Rv3862c - c.-77G>C
Drug resistance types
106 Sensitive
3 RR-TB
13 HR-TB
9 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 86 |
| lineage4.3.2.1 | 6 |
| lineage2.2.1 | 9 |
| lineage6.3.3 | 5 |
| lineage6.1.1 | 17 |
| lineage3.1.2 | 4 |
| lineage1.1.2 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.6.4 | 1 |
| lineage5 | 2 |
| lineage4.4.2 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage4.3.3 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.1.2.1;lineage6.1.1 | 1 |
| lineage4.2.1;lineage4.8 | 1 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 144 |
Geographic prevalence
Country level data for this variant is available for 35 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6484869 | HR-TB | lineage4.8 | None | ERR4819248 | Sensitive | lineage4.8 | None | ERR351886 | Sensitive | lineage4.3.2.1 | None | ERR2432986 | Pre-XDR-TB | lineage4.8 | None | ERR2512537 | Sensitive | lineage4.8 | gb | ERR11068027 | Sensitive | lineage4.8 | None | ERR4820433 | Sensitive | lineage4.8 | gb | SRR1723795 | MDR-TB | lineage2.2.1 | cn | SRR998576 | Sensitive | lineage6.3.3 | None | ERR403344 | Sensitive | lineage6.1.1 | None | SRR17406775 | Sensitive | lineage3.1.2 | None | ERR11043326 | HR-TB | lineage4.8 | None | ERR2446379 | Sensitive | lineage4.8 | nl | SRR10306016 | MDR-TB | lineage2.2.1 | None | ERR9787048 | Sensitive | lineage6.1.1 | None | SAMN02599098 | Sensitive | lineage4.8 | in | SRR23862116 | Sensitive | lineage4.8 | None | SRR18714852 | Sensitive | lineage4.8 | None | ERR3803977 | Sensitive | lineage6.1.1 | None | ERR4816924 | Sensitive | lineage4.8 | gb | SRR3082143 | Sensitive | lineage4.8 | None | ERR4800200 | Sensitive | lineage1.1.2 | in | SRR998579 | Sensitive | lineage6.3.3 | None | ERR229967 | HR-TB | lineage4.8 | ru | ERR11775795 | Sensitive | lineage4.3.4.2.1 | None | SRR28046231 | Sensitive | lineage3.1.2 | None | ERR4830064 | Sensitive | lineage4.8 | None | ERR11068064 | Sensitive | lineage4.8 | None | SRR7755657 | Other | lineage4.8 | None | SRR21277749 | Sensitive | lineage2.2.1 | None | ERR1213943 | RR-TB | lineage4.8 | kz | SRR21689436 | Sensitive | lineage4.8 | None | ERR4829088 | Sensitive | lineage4.8 | it | SRR23861919 | Sensitive | lineage4.8 | None | ERR234694 | Sensitive | lineage4.8 | ru | SRR21733266 | HR-TB | lineage1.1.1 | None | SRR7755672 | Sensitive | lineage4.8 | None | SRR2101230 | Sensitive | lineage4.3.2.1 | None | SRR1175160 | Sensitive | lineage4.8 | None | ERR4192391 | Sensitive | lineage6.1.1 | None | ERR3275287 | Sensitive | lineage4.8 | nl | ERR2600438 | Sensitive | lineage4.8 | None | SRR21276933 | Pre-XDR-TB | lineage2.2.1 | None | ERR351892 | Sensitive | lineage4.3.2.1 | None | SRR7755687 | Sensitive | lineage4.8 | None | ERR4817564 | Sensitive | lineage4.8 | gb | ERR4795892 | Sensitive | lineage4.8 | None | SRR16088262 | Sensitive | lineage4.8 | None | ERR2516607 | MDR-TB | lineage4.1.2.1 | nl | SRR14801637 | HR-TB | lineage4.2.1 | None | ERR1465856 | Sensitive | lineage4.8 | None | ERR386818 | Sensitive | lineage4.3.2.1 | None | ERR229963 | HR-TB | lineage4.8 | ru | SRR23862083 | Sensitive | lineage4.8 | None | ERR2514113 | Sensitive | lineage4.8 | gb | SRR998578 | Sensitive | lineage6.3.3 | None | ERR2510599 | MDR-TB | lineage4.8 | None | DRR184884 | MDR-TB | lineage2.2.1 | vn | ERR4192413 | Sensitive | lineage6.1.1 | None | SRR7131112 | Sensitive | lineage4.8 | None | ERR439966 | Sensitive | lineage4.6.4 | None | ERR4829775 | Sensitive | lineage4.8 | None | ERR11082029 | Sensitive | lineage4.8 | None | SRR7070192 | Sensitive | lineage6.1.1 | None | SRR6831713 | RR-TB | lineage4.8 | None | ERR386824 | Sensitive | lineage4.3.2.1 | None | SAMN02628503 | Pre-XDR-TB | lineage4.8 | ir | ERR11081698 | Sensitive | lineage4.8 | None | SRR1181111 | Sensitive | lineage4.8 | None | ERR4192392 | Other | lineage6.1.1 | None | SRR17333992 | Sensitive | lineage1.1.2 | None | ERR4814014 | Sensitive | lineage4.8 | br | ERR4818436 | Other | lineage4.8 | None | SRR7645851 | Sensitive | lineage4.8 | None | ERR4820446 | Sensitive | lineage4.8 | None | SRR7645932 | Sensitive | lineage4.8 | None | SRR28239691 | HR-TB | lineage4.8 | None | ERR11775752 | Sensitive | lineage4.8 | None | ERR2510636 | MDR-TB | lineage4.8 | pk | ERR2513326 | Sensitive | lineage6.1.1 | gb | ERR2516651 | MDR-TB | lineage5 | nl | ERR2200127 | Sensitive | lineage4.8 | de | ERR3132161 | RR-TB | lineage4.8 | None | SRR15465763 | Pre-XDR-TB | lineage2.2.1 | None | SRR26400066 | HR-TB | lineage4.4.2 | None | SRR2101224 | Sensitive | lineage4.3.2.1 | None | ERR4814048 | Sensitive | lineage4.8 | br | SRR28240019 | HR-TB | lineage4.8 | None | ERR7363105 | Sensitive | lineage4.8 | None | SAMN02419575 | Sensitive | lineage4.8 | by | SRR21277131 | Sensitive | lineage2.2.1 | None | ERR2510754 | Sensitive | lineage4.8 | it | ERR4821170 | Sensitive | lineage4.8 | None | SRR998577 | Sensitive | lineage6.3.3 | None | SRR23861945 | Sensitive | lineage4.8 | None | ERR4192412 | Sensitive | lineage6.1.1 | None | ERR4820241 | Sensitive | lineage4.8 | None | ERR4818388 | Sensitive | lineage4.8 | None | ERR4192550 | Sensitive | lineage6.1.1 | None | SRR3085283 | Sensitive | lineage4.8 | None | SRR1173859 | Pre-XDR-TB | lineage4.8 | None | SRR1181047 | Sensitive | lineage4.8 | None | ERR2653002 | Sensitive | lineage4.8 | None | SRR24256301 | Other | lineage2.2.1;lineage4.8 | None | SRR1173580 | Pre-XDR-TB | lineage4.8 | None | SRR3675244 | Sensitive | lineage4.8 | gb | ERR4192356 | Sensitive | lineage6.1.1 | None | ERR108463 | Sensitive | lineage4.8 | ru | ERR11067569 | Sensitive | lineage4.8 | None | SRR1158939 | Sensitive | lineage4.8 | None | ERR9787071 | Sensitive | lineage6.1.1 | None | ERR4822558 | Sensitive | lineage4.8 | tm | ERR4800581 | Pre-XDR-TB | lineage2.2.1 | in | SRR24256015 | HR-TB | lineage4.8 | None | ERR4814005 | Sensitive | lineage4.8 | None | ERR7363098 | Sensitive | lineage4.8 | None | ERR4821122 | Sensitive | lineage4.8 | gb | ERR5865966 | MDR-TB | lineage4.8 | None | SRR17406760 | Sensitive | lineage3.1.2 | None | ERR11043604 | Sensitive | lineage4.3.3 | None | ERR3803798 | Sensitive | lineage6.1.1 | None | ERR2517646 | Sensitive | lineage4.8 | nl | SRR13583466 | HR-TB | lineage4.8 | None | SRR28351544 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR28239977 | MDR-TB | lineage4.8 | None | SRR28498463 | Sensitive | lineage4.8 | None | SRR28351454 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR28239696 | HR-TB | lineage4.8 | None | ERR3170434 | Sensitive | lineage5 | gh | SRR6257062 | Sensitive | lineage4.8 | None | ERR4192549 | Sensitive | lineage6.1.1 | None | ERR266538 | Sensitive | lineage6.1.1 | None | ERR551763 | Sensitive | lineage4.8 | de | ERR3803974 | Sensitive | lineage6.1.1 | None | SAMN02231099 | Sensitive | lineage6.3.3 | None | SRR17856676 | Sensitive | lineage3.1.2 | None | SRR1172989 | Sensitive | lineage4.8 | None | ERR1334036 | Sensitive | lineage6.1.1 | None | ERR9786249 | Sensitive | lineage4.1.2.1;lineage6.1.1 | None | SRR21277736 | Sensitive | lineage2.2.1 | None | SRR14802231 | Sensitive | lineage4.8 | None | ERR108464 | HR-TB | lineage4.2.1;lineage4.8 | ru | SRR27450542 | Sensitive | lineage2.2.1.1 | None | ERR11050091 | Sensitive | lineage4.8 | None |
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