Rv3862c - c.-217_92del
Drug resistance types
203 Sensitive
4 RR-TB
29 HR-TB
11 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.1 | 284 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 284 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819772 | Other | lineage1.1.3.1 | None | SRR29441106 | Sensitive | lineage1.1.3.1 | None | SRR29440828 | Sensitive | lineage1.1.3.1 | None | SRR30182892 | Sensitive | lineage1.1.3.1 | None | SRR6045321 | Other | lineage1.1.3.1 | None | ERR13289940 | Sensitive | lineage1.1.3.1 | None | SRR29772664 | MDR-TB | lineage1.1.3.1 | None | SRR29440934 | Sensitive | lineage1.1.3.1 | None | SRR30182374 | Sensitive | lineage1.1.3.1 | None | ERR752237 | Other | lineage1.1.3.1 | th | ERR718270 | Sensitive | lineage1.1.3.1 | th | ERR718289 | Other | lineage1.1.3.1 | th | ERR718382 | Sensitive | lineage1.1.3.1 | th | ERR752166 | Sensitive | lineage1.1.3.1 | th | ERR751842 | Sensitive | lineage1.1.3.1 | th | ERR752092 | HR-TB | lineage1.1.3.1 | th | SRR6397656 | Sensitive | lineage1.1.3.1 | ca | SRR6397451 | Sensitive | lineage1.1.3.1 | ca | SRR6152941 | Sensitive | lineage1.1.3.1 | ca | SRR2100399 | HR-TB | lineage1.1.3.1 | None | SRR2100479 | Sensitive | lineage1.1.3.1 | None | SRR2100847 | Sensitive | lineage1.1.3.1 | None | SRR2100919 | HR-TB | lineage1.1.3.1 | None | SRR2101821 | Sensitive | lineage1.1.3.1 | None | SRR1735632 | Sensitive | lineage1.1.3.1 | gb | ERR551865 | Sensitive | lineage1.1.3.1 | cg | ERR2517508 | Sensitive | lineage1.1.3.1 | nl | ERR4829793 | Sensitive | lineage1.1.3.1 | it | ERR4815371 | Sensitive | lineage1.1.3.1 | gb | ERR4815505 | Sensitive | lineage1.1.3.1 | gb | ERR4815728 | Sensitive | lineage1.1.3.1 | gb | ERR4815834 | Sensitive | lineage1.1.3.1 | gb | ERR4816436 | Sensitive | lineage1.1.3.1 | gb | ERR4816514 | HR-TB | lineage1.1.3.1 | gb | ERR4818025 | Sensitive | lineage1.1.3.1 | gb | ERR4818189 | Sensitive | lineage1.1.3.1 | gb | ERR4818207 | Sensitive | lineage1.1.3.1 | gb | ERR4819543 | Sensitive | lineage1.1.3.1 | gb | ERR4821381 | Sensitive | lineage1.1.3.1 | gb | ERR4821533 | Sensitive | lineage1.1.3.1 | gb | ERR4821713 | Sensitive | lineage1.1.3.1 | gb | ERR2513124 | Sensitive | lineage1.1.3.1 | gb | ERR2513176 | Sensitive | lineage1.1.3.1 | gb | ERR2513776 | Sensitive | lineage1.1.3.1 | gb | ERR2513796 | Sensitive | lineage1.1.3.1 | gb | ERR2514688 | Sensitive | lineage1.1.3.1 | gb | ERR2515035 | Sensitive | lineage1.1.3.1 | gb | ERR4828876 | Sensitive | lineage1.1.3.1 | None | SRR6045857 | Sensitive | lineage1.1.3.1 | gb | ERR2517128 | Sensitive | lineage1.1.3.1 | nl | SRR29440937 | Sensitive | lineage1.1.3.1 | None | ERR4796637 | Sensitive | lineage1.1.3.1 | in | ERR13258707 | MDR-TB | lineage1.1.3.1 | None | ERR13291508 | Sensitive | lineage1.1.3.1 | None | ERR13291529 | Sensitive | lineage1.1.3.1 | None | ERR13291537 | Sensitive | lineage1.1.3.1 | None | ERR13291639 | Sensitive | lineage1.1.3.1 | None | ERR13291915 | HR-TB | lineage1.1.3.1 | None | ERR13291979 | Other | lineage1.1.3.1 | None | ERR13292046 | Other | lineage1.1.3.1 | None | ERR13292072 | Sensitive | lineage1.1.3.1 | None | ERR9125559 | Sensitive | lineage1.1.3.1 | None | ERR13292440 | Sensitive | lineage1.1.3.1 | None | ERR3132226 | HR-TB | lineage1.1.3.1 | None | ERR3132243 | Other | lineage1.1.3.1 | None | ERR3509861 | HR-TB | lineage1.1.3.1 | None | ERR3806825 | Sensitive | lineage1.1.3.1 | None | ERR3806826 | Sensitive | lineage1.1.3.1 | None | ERR9786027 | Sensitive | lineage1.1.3.1 | None | ERR9786028 | Sensitive | lineage1.1.3.1 | None | ERR9901037 | Sensitive | lineage1.1.3.1 | None | SRR10321151 | Sensitive | lineage1.1.3.1 | None | SRR21711119 | Sensitive | lineage1.1.3.1 | None | SRR21747038 | MDR-TB | lineage1.1.3.1 | None | SRR16370267 | Other | lineage1.1.3.1 | None | SRR16370295 | Sensitive | lineage1.1.3.1 | None | SRR16370666 | Sensitive | lineage1.1.3.1 | None | SRR16370649 | HR-TB | lineage1.1.3.1 | None | SRR29052666 | Sensitive | lineage1.1.3.1 | None | SRR29052715 | Sensitive | lineage1.1.3.1 | None | SRR18911906 | Sensitive | lineage1.1.3.1 | None | SRR21657216 | Sensitive | lineage1.1.3.1 | None | SRR21659037 | Sensitive | lineage1.1.3.1 | None | SRR21676421 | Sensitive | lineage1.1.3.1 | None | SRR21676522 | Sensitive | lineage1.1.3.1 | None | SRR21676927 | HR-TB | lineage1.1.3.1 | None | SRR21686610 | Sensitive | lineage1.1.3.1 | None | SRR21709862 | HR-TB | lineage1.1.3.1 | None | SRR21710669 | Other | lineage1.1.3.1 | None | SRR21710716 | Sensitive | lineage1.1.3.1 | None | SRR29052898 | HR-TB | lineage1.1.3.1 | None | SRR30182885 | Sensitive | lineage1.1.3.1 | None | SRR29053230 | Sensitive | lineage1.1.3.1 | None | SRR29053270 | Other | lineage1.1.3.1 | None | SRR29053257 | Sensitive | lineage1.1.3.1 | None | SRR29053354 | Sensitive | lineage1.1.3.1 | None | SRR29055445 | Sensitive | lineage1.1.3.1 | None | SRR30182668 | Sensitive | lineage1.1.3.1 | None | SRR29055472 | Sensitive | lineage1.1.3.1 | None | SRR29056018 | Other | lineage1.1.3.1 | None | SRR29056188 | RR-TB | lineage1.1.3.1 | None | ERR3275166 | Sensitive | lineage1.1.3.1 | nl | ERR2446523 | RR-TB | lineage1.1.3.1 | nl | SRR29772821 | MDR-TB | lineage1.1.3.1 | None | SRR29440890 | Other | lineage1.1.3.1 | None | ERR4797853 | Sensitive | lineage1.1.3.1 | in | SRR29126260 | Sensitive | lineage1.1.3.1 | None | ERR3276090 | Sensitive | lineage1.1.3.1 | nl | ERR3276220 | Sensitive | lineage1.1.3.1 | nl | SRR29126344 | Other | lineage1.1.3.1 | None | SRR30182443 | Sensitive | lineage1.1.3.1 | None | SRR30182533 | Sensitive | lineage1.1.3.1 | None | ERR13291601 | Sensitive | lineage1.1.3.1 | None | SRR29126518 | Other | lineage1.1.3.1 | None | SRR30182687 | Sensitive | lineage1.1.3.1 | None | ERR4817451 | Sensitive | lineage1.1.3.1 | None | SRR29126648 | Sensitive | lineage1.1.3.1 | None | SRR30182626 | Sensitive | lineage1.1.3.1 | None | SRR29772507 | MDR-TB | lineage1.1.3.1 | None | ERR752083 | Other | lineage1.1.3.1 | th | ERR751703 | Sensitive | lineage1.1.3.1 | th | ERR752005 | Sensitive | lineage1.1.3.1 | th | ERR751667 | HR-TB | lineage1.1.3.1 | th | ERR718327 | HR-TB | lineage1.1.3.1 | th | ERR718527 | Other | lineage1.1.3.1 | th | ERR767968 | HR-TB | lineage1.1.3.1 | th | ERR751991 | Sensitive | lineage1.1.3.1 | th | SRR6397543 | Sensitive | lineage1.1.3.1 | ca | SRR2099957 | HR-TB | lineage1.1.3.1 | None | SRR2100038 | Other | lineage1.1.3.1 | None | SRR2100582 | Sensitive | lineage1.1.3.1 | None | SRR2100648 | Sensitive | lineage1.1.3.1 | None | SRR2100669 | Other | lineage1.1.3.1 | None | SRR2100691 | Sensitive | lineage1.1.3.1 | None | SRR2100690 | Sensitive | lineage1.1.3.1 | None | SRR2101221 | Sensitive | lineage1.1.3.1 | None | SRR2101252 | Sensitive | lineage1.1.3.1 | None | ERR718544 | Other | lineage1.1.3.1 | th | ERR4829026 | Sensitive | lineage1.1.3.1 | it | ERR4814800 | Sensitive | lineage1.1.3.1 | gb | ERR4814819 | HR-TB | lineage1.1.3.1 | gb | ERR4815173 | Other | lineage1.1.3.1 | gb | ERR4817100 | Sensitive | lineage1.1.3.1 | gb | ERR4817210 | Sensitive | lineage1.1.3.1 | gb | ERR4817250 | Sensitive | lineage1.1.3.1 | gb | ERR4818552 | Sensitive | lineage1.1.3.1 | gb | ERR4818558 | Sensitive | lineage1.1.3.1 | gb | ERR4818826 | Sensitive | lineage1.1.3.1 | gb | ERR4818909 | HR-TB | lineage1.1.3.1 | gb | ERR4818927 | Sensitive | lineage1.1.3.1 | gb | ERR4820356 | Sensitive | lineage1.1.3.1 | gb | ERR4822190 | Sensitive | lineage1.1.3.1 | gb | ERR2512806 | Sensitive | lineage1.1.3.1 | gb | ERR2513284 | Sensitive | lineage1.1.3.1 | gb | ERR2513304 | Sensitive | lineage1.1.3.1 | gb | ERR2513339 | Sensitive | lineage1.1.3.1 | gb | ERR2513444 | Other | lineage1.1.3.1 | gb | ERR2514192 | Sensitive | lineage1.1.3.1 | gb | ERR2514993 | Sensitive | lineage1.1.3.1 | gb | ERR8975382 | Sensitive | lineage1.1.3.1 | None | SRR6045338 | Other | lineage1.1.3.1 | gb | SRR6044977 | HR-TB | lineage1.1.3.1 | gb | SRR6046320 | Sensitive | lineage1.1.3.1 | gb | ERR234197 | Sensitive | lineage1.1.3.1 | None | ERR126621 | Sensitive | lineage1.1.3.1 | mw | SRR5818582 | Sensitive | lineage1.1.3.1 | dj | ERR2517287 | Sensitive | lineage1.1.3.1 | nl | ERR4831043 | Sensitive | lineage1.1.3.1 | np | ERR13291395 | Sensitive | lineage1.1.3.1 | None | ERR13291890 | Sensitive | lineage1.1.3.1 | None | ERR13292171 | Sensitive | lineage1.1.3.1 | None | ERR13292249 | Sensitive | lineage1.1.3.1 | None | ERR2660441 | Sensitive | lineage1.1.3.1 | None | ERR9125880 | Sensitive | lineage1.1.3.1 | None | ERR9896141 | Sensitive | lineage1.1.3.1 | None | SRR21711109 | Sensitive | lineage1.1.3.1 | None | SRR21727558 | Sensitive | lineage1.1.3.1 | None | SRR21728165 | Other | lineage1.1.3.1 | None | SRR16089676 | Sensitive | lineage1.1.3.1 | None | SRR18913784 | Sensitive | lineage1.1.3.1 | None | SRR19221474 | Sensitive | lineage1.1.3.1 | None | SRR21659823 | Sensitive | lineage1.1.3.1 | None | SRR21661627 | Sensitive | lineage1.1.3.1 | None | SRR28409710 | Other | lineage1.1.3.1 | None | SRR21662811 | Sensitive | lineage1.1.3.1 | None | SRR21685242 | Sensitive | lineage1.1.3.1 | None | SRR29053065 | HR-TB | lineage1.1.3.1 | None | SRR29053064 | Sensitive | lineage1.1.3.1 | None | SRR29053173 | Sensitive | lineage1.1.3.1 | None | SRR29053193 | Other | lineage1.1.3.1 | None | SRR29053585 | Sensitive | lineage1.1.3.1 | None | SRR29053590 | Sensitive | lineage1.1.3.1 | None | SRR29055760 | Sensitive | lineage1.1.3.1 | None | SRR4423158 | MDR-TB | lineage1.1.3.1 | None | ERR2446323 | Sensitive | lineage1.1.3.1 | nl | ERR3275355 | Sensitive | lineage1.1.3.1 | nl | SRR29126884 | Sensitive | lineage1.1.3.1 | None | ERR4821417 | Other | lineage1.1.3.1 | None | SRR29126218 | Sensitive | lineage1.1.3.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR13291338 | Sensitive | lineage1.1.3.1 | None | SRR11972444 | Sensitive | lineage1.1.3.1 | None | ERR13290858 | Sensitive | lineage1.1.3.1 | None | ERR2512849 | Other | lineage1.1.3.1 | None | SRR29126356 | Sensitive | lineage1.1.3.1 | None | SRR29126868 | Sensitive | lineage1.1.3.1 | None | SRR29772490 | MDR-TB | lineage1.1.3.1 | None | ERR13291234 | HR-TB | lineage1.1.3.1 | None | SRR29126308 | Sensitive | lineage1.1.3.1 | None | SRR29440739 | Sensitive | lineage1.1.3.1 | None | ERR751757 | Sensitive | lineage1.1.3.1 | th | ERR718388 | Sensitive | lineage1.1.3.1 | th | ERR718329 | Other | lineage1.1.3.1 | th | ERR752072 | Other | lineage1.1.3.1 | th | SRR2100134 | Sensitive | lineage1.1.3.1 | None | SRR2100170 | HR-TB | lineage1.1.3.1 | None | SRR2100177 | HR-TB | lineage1.1.3.1 | None | SRR2100189 | HR-TB | lineage1.1.3.1 | None | SRR2100209 | HR-TB | lineage1.1.3.1 | None | SRR2100242 | Sensitive | lineage1.1.3.1 | None | SRR2100982 | Sensitive | lineage1.1.3.1 | None | SRR2101002 | Sensitive | lineage1.1.3.1 | None | SRR2101094 | Sensitive | lineage1.1.3.1 | None | SRR2101104 | Sensitive | lineage1.1.3.1 | None | ERR551866 | Sensitive | lineage1.1.3.1 | None | ERR2516763 | MDR-TB | lineage1.1.3.1 | gb | ERR2516881 | MDR-TB | lineage1.1.3.1 | gb | ERR2516833 | MDR-TB | lineage1.1.3.1 | gb | ERR4829534 | Other | lineage1.1.3.1 | it | ERR4814294 | Sensitive | lineage1.1.3.1 | gb | ERR4814533 | Sensitive | lineage1.1.3.1 | gb | ERR4814558 | Sensitive | lineage1.1.3.1 | gb | ERR4817689 | Sensitive | lineage1.1.3.1 | gb | ERR4817777 | Sensitive | lineage1.1.3.1 | gb | ERR4817824 | Other | lineage1.1.3.1 | gb | ERR4819414 | Sensitive | lineage1.1.3.1 | gb | ERR4819502 | Sensitive | lineage1.1.3.1 | gb | ERR2512847 | Sensitive | lineage1.1.3.1 | gb | ERR2513061 | Sensitive | lineage1.1.3.1 | gb | ERR2512959 | Other | lineage1.1.3.1 | gb | ERR2513669 | Sensitive | lineage1.1.3.1 | gb | ERR2513736 | Sensitive | lineage1.1.3.1 | gb | ERR2514405 | Sensitive | lineage1.1.3.1 | gb | ERR2512631 | Sensitive | lineage1.1.3.1 | gb | ERR2512692 | Sensitive | lineage1.1.3.1 | gb | ERR2512698 | Sensitive | lineage1.1.3.1 | gb | ERR2512731 | Sensitive | lineage1.1.3.1 | gb | SRR29772718 | MDR-TB | lineage1.1.3.1 | None | ERR190377 | Sensitive | lineage1.1.3.1 | mw | SRR5818649 | Sensitive | lineage1.1.3.1 | dj | ERR13292365 | Sensitive | lineage1.1.3.1 | None | SRR11972210 | Sensitive | lineage1.1.3.1 | None | SRR21714179 | Sensitive | lineage1.1.3.1 | None | SRR21727763 | Sensitive | lineage1.1.3.1 | None | SRR21736374 | Sensitive | lineage1.1.3.1 | None | SRR16058166 | Sensitive | lineage1.1.3.1 | None | SRR16058451 | Sensitive | lineage1.1.3.1 | None | SRR16089904 | Sensitive | lineage1.1.3.1 | None | SRR16096987 | Sensitive | lineage1.1.3.1 | None | SRR16370569 | HR-TB | lineage1.1.3.1 | None | SRR16370604 | HR-TB | lineage1.1.3.1 | None | SRR18909921 | Sensitive | lineage1.1.3.1 | None | SRR18911137 | Sensitive | lineage1.1.3.1 | None | SRR19267898 | Sensitive | lineage1.1.3.1 | None | SRR19267900 | HR-TB | lineage1.1.3.1 | None | SRR29052688 | HR-TB | lineage1.1.3.1 | None | SRR21675604 | Other | lineage1.1.3.1 | None | SRR21675713 | Other | lineage1.1.3.1 | None | SRR21675848 | Other | lineage1.1.3.1 | None | SRR21686100 | Sensitive | lineage1.1.3.1 | None | SRR21685365 | Sensitive | lineage1.1.3.1 | None | SRR29053045 | Sensitive | lineage1.1.3.1 | None | SRR29053394 | Sensitive | lineage1.1.3.1 | None | SRR29053418 | Other | lineage1.1.3.1 | None | SRR29126734 | Sensitive | lineage1.1.3.1 | None | SRR29053515 | Sensitive | lineage1.1.3.1 | None | SRR29056247 | HR-TB | lineage1.1.3.1 | None | SRR4423176 | Pre-XDR-TB | lineage1.1.3.1 | None | ERR2446410 | Sensitive | lineage1.1.3.1 | nl | ERR2446216 | Sensitive | lineage1.1.3.1 | nl | ERR3275623 | Sensitive | lineage1.1.3.1 | nl | ERR3275160 | Sensitive | lineage1.1.3.1 | nl | ERR3275694 | RR-TB | lineage1.1.3.1 | nl | SRR29440952 | Sensitive | lineage1.1.3.1 | None |
|---|
