |
| lineage4.3.2.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 180 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2510633 | Pre-XDR-TB | lineage3 | None | ERR11080937 | MDR-TB | lineage3 | None | SRR10040165 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266859 | Pre-XDR-TB | lineage2.2.1 | None | ERR551232 | HR-TB | lineage2.2.1 | de | ERR11083055 | XDR-TB | lineage2.2.1 | None | ERR4872356 | MDR-TB | lineage2.2.1 | None | ERR9806651 | Other | lineage4.8 | None | ERR5864554 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864556 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276014 | HR-TB | lineage4.2.1.1 | None | SRR5153837 | MDR-TB | lineage2.2.1 | None | ERR5864552 | MDR-TB | lineage2.2.1 | None | SAMN03246590 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4872348 | MDR-TB | lineage2.2.1 | None | ERR5864508 | MDR-TB | lineage2.2.1 | None | SRR10040215 | Pre-XDR-TB | lineage2.2.1;lineage4.4.2 | None | SRR24710239 | MDR-TB | lineage2.2.1 | None | SRR16088436 | Pre-XDR-TB | lineage2.2.1 | None | ERR108500 | MDR-TB | lineage2.2.1 | ru | SRR1163146 | MDR-TB | lineage3 | None | ERR11798555 | Pre-XDR-TB | lineage2.2.1 | None | SRR10397135 | HR-TB | lineage2.2.1 | None | ERR5864551 | MDR-TB | lineage2.2.1 | None | SRR6257053 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866020 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488870 | MDR-TB | lineage4.3.3 | None | SRR3544726 | HR-TB | lineage2.2.1 | None | ERR5864513 | Pre-XDR-TB | lineage2.2.1 | None | SRR1144789 | MDR-TB | lineage3 | None | ERR5864555 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865370 | MDR-TB | lineage2.2.1 | None | SRR14782552 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799471 | Pre-XDR-TB | lineage2.2.1 | in | ERR403215 | MDR-TB | lineage2.2.1 | None | ERR5864557 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865394 | MDR-TB | lineage2.2.1 | None | ERR5865493 | MDR-TB | lineage2.2.1 | None | SRR28351615 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864510 | MDR-TB | lineage2.2.1 | None | ERR5864516 | MDR-TB | lineage2.2.1 | None | ERR5865451 | MDR-TB | lineage2.2.1 | None | SRR28239805 | HR-TB | lineage2.2.1 | None | ERR3335744 | Pre-XDR-TB | lineage4.5 | pk | ERR2600595 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798517 | MDR-TB | lineage3.1 | in | ERR5864517 | MDR-TB | lineage2.2.1 | None | SRR16058302 | MDR-TB | lineage3 | None | ERR228066 | HR-TB | lineage2.2.1 | ru | ERR2307416 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799370 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | None | ERR4830662 | Pre-XDR-TB | lineage2.2.1 | np | ERR5865941 | MDR-TB | lineage2.2.1 | None | SRR10397103 | HR-TB | lineage2.2.1 | None | SRR28045865 | HR-TB | lineage1.1.2 | None | ERR10762473 | MDR-TB | lineage2.2.1 | None | ERR4818698 | HR-TB | lineage2.2.1 | gb | ERR5864515 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864553 | MDR-TB | lineage2.2.1 | None | SRR1723873 | Pre-XDR-TB | lineage2.2.1 | None | SRR28239781 | HR-TB | lineage2.2.1 | None | ERR5865991 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773710 | MDR-TB | lineage4.8.1 | None | ERR13284756 | MDR-TB | lineage2.2.1 | None | ERR11488537 | MDR-TB | lineage4.3.3 | None | ERR13261392 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864511 | MDR-TB | lineage2.2.1 | None | ERR11488801 | MDR-TB | lineage4.3.3 | None | ERR11488626 | MDR-TB | lineage4.3.3 | None | SRR21887757 | Pre-XDR-TB | lineage2.2.1 | None | ERR10610215 | Other | lineage4.8 | None | SRR25827813 | XDR-TB | lineage2.2.1 | None | SRR6458389 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832510 | HR-TB | lineage4.2.1.1 | None | ERR4796781 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799491 | Pre-XDR-TB | lineage2.2.1 | in | ERR4830913 | Pre-XDR-TB | lineage2.2.1 | np | SRR1163051 | MDR-TB | lineage3 | None | ERR4811335 | Pre-XDR-TB | lineage2.2.1 | cn | SRR5153840 | HR-TB | lineage2.2.1;lineage4.3.3 | None | SRR6824595 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2706985 | MDR-TB | lineage4.3.4.2 | cd | ERR3335733 | Pre-XDR-TB | lineage4.5 | pk | SRR8651658 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2307424 | Pre-XDR-TB | lineage2.2.1 | None | SRR28239558 | MDR-TB | lineage2.2.1 | None | SAMN02584594 | MDR-TB | lineage2.2.1 | md | ERR1023395 | HR-TB | lineage2.2.1 | None | ERR5865395 | MDR-TB | lineage2.2.1 | None | ERR5866117 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824637 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2179745 | HR-TB | lineage4.2.2 | None | SRR1146416 | MDR-TB | lineage3 | None | ERR11488632 | MDR-TB | lineage4.3.3 | None | SRR3544748 | MDR-TB | lineage2.2.1 | None | ERR5863693 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796333 | Pre-XDR-TB | lineage4.2.2.2 | in | SAMN02584593 | MDR-TB | lineage2.2.1 | md | ERR5865453 | MDR-TB | lineage2.2.1 | None | ERR4798130 | Pre-XDR-TB | lineage3 | in | ERR5865396 | MDR-TB | lineage2.2.1 | None | ERR11488582 | MDR-TB | lineage4.3.3 | None | ERR4796872 | Pre-XDR-TB | lineage2.2.1 | in | SRR1166107 | MDR-TB | lineage2.2.1 | None | SRR1166085 | MDR-TB | lineage2.2.1 | None | ERR137206 | MDR-TB | lineage2.2.1 | ru | SRR5535723 | MDR-TB | lineage4.1.3 | None | ERR4798268 | Pre-XDR-TB | lineage2.2.1 | in | SRR10380142 | MDR-TB | lineage2.2.1 | None | ERR7911752 | MDR-TB | lineage2.2.1 | us | SRR6485120 | MDR-TB | lineage2.2.1 | None | ERR4814782 | HR-TB | lineage2.2.1 | None | ERR403264 | HR-TB | lineage2.2.1 | None | SRR1169006 | MDR-TB | lineage2.2.1 | None | ERR5865393 | MDR-TB | lineage2.2.1 | None | SRR6484981 | HR-TB | lineage4.2.1.1 | None | SRR10305993 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715333 | MDR-TB | lineage2.2.1;lineage4.2.1.1 | None | SRR6257086 | MDR-TB | lineage4.2.1.1 | ru | SRR28045744 | Pre-XDR-TB | lineage3 | None | ERR2307443 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307452 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307618 | MDR-TB | lineage2.2.1 | None | SRR10397157 | HR-TB | lineage2.2.1 | None | ERR11798649 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR28393387 | MDR-TB | lineage2.2.1.1 | None | ERR13284286 | MDR-TB | lineage4.1.2.1 | None | ERR13291073 | MDR-TB | lineage2.1 | None | ERR13291075 | MDR-TB | lineage2.1 | None | ERR4818954 | HR-TB | lineage4.2.1.1 | None | ERR13290321 | MDR-TB | lineage3 | None | ERR3335745 | Pre-XDR-TB | lineage4.5 | pk | ERR4819292 | HR-TB | lineage2.2.1 | gb | ERR5864509 | MDR-TB | lineage2.2.1 | None | SRR1169094 | MDR-TB | lineage2.2.1 | None | ERR234556 | MDR-TB | lineage2.2.1 | ru | ERR7737753 | MDR-TB | lineage7 | None | ERR5865371 | MDR-TB | lineage2.2.1 | None | ERR13284375 | XDR-TB | lineage2.2.1 | None | ERR13284970 | MDR-TB | lineage4.1.2.1 | None | ERR11488459 | MDR-TB | lineage4.3.3 | None | ERR4799909 | Pre-XDR-TB | lineage2.2.1 | in | ERR9119804 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR5987273 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR5866118 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02414870 | MDR-TB | lineage3 | se | ERR5865454 | MDR-TB | lineage2.2.1 | None | SRR5817472 | Pre-XDR-TB | lineage2.2.1 | au | SRR6824574 | Pre-XDR-TB | lineage2.2.1 | cn | ERR5864514 | MDR-TB | lineage2.2.1 | None | ERR4820715 | HR-TB | lineage2.2.1 | gb | ERR11043376 | MDR-TB | lineage4.1.2.1 | None | ERR4810795 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488692 | MDR-TB | lineage4.3.3 | None | ERR5865452 | MDR-TB | lineage2.2.1 | None | ERR11488624 | MDR-TB | lineage4.3.3 | None | ERR4830661 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800332 | Pre-XDR-TB | lineage2.2.1 | in | ERR11488899 | MDR-TB | lineage4.3.3 | None | ERR5864512 | Pre-XDR-TB | lineage2.2.1 | None | SRR6256969 | MDR-TB | lineage2.2.1 | None | SRR1723584 | Pre-XDR-TB | lineage2.2.1 | cn | SRR29231825 | MDR-TB | lineage4.3.4.2 | None | SRR29289399 | Pre-XDR-TB | lineage4.5 | None | SRR28351211 | Pre-XDR-TB | lineage2.2.1 | None | ERR2706986 | MDR-TB | lineage4.3.4.2 | cd | SRR7517790 | MDR-TB | lineage4.1.3 | ci | SRR24673510 | MDR-TB | lineage2.2.1 | None | ERR5863694 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231766 | MDR-TB | lineage4.3.4.2 | None | ERR144573 | MDR-TB | lineage2.2.1 | ru | ERR3148169 | XDR-TB | lineage4.1.2.1 | mx | SRR28351172 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865492 | MDR-TB | lineage2.2.1 | None | ERR13285781 | MDR-TB | lineage2.2.1 | None | ERR11082397 | MDR-TB | lineage4.1.2.1 | None | SRR10380143 | MDR-TB | lineage2.2.1 | None | SRR1723745 | Pre-XDR-TB | lineage2.2.1 | None | ERR9125290 | MDR-TB | lineage3 | None | ERR5864519 | MDR-TB | lineage2.2.1 | None |
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