lineage | Count |
---|---|
lineage3 | 5 |
lineage2.2.1 | 109 |
lineage2.2.1.1 | 12 |
lineage4.5 | 2 |
lineage4.6.1.1 | 5 |
lineage4.8 | 13 |
lineage4.1.2.1 | 14 |
lineage1.1.3.3 | 1 |
lineage4.3.4.1 | 2 |
lineage4.2.2.2 | 1 |
lineage4.3.3 | 2 |
lineage4.4.1.1 | 4 |
lineage2.2.1;lineage3 | 2 |
lineage4.1.2.1;lineage4.8 | 1 |
lineage2.2.2 | 5 |
lineage1.1.2 | 1 |
lineage1.2.1.1 | 3 |
lineage4.4.2 | 3 |
lineage3.1.3 | 3 |
lineage4.6.2.2 | 4 |
lineage1.1.3.1 | 1 |
lineage2.2.1;lineage3.1.2 | 1 |
lineage4.3.2 | 1 |
lineage4.9 | 1 |
lineage4.4.1.2 | 2 |
lineage4.1.2.1;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 199 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR10225488 | Sensitive | lineage3 | None |
SRR25207110 | XDR-TB | lineage2.2.1 | None |
ERR4822349 | Pre-XDR-TB | lineage2.2.1.1 | None |
ERR9119248 | Other | lineage2.2.1 | None |
SRR28044998 | Sensitive | lineage3 | None |
ERR6362764 | MDR-TB | lineage2.2.1 | None |
ERR751989 | Sensitive | lineage4.5 | None |
ERR6358867 | MDR-TB | lineage4.6.1.1 | None |
SRR14801437 | Sensitive | lineage4.8 | None |
SRR16156825 | MDR-TB | lineage2.2.1 | None |
SRR22048543 | Sensitive | lineage4.8 | None |
ERR4178264 | MDR-TB | lineage4.1.2.1 | None |
ERR11798602 | MDR-TB | lineage2.2.1 | None |
ERR4797556 | Pre-XDR-TB | lineage2.2.1 | in |
ERR4797657 | Pre-XDR-TB | lineage2.2.1.1 | in |
SRR21576586 | MDR-TB | lineage2.2.1 | None |
SRR6797831 | Sensitive | lineage2.2.1 | None |
SRR24083726 | Sensitive | lineage2.2.1 | None |
SRR12420739 | MDR-TB | lineage2.2.1 | None |
SRR26399935 | Other | lineage2.2.1 | None |
SRR29096967 | HR-TB | lineage1.1.3.3 | None |
SRR16089912 | HR-TB | lineage4.8 | None |
ERR11811362 | Sensitive | lineage4.8 | None |
SRR29093124 | Pre-XDR-TB | lineage2.2.1.1 | None |
ERR6865912 | MDR-TB | lineage4.1.2.1 | None |
SRR29096108 | Sensitive | lineage2.2.1 | None |
ERR13291098 | Pre-XDR-TB | lineage2.2.1 | None |
SRR13583326 | MDR-TB | lineage4.3.4.1 | None |
SRR8380892 | MDR-TB | lineage4.2.2.2 | in |
SRR26399997 | Other | lineage2.2.1 | None |
SRR13870427 | Pre-XDR-TB | lineage4.1.2.1 | None |
ERR13266893 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4797882 | Sensitive | lineage4.8 | in |
SRR22137403 | XDR-TB | lineage2.2.1 | None |
ERR13266635 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4799808 | Pre-XDR-TB | lineage2.2.1 | in |
ERR13261117 | Pre-XDR-TB | lineage2.2.1 | None |
SRR28470233 | HR-TB | lineage4.8 | None |
ERR4798173 | Pre-XDR-TB | lineage2.2.1 | in |
ERR11044728 | Sensitive | lineage4.3.3 | None |
ERR13266808 | Pre-XDR-TB | lineage2.2.1.1 | None |
ERR4799935 | Pre-XDR-TB | lineage2.2.1 | in |
SRR26937047 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4800185 | Pre-XDR-TB | lineage2.2.1 | in |
SRR7645956 | Pre-XDR-TB | lineage2.2.1 | None |
SRR9588014 | MDR-TB | lineage4.4.1.1 | None |
ERR13267003 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29356796 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4799502 | Pre-XDR-TB | lineage2.2.1.1 | in |
SRR14801666 | MDR-TB | lineage2.2.1 | None |
SRR21576568 | MDR-TB | lineage2.2.1 | None |
SRR1181160 | Sensitive | lineage2.2.1 | None |
ERR13290827 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1181087 | Sensitive | lineage2.2.1 | None |
SRR12142414 | MDR-TB | lineage2.2.1 | None |
SRR12420308 | HR-TB | lineage2.2.1 | None |
DRR473747 | HR-TB | lineage2.2.1.1 | None |
ERR5865248 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11811381 | Sensitive | lineage4.8 | None |
ERR7911352 | MDR-TB | lineage4.1.2.1 | None |
SRR3105742 | Pre-XDR-TB | lineage2.2.1;lineage3 | None |
SRR22248475 | Sensitive | lineage4.1.2.1;lineage4.8 | None |
SRR28046144 | MDR-TB | lineage2.2.1 | None |
SRR28467020 | Pre-XDR-TB | lineage2.2.2 | None |
SRR28496680 | HR-TB | lineage4.8 | None |
SRR28044490 | Sensitive | lineage1.1.2 | None |
ERR751421 | MDR-TB | lineage4.1.2.1 | pe |
SAMN03246351 | MDR-TB | lineage2.2.1 | cn |
SRR21031731 | Sensitive | lineage2.2.1 | None |
SRR26936992 | MDR-TB | lineage2.2.1 | None |
ERR4811128 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR16156826 | MDR-TB | lineage2.2.1 | None |
ERR4798934 | MDR-TB | lineage2.2.1 | in |
ERR3287695 | MDR-TB | lineage4.1.2.1 | pe |
SRR6824611 | MDR-TB | lineage2.2.1 | cn |
SRR6824295 | MDR-TB | lineage2.2.1 | cn |
SRR13870416 | Pre-XDR-TB | lineage4.1.2.1 | None |
ERR7911353 | MDR-TB | lineage4.1.2.1 | None |
SRR29096865 | RR-TB | lineage4.4.1.1 | None |
ERR13245232 | Pre-XDR-TB | lineage2.2.1.1 | None |
ERR13258004 | Pre-XDR-TB | lineage2.2.1.1 | None |
SRR27450452 | Sensitive | lineage2.2.1 | None |
SRR28351470 | Pre-XDR-TB | lineage2.2.1 | None |
SRR5065526 | MDR-TB | lineage2.2.1 | vn |
ERR4810965 | MDR-TB | lineage2.2.2 | cn |
SRR22461592 | MDR-TB | lineage4.1.2.1 | None |
ERR4800226 | Pre-XDR-TB | lineage2.2.1 | in |
ERR2517328 | Other | lineage1.2.1.1 | nl |
SRR25515275 | Sensitive | lineage2.2.1 | None |
ERR4800354 | Pre-XDR-TB | lineage2.2.1 | in |
SRR25628606 | MDR-TB | lineage4.5 | None |
SRR12420432 | MDR-TB | lineage2.2.1 | None |
SRR22175209 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1723994 | Pre-XDR-TB | lineage4.4.2 | cn |
ERR3275193 | Other | lineage1.2.1.1 | nl |
ERR2512536 | Sensitive | lineage3.1.3 | None |
SRR22250105 | Sensitive | lineage2.2.1 | None |
ERR4822370 | Pre-XDR-TB | lineage2.2.1.1 | None |
ERR4798183 | Pre-XDR-TB | lineage2.2.1 | in |
ERR11082341 | MDR-TB | lineage2.2.1 | None |
ERR4810622 | XDR-TB | lineage2.2.1 | cn |
SRR11444222 | Sensitive | lineage4.6.2.2 | None |
SRR1723608 | MDR-TB | lineage2.2.1 | None |
ERR4830286 | Other | lineage2.2.1 | vn |
SRR671831 | MDR-TB | lineage4.4.2 | cn |
ERR11050700 | Sensitive | lineage3 | None |
ERR9786231 | Sensitive | lineage4.8 | None |
ERR13266600 | Pre-XDR-TB | lineage2.2.1 | None |
SRR16156843 | MDR-TB | lineage2.2.1 | None |
ERR13266105 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4024824 | MDR-TB | lineage4.1.2.1 | None |
ERR5865250 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4797853 | Sensitive | lineage1.1.3.1 | in |
SRR5153270 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13291472 | HR-TB | lineage4.8 | None |
ERR13258513 | Pre-XDR-TB | lineage2.2.1.1 | None |
ERR13290940 | MDR-TB | lineage2.2.1 | None |
ERR13246292 | Sensitive | lineage2.2.2 | None |
SRR18003044 | MDR-TB | lineage2.2.1 | None |
SRR7535065 | Sensitive | lineage4.6.1.1 | None |
SRR3105800 | Pre-XDR-TB | lineage2.2.1;lineage3 | None |
SRR28409559 | Sensitive | lineage2.2.1 | None |
SRR25534453 | Sensitive | lineage2.2.1 | None |
ERR13265770 | Sensitive | lineage2.2.1 | None |
SRR11444234 | Sensitive | lineage4.6.2.2 | None |
SRR1723607 | MDR-TB | lineage2.2.1 | None |
DRR188548 | Sensitive | lineage2.2.2 | None |
SRR26937056 | MDR-TB | lineage2.2.1 | None |
SRR12420390 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4799314 | Pre-XDR-TB | lineage2.2.1 | in |
ERR5865247 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29230838 | Sensitive | lineage4.3.3 | None |
ERR13266490 | XDR-TB | lineage2.2.1 | None |
ERR9119255 | MDR-TB | lineage2.2.1 | None |
SRR25827364 | XDR-TB | lineage2.2.1;lineage3.1.2 | None |
ERR6358864 | MDR-TB | lineage4.6.1.1 | None |
SRR26400079 | MDR-TB | lineage2.2.1 | None |
ERR13266146 | Pre-XDR-TB | lineage2.2.1 | None |
DRR130084 | Pre-XDR-TB | lineage2.2.1.1 | None |
ERR7911351 | MDR-TB | lineage4.1.2.1 | None |
ERR9119839 | MDR-TB | lineage2.2.1 | None |
SRR22351859 | Pre-XDR-TB | lineage2.2.1 | None |
ERR10610260 | RR-TB | lineage4.4.1.1 | None |
ERR6358710 | MDR-TB | lineage4.6.1.1 | None |
ERR9786156 | Sensitive | lineage4.8 | None |
ERR13291093 | Pre-XDR-TB | lineage2.2.1 | None |
SRR786667 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1180318 | Sensitive | lineage2.2.1 | None |
ERR6866609 | Sensitive | lineage4.3.2 | None |
SRR28393309 | MDR-TB | lineage4.1.2.1 | None |
ERR5865249 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4819048 | Sensitive | lineage4.6.1.1 | None |
SRR29051568 | MDR-TB | lineage4.3.4.1 | None |
SRR29289137 | XDR-TB | lineage3 | None |
SRR25207247 | MDR-TB | lineage2.2.2 | None |
SRR22249392 | Sensitive | lineage4.9 | None |
SRR1180404 | Sensitive | lineage2.2.1 | None |
ERR11068231 | HR-TB | lineage2.2.1 | None |
SRR12420354 | MDR-TB | lineage2.2.1 | None |
SRR26399575 | MDR-TB | lineage2.2.1 | None |
ERR1465894 | Other | lineage4.8 | ch |
ERR2184487 | Sensitive | lineage4.4.1.2 | pe |
ERR2513248 | Sensitive | lineage3.1.3 | gb |
ERR2513313 | Sensitive | lineage3 | gb |
ERR2512600 | HR-TB | lineage4.6.2.2 | gb |
ERR4832006 | MDR-TB | lineage2.2.1 | vn |
ERR4832024 | MDR-TB | lineage2.2.1 | vn |
ERR4830373 | MDR-TB | lineage2.2.1 | vn |
SRR24256015 | HR-TB | lineage4.8 | None |
DRR130086 | Pre-XDR-TB | lineage2.2.1.1 | None |
ERR7737639 | MDR-TB | lineage2.2.1 | None |
SAMN02585901 | Sensitive | lineage2.2.1 | za |
SRR12142372 | MDR-TB | lineage2.2.1 | None |
SRR22249759 | Other | lineage2.2.1 | None |
SRR28351280 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13284029 | MDR-TB | lineage2.2.1 | None |
SRR12420313 | MDR-TB | lineage2.2.1 | None |
SRR5073766 | Sensitive | lineage2.2.1 | vn |
ERR9806807 | RR-TB | lineage4.4.1.1 | None |
ERR2179657 | Pre-XDR-TB | lineage4.4.2 | cn |
SRR1723790 | Sensitive | lineage2.2.1 | cn |
SRR1723791 | Sensitive | lineage2.2.1 | cn |
ERR5865251 | Pre-XDR-TB | lineage2.2.1 | None |
SRR16156837 | MDR-TB | lineage2.2.1 | None |
SRR1723859 | HR-TB | lineage2.2.1 | cn |
ERR9117781 | Sensitive | lineage3.1.3 | None |
SRR1723711 | MDR-TB | lineage2.2.1 | cn |
SRR1723712 | MDR-TB | lineage2.2.1 | cn |
ERR4830004 | MDR-TB | lineage4.6.2.2 | None |
ERR2446488 | Other | lineage1.2.1.1 | nl |
ERR13265547 | Other | lineage2.2.1 | None |
ERR4813625 | HR-TB | lineage4.1.2.1 | None |
SRR25515682 | MDR-TB | lineage2.2.1 | None |
ERR13267010 | Pre-XDR-TB | lineage2.2.1 | None |
ERR6865426 | MDR-TB | lineage4.1.2.1 | None |
ERR229978 | Pre-XDR-TB | lineage2.2.1 | ru |
ERR4800480 | Pre-XDR-TB | lineage2.2.1 | in |
SRR10808521 | Sensitive | lineage4.4.1.2 | None |
SRR14782801 | Sensitive | lineage4.1.2.1;lineage4.9 | None |