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SRA data
Rv3855
- c.-117G>A
Drug resistance types
12 Sensitive
0 RR-TB
1 HR-TB
7 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
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lineage
Count
lineage
Count
lineage1.2.2.1
12
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
1
lineage2.2.1
1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
1
La1.7;lineage4.9
1
La1.6;La3;M.canetti;lineage4.2.2
1
lineage4.8
1
La3;M.canetti;lineage2;lineage4.2;lineage4.3
1
M.canetti;lineage4.2
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
24
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11465247
Sensitive
lineage1.2.2.1
None
ERR11465589
Sensitive
lineage1.2.2.1
None
ERR11465681
Sensitive
lineage1.2.2.1
None
ERR11465746
Sensitive
lineage1.2.2.1
None
ERR11466052
Sensitive
lineage1.2.2.1
None
ERR11466426
Sensitive
lineage1.2.2.1
None
ERR11466569
Sensitive
lineage1.2.2.1
None
ERR11466570
Sensitive
lineage1.2.2.1
None
ERR133986
Other
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
None
ERR158583
MDR-TB
La3;M.canetti;lineage2;lineage4.2;lineage4.3
None
Showing 1 to 10 of 24 entries
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