Rv3862c - c.-73T>G


Drug resistance types
88 Sensitive 8 RR-TB 26 HR-TB 177 MDR-TB 67 Pre-XDR-TB 0 XDR-TB 12 Other
lineage Counts
lineage Count
lineage4.3.3 25
lineage4.2.1.1 7
lineage2.2.1 50
lineage4.3.3;lineage4.1.2.1 1
lineage4.1.2.1 12
lineage2.2 1
lineage4.8 17
lineage2.2.2 11
lineage4.2.1 107
lineage2.2.1.1 6
lineage4.9 4
lineage4.3 2
lineage1.2.1 15
lineage3.1.1 48
lineage4.3.4.2 5
lineage4.1.1.3 9
lineage4.8;lineage4.2.1 1
lineage4.2.1;lineage2.2.1 2
lineage4.4.2 4
lineage2.2.1.2 1
lineage4.5 3
lineage4.4.1.1 1
lineage3.1.2.1 2
lineage4.1.2 1
lineage4.3.2 3
lineage4.3.1 1
lineage4.7 1
lineage4.3.4 1
lineage4.5;lineage2.2.1.1 1
lineage2.1 1
lineage4.8;lineage4.1.2.1 1
lineage3 11
lineage4.3.4.1 1
lineage4 2
lineage4.2.2.2 3
lineage4.6.1.1 2
lineage4.3.3;lineage2.2.1 1
lineage4.2.1.1;lineage2.2.1 1
lineage4.9;lineage2.2.2 1
lineage4.8;lineage4.3.4.2 1
lineage4.2.2.1 1
lineage4.6.1.2 3
lineage3.1 3
1
lineage4.2.2.2;lineage3 1
lineage4.2.1;lineage2.2 1
lineage4.6 1
spoligotype Counts
spoligotype Count
None 378
Geographic prevalence
Country level data for this variant is available for 64 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11050016 Sensitive lineage4.3.3 None
ERR11050020 MDR-TB lineage4.2.1.1 None
SRR10305846 Other lineage2.2.1 None
ERR9027230 MDR-TB lineage4.3.3;lineage4.1.2.1 None
ERR970452 RR-TB lineage4.1.2.1 None
ERR972799 RR-TB lineage4.1.2.1 None
SRR1013658 Pre-XDR-TB lineage2.2 None
SRR26112234 Sensitive lineage4.3.3 None
ERR9121749 HR-TB lineage4.8 None
ERR9125550 HR-TB lineage4.3.3 None
SRR1013659 Pre-XDR-TB lineage2.2.2 None
SRR10379896 MDR-TB lineage4.2.1 None
SRR10379956 Pre-XDR-TB lineage4.2.1 None
SRR10379913 MDR-TB lineage4.2.1 None
SRR10379912 Pre-XDR-TB lineage4.2.1 None
SRR10379932 MDR-TB lineage4.2.1 None
SRR10379957 MDR-TB lineage4.2.1 None
SRR10379949 MDR-TB lineage4.2.1 None
SRR10380013 Pre-XDR-TB lineage4.2.1 None
SRR10379948 MDR-TB lineage4.2.1 None
SRR10380022 Pre-XDR-TB lineage4.2.1 None
SRR10379963 MDR-TB lineage4.2.1 None
SRR10380017 Pre-XDR-TB lineage4.2.1 None
SRR10380014 MDR-TB lineage4.2.1 None
SRR10380015 Pre-XDR-TB lineage4.2.1 None
SRR10380047 MDR-TB lineage4.2.1 None
SRR10380037 Pre-XDR-TB lineage4.2.1 None
SRR10380138 MDR-TB lineage4.2.1 None
SRR10380053 MDR-TB lineage4.2.1 None
SRR10380085 MDR-TB lineage4.2.1 None
SRR10380079 MDR-TB lineage4.2.1 None
SRR10380097 MDR-TB lineage4.2.1 None
SRR1049054 Pre-XDR-TB lineage2.2.2 None
SRR10380197 MDR-TB lineage4.3.3 None
SRR10380213 MDR-TB lineage4.2.1 None
SRR10380253 MDR-TB lineage4.2.1 None
SRR1049055 Pre-XDR-TB lineage2.2.2 None
SRR1166096 MDR-TB lineage4.2.1 None
SRR10809098 Sensitive lineage2.2.1 None
SRR1166090 MDR-TB lineage4.2.1 None
SRR10808793 Sensitive lineage2.2.2 None
SRR1169171 MDR-TB lineage4.2.1 None
SRR1169153 MDR-TB lineage4.2.1 None
SRR11972220 HR-TB lineage2.2.1.1 None
SRR12830362 Sensitive lineage4.3.3 None
SRR11972345 MDR-TB lineage2.2.1.1 None
SRR13180284 Sensitive lineage4.9 None
SRR12830428 Sensitive lineage4.3.3 None
SRR12931675 Sensitive lineage4.3 None
SRR12882048 Sensitive lineage1.2.1 None
SRR12882484 MDR-TB lineage3.1.1 None
SRR13583301 HR-TB lineage4.3.4.2 None
SRR14164530 Sensitive lineage4.3.3 None
SRR13583371 MDR-TB lineage4.3.4.2 None
SRR14519744 Sensitive lineage1.2.1 None
SRR14164558 Other lineage4.1.2.1 None
SRR14164703 Sensitive lineage4.3.4.2 None
SRR14519739 Sensitive lineage1.2.1 None
SRR14164520 Sensitive lineage4.3.3 None
SRR14519853 Sensitive lineage1.2.1 None
SRR14519826 Sensitive lineage1.2.1 None
SRR14519827 Sensitive lineage1.2.1 None
SRR14519845 Sensitive lineage1.2.1 None
SRR14519752 Sensitive lineage1.2.1 None
SRR14782216 MDR-TB lineage4.2.1 None
SRR14520010 Sensitive lineage1.2.1 None
SRR14636667 Sensitive lineage1.2.1 None
SRR14781955 Pre-XDR-TB lineage2.2.1 None
SRR14782184 MDR-TB lineage4.2.1 None
SRR14519995 Sensitive lineage4.1.1.3 None
SRR14782115 HR-TB lineage4.2.1 None
SRR14782680 Pre-XDR-TB lineage4.2.1 None
SRR14782458 Pre-XDR-TB lineage4.2.1 None
SRR14782338 Pre-XDR-TB lineage4.2.1 None
SRR14782620 Pre-XDR-TB lineage4.2.1 None
SRR14782673 MDR-TB lineage4.3.3 None
SRR14782723 MDR-TB lineage4.8;lineage4.2.1 None
SRR14782768 MDR-TB lineage4.2.1 None
SRR16370310 Sensitive lineage4.3.3 None
SRR14801385 MDR-TB lineage4.2.1 None
SRR14801504 MDR-TB lineage4.2.1;lineage2.2.1 None
SRR14801605 MDR-TB lineage4.2.1 None
SRR14802008 MDR-TB lineage4.2.1 None
SRR14802187 HR-TB lineage4.2.1 None
SRR14807523 HR-TB lineage4.2.1 None
SRR14807652 Pre-XDR-TB lineage2.2.1 None
SRR15014714 MDR-TB lineage4.8 None
SRR15316108 MDR-TB lineage4.4.2 None
SRR15506904 MDR-TB lineage2.2.1.2 None
SRR15600382 MDR-TB lineage2.2.1.1 None
SRR15723265 Sensitive lineage4.5 None
SRR16058555 HR-TB lineage4.3.3 None
SRR14801380 MDR-TB lineage4.2.1 None
SRR14801392 MDR-TB lineage4.2.1 None
SRR14801891 MDR-TB lineage4.2.1 None
SRR14801896 HR-TB lineage4.2.1 None
SRR14807521 MDR-TB lineage4.2.1 None
SRR15368839 Pre-XDR-TB lineage2.2.1.1 None
SRR16089686 Sensitive lineage4.8 None
SRR16115084 Sensitive lineage2.2.2 None
SRR16370385 HR-TB lineage2.2.1 None
SRR18715027 Sensitive lineage4.3.3 None
SRR18715423 Pre-XDR-TB lineage2.2.1 None
SRR18911882 Sensitive lineage2.2.2 None
SRR21240068 HR-TB lineage4.4.1.1 None
SRR18912993 Sensitive lineage4.9 None
SRR26112691 Sensitive lineage4.3.3 None
SRR24827271 Sensitive lineage2.2.1 None
SRR25207375 MDR-TB lineage4.4.2 None
SRR19303958 Sensitive lineage3.1.2.1 None
SRR20969358 MDR-TB lineage2.2.1 None
SRR20969424 HR-TB lineage2.2.1 None
SRR21277168 RR-TB lineage2.2.1 None
SRR21277056 Sensitive lineage2.2.1 None
SRR21277852 Pre-XDR-TB lineage2.2.1.1 None
SRR21277839 MDR-TB lineage4.4.2 None
SRR21277162 Sensitive lineage2.2.1 None
SRR21576633 MDR-TB lineage2.2.1 None
SRR21595944 Other lineage2.2.1 None
SRR22528560 Sensitive lineage4.1.2 None
SRR21663271 Sensitive lineage4.3.2 None
SRR21685234 Sensitive lineage4.8 None
SRR21722059 Sensitive lineage4.3.3 None
SRR21595935 Other lineage2.2.1 None
SRR21657457 Sensitive lineage4.3.3 None
SRR21686093 Sensitive lineage4.3.3 None
SRR21714044 HR-TB lineage4.5 None
ERR11068346 Sensitive lineage4.8 None
ERR11068102 Sensitive lineage4.8 None
ERR11068187 MDR-TB lineage4.2.1 None
ERR11068985 Sensitive lineage4.1.2.1 None
ERR11068946 Sensitive lineage4.8 None
ERR11068894 MDR-TB lineage2.2.1 None
SRR25389546 HR-TB lineage2.2.1 None
ERR11081125 MDR-TB lineage4.2.1 None
ERR11081882 Sensitive lineage4.1.2.1 None
SRR21732663 Sensitive lineage2.2.1 None
SRR24710055 MDR-TB lineage2.2.1 None
SRR27450333 Sensitive lineage4.3.1 None
SRR26399744 HR-TB lineage2.2.1 None
SRR10828634 RR-TB lineage2.2.1 None
SRR24083610 Sensitive lineage2.2.1 None
SRR21732605 Sensitive lineage1.2.1 None
ERR12544126 Sensitive lineage1.2.1 None
SRR26399465 Other lineage2.2.1 None
SRR28239953 Sensitive lineage4.1.2.1 None
SRR25389547 HR-TB lineage2.2.1 None
SRR25515039 Sensitive lineage2.2.1 None
SRR26112726 Sensitive lineage2.2.1.1 None
SRR27449976 Sensitive lineage1.2.1 None
SRR27450224 Sensitive lineage4.9 None
SRR671770 Pre-XDR-TB lineage2.2.1 cn
ERR4815318 Other lineage4.1.2.1 None
ERR1034660 MDR-TB lineage4.8 bg
ERR1034657 MDR-TB lineage4.7 bg
SRR671748 MDR-TB lineage2.2.1 cn
SRR3085251 Pre-XDR-TB lineage4.2.1 None
ERR4814107 Sensitive lineage4.3.4 None
ERR1034681 MDR-TB lineage4.1.2.1 co
SRR6824656 MDR-TB lineage2.2.1 cn
SRR6824436 Sensitive lineage4.5;lineage2.2.1.1 cn
SRR6824481 Pre-XDR-TB lineage2.2.1 cn
ERR4813219 Pre-XDR-TB lineage4.1.1.3 None
SRR8380948 MDR-TB lineage4.8 in
SRR3743386 Pre-XDR-TB lineage4.2.1 None
SRR1723519 RR-TB lineage2.2.1 cn
SRR3743396 Pre-XDR-TB lineage4.2.1 None
SRR3743391 Pre-XDR-TB lineage4.2.1 None
SRR5074068 Other lineage2.1 vn
ERR4816755 Other lineage4.1.1.3 None
ERR779896 MDR-TB lineage4.1.1.3 pe
ERR234673 Sensitive lineage4.8;lineage4.1.2.1 None
SRR5073669 Sensitive lineage2.2.1 vn
ERR718507 HR-TB lineage2.2.1 th
ERR11067162 Pre-XDR-TB lineage4.2.1 None
SAMEA2534798 MDR-TB lineage2.2.1 uz
SRR5153257 MDR-TB lineage4.2.1.1 None
SAMEA2534690 MDR-TB lineage4.3.3 uz
ERR7911065 MDR-TB lineage4.2.1 md
SRR5153835 Pre-XDR-TB lineage4.2.1 None
SRR2100740 Pre-XDR-TB lineage2.2.1 None
SRR5153817 MDR-TB lineage4.2.1 None
SRR5153823 MDR-TB lineage4.2.1 None
SRR5153857 MDR-TB lineage4.2.1 None
ERR7910898 MDR-TB lineage4.2.1 md
ERR7911229 MDR-TB lineage4.2.1 md
ERR1193903 MDR-TB lineage4.3.3 uz
ERR7911236 MDR-TB lineage4.2.1 md
ERR7911232 MDR-TB lineage4.2.1 md
ERR7910952 MDR-TB lineage4.2.1 md
ERR7911259 MDR-TB lineage4.2.1 md
SAMN02584630 MDR-TB lineage4.2.1 md
ERR7911272 MDR-TB lineage4.2.1 md
SRR6398085 Sensitive lineage3 ca
SAMN02360608 Pre-XDR-TB lineage2.2.2 kr
ERR7911642 Pre-XDR-TB lineage2.2.2 za
SRR6398083 Sensitive lineage3 ca
ERR133981 MDR-TB lineage4.2.1.1 ru
ERR2706933 MDR-TB lineage4.3.4.1 cd
ERR1023304 Sensitive lineage4.8 None
SAMN02584658 MDR-TB lineage4.2.1 md
ERR4820142 Sensitive lineage4 None
ERR233371 Sensitive lineage4.8 us
SRR5535909 MDR-TB lineage3.1.1 None
SRR5535907 MDR-TB lineage3.1.1 None
SRR5535892 MDR-TB lineage3.1.1 None
SRR5535908 MDR-TB lineage3.1.1 None
SRR5535914 MDR-TB lineage3.1.1 None
SRR5535911 MDR-TB lineage3.1.1 None
SRR5535912 MDR-TB lineage3.1.1 None
SRR5535910 MDR-TB lineage3.1.1 None
SRR5535916 MDR-TB lineage3.1.1 None
SRR5535915 MDR-TB lineage3.1.1 None
SRR5535913 MDR-TB lineage3.1.1 None
SRR5535922 MDR-TB lineage3.1.1 None
SRR5535918 MDR-TB lineage3.1.1 None
SRR5535917 MDR-TB lineage3.1.1 None
SRR5535920 MDR-TB lineage3.1.1 None
ERR4821163 Other lineage4.1.2.1 None
ERR266521 Pre-XDR-TB lineage2.2.1 None
SRR5535931 MDR-TB lineage3.1.1 None
ERR4798059 Sensitive lineage3.1.2.1 in
ERR3148192 MDR-TB lineage4.3.3 mx
ERR2516984 Pre-XDR-TB lineage2.2.1 gb
ERR4822343 Pre-XDR-TB lineage2.2.2 None
ERR2517100 Pre-XDR-TB lineage4.2.2.2 gb
ERR4828091 Pre-XDR-TB lineage2.2.1 None
ERR4822396 HR-TB lineage2.2.1 kg
ERR4798364 Pre-XDR-TB lineage3 in
ERR3335764 Pre-XDR-TB lineage3 pk
ERR4828130 Pre-XDR-TB lineage2.2.1 None
ERR2245380 Sensitive lineage3.1.1 no
SRR8651560 MDR-TB lineage2.2.1 cn
ERR4810944 MDR-TB lineage4.4.2 cn
SRR6458452 HR-TB lineage2.2.1 None
ERR4810484 MDR-TB lineage2.2.1 cn
SRR8651598 Pre-XDR-TB lineage2.2.1 cn
SRR6484844 Sensitive lineage4.3.3 None
ERR4811650 Pre-XDR-TB lineage4.5 cn
ERR4797443 Sensitive lineage3 in
ERR4829724 MDR-TB lineage4.2.1 it
ERR4800003 Sensitive lineage3 in
ERR2510847 Pre-XDR-TB lineage4.2.1 it
ERR4800438 Sensitive lineage4.8 in
ERR4829804 Sensitive lineage3 it
ERR4872283 Pre-XDR-TB lineage4.2.1 None
ERR4872300 Pre-XDR-TB lineage4.2.1 None
ERR4872289 MDR-TB lineage4.2.1 None
ERR4812983 MDR-TB lineage4.3.2 pe
ERR4872302 MDR-TB lineage4.2.1 None
SRR6807735 MDR-TB lineage4.2.1 None
SRR6964621 MDR-TB lineage3 None
SRR6807691 MDR-TB lineage4.2.1 None
SRR6807692 MDR-TB lineage4.2.1 None
DRR473685 Sensitive lineage4.8 None
SRR6807736 MDR-TB lineage4.2.1 None
ERR4813226 Sensitive lineage4.1.2.1 pe
ERR4812516 MDR-TB lineage4.3.3 pe
ERR3287495 Pre-XDR-TB lineage4.1.1.3 pe
SRR7645920 Pre-XDR-TB lineage4.2.1 None
ERR3287331 Pre-XDR-TB lineage4.1.1.3 pe
SRR7516442 Pre-XDR-TB lineage2.2.1 None
SRR7592342 Pre-XDR-TB lineage4 None
ERR4830760 MDR-TB lineage3 ir
ERR2510587 Pre-XDR-TB lineage3 pk
ERR4816072 Sensitive lineage4.6.1.1 gb
SRR7535052 Sensitive lineage4.6.1.1 None
SRR7645817 MDR-TB lineage4.2.1 None
SRR7645838 MDR-TB lineage4.2.1 None
SRR7645943 MDR-TB lineage4.2.1 None
SRR7755723 MDR-TB lineage4.2.1;lineage2.2.1 None
SRR7646032 Pre-XDR-TB lineage4.2.1 None
SRR7646058 MDR-TB lineage4.2.1 None
SRR7653080 Pre-XDR-TB lineage4.3.3;lineage2.2.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR7646073 MDR-TB lineage4.2.1 None
SRR7755696 MDR-TB lineage4.2.1.1;lineage2.2.1 None
DRR188633 Sensitive lineage4.9 None
SRR7755735 MDR-TB lineage4.2.1 None
SRR7755749 Other lineage4.2.1.1 None
DRR130065 Pre-XDR-TB lineage4.9;lineage2.2.2 None
ERR031489 Sensitive lineage4.8;lineage4.3.4.2 None
DRR188951 Sensitive lineage2.2.1 None
ERR11798661 MDR-TB lineage4.2.1.1 None
ERR11798665 MDR-TB lineage4.2.1 None
ERR11798668 Pre-XDR-TB lineage4.2.1 None
ERR11798671 MDR-TB lineage4.2.1 None
ERR10762336 MDR-TB lineage4.2.1 None
ERR10680110 RR-TB lineage4.1.1.3 None
ERR10762260 MDR-TB lineage4.2.1 None
ERR11043528 MDR-TB lineage4.8 None
ERR10762339 MDR-TB lineage4.2.1 None
ERR10762386 MDR-TB lineage4.2.1 None
ERR10762377 MDR-TB lineage4.2.1 None
ERR10762396 MDR-TB lineage4.2.1 None
ERR10762434 MDR-TB lineage4.3.3 None
ERR10762444 MDR-TB lineage4.2.1 None
ERR10762447 Pre-XDR-TB lineage4.2.1 None
ERR10762461 MDR-TB lineage4.2.1 None
ERR10762365 Pre-XDR-TB lineage4.2.1 None
ERR10762442 Pre-XDR-TB lineage4.2.1 None
ERR11798666 MDR-TB lineage4.2.1 None
ERR11044840 Sensitive lineage3 None
ERR11798611 Pre-XDR-TB lineage2.2.1 None
ERR11044631 Sensitive lineage4.2.2.1 None
ERR11044849 Pre-XDR-TB lineage4.2.1 None
ERR4820677 Other lineage4.1.2.1 gb
ERR11798667 MDR-TB lineage4.2.1 None
ERR1367657 HR-TB lineage4.6.1.2 None
ERR4195285 MDR-TB lineage4.1.2.1 None
ERR11049436 Sensitive lineage4.8 None
ERR4178232 Sensitive lineage4.3.4.2 None
ERR1367677 HR-TB lineage4.6.1.2 None
ERR12118032 Pre-XDR-TB lineage4.1.1.3 None
ERR403327 Pre-XDR-TB lineage2.2.1 None
ERR4423657 MDR-TB lineage3.1.1 None
ERR4195620 HR-TB lineage4.8 None
ERR4423533 MDR-TB lineage3.1.1 None
ERR4423661 MDR-TB lineage3.1.1 None
ERR4423656 MDR-TB lineage3.1.1 None
ERR4423654 MDR-TB lineage3.1.1 None
ERR4423660 MDR-TB lineage3.1.1 None
ERR4423662 MDR-TB lineage3.1.1 None
ERR4423672 MDR-TB lineage3.1.1 None
ERR4423663 MDR-TB lineage3.1.1 None
ERR4423664 HR-TB lineage3.1.1 None
ERR4423655 MDR-TB lineage3.1 None
ERR4423688 MDR-TB lineage3.1.1 None
ERR4423673 MDR-TB lineage3.1.1 None
ERR4423684 MDR-TB lineage3.1.1 None
ERR4423671 HR-TB None
ERR4423686 MDR-TB lineage3.1.1 None
ERR4423694 MDR-TB lineage3.1.1 None
ERR4423685 MDR-TB lineage3.1.1 None
ERR4423700 MDR-TB lineage3.1.1 None
ERR4423687 MDR-TB lineage3.1.1 None
ERR4423698 MDR-TB lineage3.1.1 None
ERR4423695 MDR-TB lineage3.1.1 None
ERR4423696 MDR-TB lineage3.1.1 None
ERR4423689 MDR-TB lineage3.1.1 None
ERR4423702 MDR-TB lineage3.1.1 None
ERR4423705 RR-TB lineage3.1 None
ERR4423701 MDR-TB lineage3.1.1 None
ERR4423699 MDR-TB lineage3.1.1 None
ERR4423703 MDR-TB lineage3.1.1 None
ERR4423704 RR-TB lineage3.1 None
ERR4423761 MDR-TB lineage3.1.1 None
ERR4423762 MDR-TB lineage3.1.1 None
ERR4423768 MDR-TB lineage3.1.1 None
ERR4423767 MDR-TB lineage3.1.1 None
ERR11798662 MDR-TB lineage4.2.1 None
ERR4553539 MDR-TB lineage2.2.1 None
ERR4553408 MDR-TB lineage4.3.2 None
ERR4596929 MDR-TB lineage4.2.2.2;lineage3 None
ERR5866014 MDR-TB lineage4.2.1.1 None
ERR11798663 MDR-TB lineage4.2.1 None
ERR11798669 Pre-XDR-TB lineage4.2.1;lineage2.2 None
ERR11798670 MDR-TB lineage4.2.1 None
ERR4828878 MDR-TB lineage4.3.3 None
ERR4808902 Pre-XDR-TB lineage2.2.2 za
ERR11798664 MDR-TB lineage4.2.1 None
ERR4828631 HR-TB lineage2.2.1 vn
ERR4800165 Pre-XDR-TB lineage4.3.3 None
ERR4800584 Other lineage4.6 None
ERR12268438 HR-TB lineage4.3 None
ERR8976088 Pre-XDR-TB lineage2.2.2 None
ERR4812297 Pre-XDR-TB lineage4.1.1.3 None
ERR5866015 MDR-TB lineage4.2.1.1 None
ERR6358925 MDR-TB lineage4.6.1.2 None
ERR6866320 Sensitive lineage4.8 None
ERR6865510 Sensitive lineage4.3.4.2 None
SRR21733055 Sensitive lineage1.2.1 None
SRR21732406 Sensitive lineage1.2.1 None
ERR7910914 MDR-TB lineage4.2.1 None
ERR7737745 MDR-TB lineage4.2.2.2 None
ERR7737882 MDR-TB lineage4.2.2.2 None
SRR21733298 Sensitive lineage2.2.1 None
SRR20958113 Sensitive lineage4.3.3 None