Rv3862c - c.-79T>C


Drug resistance types
28 Sensitive 2 RR-TB 38 HR-TB 159 MDR-TB 46 Pre-XDR-TB 0 XDR-TB 5 Other
lineage Counts
lineage Count
lineage1.2.2.1 12
lineage4.3.3 18
lineage4.3.4.2 201
lineage2.2.1 15
lineage3 2
lineage4.3.4.2;lineage4.1.1.1 2
lineage4.8 10
lineage4 2
1
lineage4.5 2
lineage4.9 1
lineage2.2.1.1 2
lineage4.3.2 1
lineage4.3.1 2
lineage4.3.4.2;lineage4.3.3 1
lineage4.3.4.1 3
lineage4.4.1.1;lineage1.2.2.1 2
lineage4.4.2 1
spoligotype Counts
spoligotype Count
None 278
Geographic prevalence
Country level data for this variant is available for 136 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11489040 MDR-TB lineage1.2.2.1 None
ERR133846 Sensitive lineage4.3.3 ru
ERR4812064 MDR-TB lineage4.3.4.2 None
ERR12117900 Pre-XDR-TB lineage4.3.4.2 None
ERR12117986 MDR-TB lineage4.3.4.2 None
ERR4811800 HR-TB lineage4.3.4.2 None
ERR4810795 Pre-XDR-TB lineage2.2.1 None
ERR12117931 MDR-TB lineage4.3.4.2 None
ERR8975046 MDR-TB lineage1.2.2.1 None
ERR6865384 MDR-TB lineage4.3.4.2 None
ERR6865538 HR-TB lineage4.3.4.2 None
ERR6865475 MDR-TB lineage4.3.4.2 None
ERR6865416 MDR-TB lineage4.3.4.2 None
ERR6865990 HR-TB lineage4.3.4.2 None
ERR6865735 MDR-TB lineage4.3.4.2 None
ERR6865796 MDR-TB lineage4.3.4.2 None
ERR6865978 MDR-TB lineage4.3.4.2 None
ERR6865544 MDR-TB lineage4.3.4.2 None
ERR6865980 MDR-TB lineage4.3.4.2 None
ERR6866333 MDR-TB lineage4.3.4.2 None
ERR6866070 MDR-TB lineage4.3.4.2 None
ERR6866134 MDR-TB lineage4.3.4.2 None
ERR6866515 MDR-TB lineage4.3.4.2 None
ERR6866863 MDR-TB lineage4.3.4.2 None
ERR7910844 MDR-TB lineage4.3.4.2 None
ERR688016 Pre-XDR-TB lineage3 None
ERR6879040 Pre-XDR-TB lineage4.3.4.2 None
SRR22873595 MDR-TB lineage2.2.1 None
ERR7910845 MDR-TB lineage4.3.4.2 None
ERR7911358 HR-TB lineage4.3.3 None
ERR7911359 HR-TB lineage4.3.3 None
ERR9029857 MDR-TB lineage4.3.4.2 None
ERR7911360 HR-TB lineage4.3.3 None
ERR9029875 MDR-TB lineage4.3.4.2;lineage4.1.1.1 None
ERR9029859 MDR-TB lineage4.3.4.2 None
ERR9029876 HR-TB lineage4.3.4.2 None
ERR9117712 Sensitive lineage4.3.4.2 None
ERR9285923 Sensitive lineage4.3.4.2 None
SRR10525335 MDR-TB lineage4.8 None
SRR10808884 MDR-TB lineage4.3.4.2 None
SRR10808652 MDR-TB lineage4.3.4.2 None
SRR10854751 MDR-TB lineage4.3.4.2 None
SRR1166317 HR-TB lineage4 None
ERR11050337 HR-TB lineage4.3.3 None
SRR10869049 Sensitive None
ERR11050434 HR-TB lineage4.3.3 None
SRR13870391 Pre-XDR-TB lineage4.3.4.2 None
SRR13591449 Sensitive lineage4.8 None
SRR13870400 Pre-XDR-TB lineage4.3.4.2 None
SRR14164703 Sensitive lineage4.3.4.2 None
SRR13870408 Pre-XDR-TB lineage4.3.4.2 None
SRR19276638 Pre-XDR-TB lineage4.3.4.2 None
SRR16370489 MDR-TB lineage4.3.4.2 None
SRR18337391 Sensitive lineage4.8 None
SRR18337392 Sensitive lineage4.8 None
SRR18337390 Sensitive lineage4.8 None
SRR19276643 Pre-XDR-TB lineage4.3.4.2 None
SRR16370511 MDR-TB lineage4.3.4.2 None
SRR21576538 MDR-TB lineage2.2.1 None
SRR19303796 Other lineage4.3.3 None
SRR21279460 MDR-TB lineage4.5 None
SRR21677869 Other lineage4.9 None
SRR22528586 MDR-TB lineage4.3.3 None
SRR21710727 Sensitive lineage4.3.4.2 None
SRR21722119 Sensitive lineage2.2.1.1 None
ERR11081128 MDR-TB lineage4.3.3 None
ERR11082757 MDR-TB lineage4.3.4.2 None
ERR11243480 Sensitive lineage4.8 None
ERR11083060 MDR-TB lineage4.3.2 None
SRR23938629 MDR-TB lineage4.3.3 None
SRR24710138 MDR-TB lineage4.3.3 None
SRR6280156 Pre-XDR-TB lineage2.2.1 cn
ERR4813718 MDR-TB lineage4.3.4.2 None
SRR6280213 Pre-XDR-TB lineage2.2.1 cn
SRR23691398 Sensitive lineage2.2.1 None
ERR4813490 HR-TB lineage4.3.4.2 None
SRR6280158 Pre-XDR-TB lineage2.2.1 cn
ERR1034679 MDR-TB lineage4.3.3 co
ERR4812836 Pre-XDR-TB lineage4.3.4.2 None
ERR4813011 Pre-XDR-TB lineage4.3.4.2 None
ERR4813135 HR-TB lineage4.3.4.2 None
ERR3014602 Pre-XDR-TB lineage4.3.1 None
ERR1034584 Pre-XDR-TB lineage3 pk
ERR4812875 MDR-TB lineage4.3.4.2 None
ERR4813057 MDR-TB lineage4.3.4.2 None
ERR4813139 Pre-XDR-TB lineage4.3.4.2 None
ERR4813217 Pre-XDR-TB lineage4.3.4.2 None
ERR4813321 MDR-TB lineage4 None
ERR4813596 MDR-TB lineage4.3.4.2 None
ERR4813554 MDR-TB lineage4.3.4.2 None
ERR4813630 Pre-XDR-TB lineage4.3.4.2 None
ERR1034758 HR-TB lineage4.3.4.2 pe
ERR4813666 MDR-TB lineage4.3.4.2 None
ERR212110 Sensitive lineage1.2.2.1 mw
SRR3732590 MDR-TB lineage4.3.4.2 pe
ERR1034784 Pre-XDR-TB lineage4.3.4.2 pe
ERR2184620 MDR-TB lineage4.3.4.2 None
ERR718264 Sensitive lineage4.5 th
ERR11050998 HR-TB lineage4.3.3 None
ERR845937 MDR-TB lineage4.3.4.2 pe
ERR2513231 RR-TB lineage4.3.4.2 None
ERR751582 MDR-TB lineage4.3.4.2 pe
ERR2513611 Sensitive lineage4.3.4.2 None
ERR751547 MDR-TB lineage4.3.4.2 pe
ERR779921 MDR-TB lineage4.3.4.2 pe
ERR779854 MDR-TB lineage4.3.4.2 pe
ERR775351 MDR-TB lineage4.3.4.2 pe
ERR751463 MDR-TB lineage4.3.4.2 pe
ERR751477 HR-TB lineage4.3.4.2 pe
ERR775350 MDR-TB lineage4.3.4.2 pe
ERR775353 MDR-TB lineage4.3.4.2 pe
ERR751536 HR-TB lineage4.3.4.2 pe
ERR751565 MDR-TB lineage4.3.4.2 pe
ERR751368 HR-TB lineage4.3.4.2 pe
ERR779865 MDR-TB lineage4.3.4.2 pe
ERR751572 MDR-TB lineage4.3.4.2 pe
ERR751597 MDR-TB lineage4.3.4.2 pe
ERR751434 MDR-TB lineage4.3.4.2 pe
ERR751563 Pre-XDR-TB lineage4.3.4.2 pe
ERR751425 HR-TB lineage4.3.4.2 pe
ERR751496 MDR-TB lineage4.3.4.2 pe
ERR779885 MDR-TB lineage4.3.4.2 pe
ERR751570 MDR-TB lineage4.3.4.2 pe
ERR779880 MDR-TB lineage4.3.4.2 pe
ERR751396 MDR-TB lineage4.3.4.2;lineage4.3.3 pe
ERR751530 MDR-TB lineage4.3.4.2 pe
ERR751560 Pre-XDR-TB lineage4.3.4.2 pe
ERR751549 MDR-TB lineage4.3.4.2 pe
ERR775342 MDR-TB lineage4.3.4.2 pe
ERR751559 MDR-TB lineage4.3.4.2 pe
ERR751427 MDR-TB lineage4.3.4.2 pe
ERR751482 MDR-TB lineage4.3.4.2 pe
ERR779869 HR-TB lineage4.3.4.2 pe
ERR751574 MDR-TB lineage4.3.4.2 pe
ERR7910843 MDR-TB lineage4.3.4.2 pe
ERR779870 MDR-TB lineage4.3.4.2 pe
ERR7911002 MDR-TB lineage4.3.4.2 pe
ERR7910871 MDR-TB lineage4.3.4.2 pe
ERR7910993 MDR-TB lineage4.3.4.2 pe
ERR7911342 MDR-TB lineage4.3.4.2 pe
ERR2516508 Pre-XDR-TB lineage4.3.4.2 None
ERR7911372 MDR-TB lineage4.3.4.2 pe
SRR2024952 Pre-XDR-TB lineage2.2.1 cn
ERR400411 Sensitive lineage1.2.2.1 gb
ERR2514394 Other lineage4.3.4.2 None
ERR1193744 Sensitive lineage4.3.3 za
SRR2024951 Pre-XDR-TB lineage2.2.1 cn
ERR2516727 MDR-TB lineage2.2.1.1 None
SRR1166137 Pre-XDR-TB lineage4.8 ro
ERR2707180 MDR-TB lineage4.3.4.1 cd
ERR2707001 MDR-TB lineage4.3.3 cd
ERR2707176 MDR-TB lineage4.3.4.1 cd
ERR751426 MDR-TB lineage4.3.4.2 pe
ERR751439 MDR-TB lineage4.3.4.2 pe
SAMEA2533996 RR-TB lineage2.2.1 uz
ERR775387 MDR-TB lineage4.3.4.2 pe
SRR5486886 Pre-XDR-TB lineage4.8 None
ERR751513 HR-TB lineage4.3.4.2 pe
ERR751608 MDR-TB lineage4.3.4.2 pe
ERR4822284 Pre-XDR-TB lineage2.2.1 None
ERR2516480 Pre-XDR-TB lineage4.3.4.2 pe
ERR2516424 Pre-XDR-TB lineage4.3.4.2 pe
SRR5894882 MDR-TB lineage2.2.1 None
ERR2516572 Pre-XDR-TB lineage4.3.4.2 pe
ERR2516412 Pre-XDR-TB lineage4.3.4.2 pe
ERR279467 Sensitive lineage4.3.3 None
ERR2516696 Pre-XDR-TB lineage4.3.4.2 pe
ERR2516478 Pre-XDR-TB lineage4.3.4.2 pe
ERR2516463 Pre-XDR-TB lineage4.3.4.2 pe
ERR4811335 Pre-XDR-TB lineage2.2.1 cn
SRR6046873 Sensitive lineage1.2.2.1 None
ERR1633785 Sensitive lineage4.3.3 za
ERR2510877 MDR-TB lineage4.3.4.2 it
ERR2510139 HR-TB lineage4.3.4.2 pe
ERR4811777 MDR-TB lineage4.3.4.2 pe
ERR4811666 MDR-TB lineage4.3.4.2 pe
ERR3148055 MDR-TB lineage4.3.4.2 None
ERR4812735 HR-TB lineage4.3.4.2 pe
ERR2510200 HR-TB lineage4.3.4.2 pe
ERR2510140 MDR-TB lineage4.3.4.2 pe
ERR4811965 HR-TB lineage4.3.4.2 pe
ERR4813535 MDR-TB lineage4.3.4.2 pe
ERR4829671 MDR-TB lineage4.3.1 it
ERR2510235 MDR-TB lineage4.3.4.2 pe
ERR2510132 MDR-TB lineage4.3.4.2 pe
ERR4829756 MDR-TB lineage4.3.4.2 it
ERR2510217 MDR-TB lineage4.3.4.2 pe
ERR2510202 MDR-TB lineage4.3.4.2 pe
ERR2510196 MDR-TB lineage4.3.4.2 pe
ERR2510224 MDR-TB lineage4.3.4.2 pe
ERR4813358 MDR-TB lineage4.3.4.2 pe
ERR2510170 MDR-TB lineage4.3.4.2 pe
ERR4813349 MDR-TB lineage4.3.4.2 pe
ERR4813469 MDR-TB lineage4.3.4.2 pe
ERR4813386 MDR-TB lineage4.3.4.2 pe
ERR4813417 MDR-TB lineage4.3.4.2 pe
ERR4813449 MDR-TB lineage4.3.4.2 pe
SRR6785526 Sensitive lineage4.3.4.2 None
ERR4812896 MDR-TB lineage4.3.4.2 pe
ERR4813056 HR-TB lineage4.3.4.2 pe
ERR11465711 Other lineage4.4.1.1;lineage1.2.2.1 None
ERR4813156 Pre-XDR-TB lineage4.3.4.2 pe
ERR4812356 MDR-TB lineage4.3.4.2 pe
ERR4813195 Pre-XDR-TB lineage4.3.4.2 pe
ERR4813281 HR-TB lineage4.3.4.2 pe
ERR4812752 MDR-TB lineage4.3.4.2 pe
ERR3287768 MDR-TB lineage4.3.4.2 pe
ERR3287616 HR-TB lineage4.3.4.2 pe
ERR3287767 MDR-TB lineage4.3.4.2 pe
ERR3287609 HR-TB lineage4.3.4.2 pe
ERR3287752 MDR-TB lineage4.3.4.2 pe
ERR3287770 MDR-TB lineage4.3.4.2 pe
ERR3287615 MDR-TB lineage4.3.4.2 pe
ERR3287460 HR-TB lineage4.3.4.2 pe
ERR3287619 MDR-TB lineage4.3.4.2 pe
ERR3287688 MDR-TB lineage4.3.4.2 pe
ERR3287492 HR-TB lineage4.3.4.2 pe
ERR3287659 HR-TB lineage4.3.4.2 pe
ERR3287465 MDR-TB lineage4.3.4.2 pe
ERR3287454 MDR-TB lineage4.3.4.2 pe
ERR3287490 MDR-TB lineage4.3.4.2 pe
ERR3287666 MDR-TB lineage4.3.4.2 pe
ERR3287472 MDR-TB lineage4.3.4.2 pe
ERR3287478 HR-TB lineage4.3.4.2 pe
ERR3287497 Pre-XDR-TB lineage4.3.4.2 pe
ERR3287838 Pre-XDR-TB lineage4.3.4.2 pe
ERR3287483 MDR-TB lineage4.3.4.2 pe
ERR3287394 Pre-XDR-TB lineage4.3.4.2 pe
ERR3287835 MDR-TB lineage4.3.4.2 pe
ERR2184370 MDR-TB lineage4.3.4.2 pe
ERR3287840 MDR-TB lineage4.3.4.2 pe
ERR3287598 HR-TB lineage4.3.4.2 pe
ERR494998 Sensitive lineage4.3.3 None
ERR4820218 Sensitive lineage4.3.4.1 gb
ERR2510679 MDR-TB lineage4.3.4.2 it
SRR9738489 MDR-TB lineage4.8 None
ERR11488913 MDR-TB lineage1.2.2.1 None
SRR7592387 Pre-XDR-TB lineage4.8 None
ERR11489059 MDR-TB lineage1.2.2.1 None
ERR11488840 MDR-TB lineage1.2.2.1 None
ERR11489039 MDR-TB lineage1.2.2.1 None
DRR473798 Sensitive lineage2.2.1 None
ERR4818231 Sensitive lineage1.2.2.1 gb
ERR12117896 MDR-TB lineage4.3.4.2 None
ERR2514175 Sensitive lineage1.2.2.1 gb
ERR12117964 MDR-TB lineage4.3.4.2 None
ERR12117916 MDR-TB lineage4.3.4.2 None
ERR12118022 MDR-TB lineage4.3.4.2 None
ERR11465714 Other lineage4.4.1.1;lineage1.2.2.1 None
ERR2513264 Sensitive lineage4.3.4.2 gb
ERR12117975 MDR-TB lineage4.3.4.2 None
ERR3273130 Pre-XDR-TB lineage4.4.2 None
ERR3287549 HR-TB lineage4.3.4.2 None
ERR3287462 HR-TB lineage4.3.4.2 None
ERR3287502 MDR-TB lineage4.3.4.2 None
ERR3287501 MDR-TB lineage4.3.4.2;lineage4.1.1.1 None
ERR3287570 MDR-TB lineage4.3.4.2 None
ERR3287566 HR-TB lineage4.3.4.2 None
ERR3287567 MDR-TB lineage4.3.4.2 None
ERR3287580 Pre-XDR-TB lineage4.3.4.2 None
ERR3287572 MDR-TB lineage4.3.4.2 None
ERR3287573 MDR-TB lineage4.3.4.2 None
ERR3287583 Pre-XDR-TB lineage4.3.4.2 None
ERR4024559 HR-TB lineage4.3.4.2 None
ERR3287661 MDR-TB lineage4.3.4.2 None
ERR3287687 MDR-TB lineage4.3.4.2 None
ERR4024744 MDR-TB lineage4.3.4.2 None
ERR4024571 MDR-TB lineage4.3.4.2 None
ERR4024921 MDR-TB lineage4.3.4.2 None
ERR4024763 MDR-TB lineage4.3.4.2 None
ERR4024783 HR-TB lineage4.3.4.2 None
ERR4024759 MDR-TB lineage4.3.4.2 None
ERR4025134 MDR-TB lineage4.3.4.2 None
ERR4025027 MDR-TB lineage4.3.4.2 None
ERR4178182 MDR-TB lineage4.3.4.2 None
ERR4276866 Pre-XDR-TB lineage2.2.1 None
ERR4178299 MDR-TB lineage4.3.4.2 None
ERR11488908 MDR-TB lineage1.2.2.1 None