Rv3862c - c.235delG
Drug resistance types
49 Sensitive
3 RR-TB
12 HR-TB
63 MDR-TB
56 Pre-XDR-TB
6 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 5 |
| lineage2.2.1 | 109 |
| lineage2.2.1.1 | 12 |
| lineage4.5 | 2 |
| lineage4.6.1.1 | 5 |
| lineage4.8 | 13 |
| lineage4.1.2.1 | 14 |
| lineage1.1.3.3 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.3.3 | 2 |
| lineage4.4.1.1 | 4 |
| lineage2.2.1;lineage3 | 2 |
| lineage4.1.2.1;lineage4.8 | 1 |
| lineage2.2.2 | 5 |
| lineage1.1.2 | 1 |
| lineage1.2.1.1 | 3 |
| lineage4.4.2 | 3 |
| lineage3.1.3 | 3 |
| lineage4.6.2.2 | 4 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1;lineage3.1.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.9 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.1.2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 199 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR10225488 | Sensitive | lineage3 | None |
| SRR25207110 | XDR-TB | lineage2.2.1 | None |
| ERR4822349 | Pre-XDR-TB | lineage2.2.1.1 | None |
| ERR9119248 | Other | lineage2.2.1 | None |
| SRR28044998 | Sensitive | lineage3 | None |
| ERR6362764 | MDR-TB | lineage2.2.1 | None |
| ERR751989 | Sensitive | lineage4.5 | None |
| ERR6358867 | MDR-TB | lineage4.6.1.1 | None |
| SRR14801437 | Sensitive | lineage4.8 | None |
| SRR16156825 | MDR-TB | lineage2.2.1 | None |
| SRR22048543 | Sensitive | lineage4.8 | None |
| ERR4178264 | MDR-TB | lineage4.1.2.1 | None |
| ERR11798602 | MDR-TB | lineage2.2.1 | None |
| ERR4797556 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR4797657 | Pre-XDR-TB | lineage2.2.1.1 | in |
| SRR21576586 | MDR-TB | lineage2.2.1 | None |
| SRR6797831 | Sensitive | lineage2.2.1 | None |
| SRR24083726 | Sensitive | lineage2.2.1 | None |
| SRR12420739 | MDR-TB | lineage2.2.1 | None |
| SRR26399935 | Other | lineage2.2.1 | None |
| SRR29096967 | HR-TB | lineage1.1.3.3 | None |
| SRR16089912 | HR-TB | lineage4.8 | None |
| ERR11811362 | Sensitive | lineage4.8 | None |
| SRR29093124 | Pre-XDR-TB | lineage2.2.1.1 | None |
| ERR6865912 | MDR-TB | lineage4.1.2.1 | None |
| SRR29096108 | Sensitive | lineage2.2.1 | None |
| ERR13291098 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR13583326 | MDR-TB | lineage4.3.4.1 | None |
| SRR8380892 | MDR-TB | lineage4.2.2.2 | in |
| SRR26399997 | Other | lineage2.2.1 | None |
| SRR13870427 | Pre-XDR-TB | lineage4.1.2.1 | None |
| ERR13266893 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4797882 | Sensitive | lineage4.8 | in |
| SRR22137403 | XDR-TB | lineage2.2.1 | None |
| ERR13266635 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4799808 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR13261117 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR28470233 | HR-TB | lineage4.8 | None |
| ERR4798173 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR11044728 | Sensitive | lineage4.3.3 | None |
| ERR13266808 | Pre-XDR-TB | lineage2.2.1.1 | None |
| ERR4799935 | Pre-XDR-TB | lineage2.2.1 | in |
| SRR26937047 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4800185 | Pre-XDR-TB | lineage2.2.1 | in |
| SRR7645956 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR9588014 | MDR-TB | lineage4.4.1.1 | None |
| ERR13267003 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR29356796 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4799502 | Pre-XDR-TB | lineage2.2.1.1 | in |
| SRR14801666 | MDR-TB | lineage2.2.1 | None |
| SRR21576568 | MDR-TB | lineage2.2.1 | None |
| SRR1181160 | Sensitive | lineage2.2.1 | None |
| ERR13290827 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR1181087 | Sensitive | lineage2.2.1 | None |
| SRR12142414 | MDR-TB | lineage2.2.1 | None |
| SRR12420308 | HR-TB | lineage2.2.1 | None |
| DRR473747 | HR-TB | lineage2.2.1.1 | None |
| ERR5865248 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR11811381 | Sensitive | lineage4.8 | None |
| ERR7911352 | MDR-TB | lineage4.1.2.1 | None |
| SRR3105742 | Pre-XDR-TB | lineage2.2.1;lineage3 | None |
| SRR22248475 | Sensitive | lineage4.1.2.1;lineage4.8 | None |
| SRR28046144 | MDR-TB | lineage2.2.1 | None |
| SRR28467020 | Pre-XDR-TB | lineage2.2.2 | None |
| SRR28496680 | HR-TB | lineage4.8 | None |
| SRR28044490 | Sensitive | lineage1.1.2 | None |
| ERR751421 | MDR-TB | lineage4.1.2.1 | pe |
| SAMN03246351 | MDR-TB | lineage2.2.1 | cn |
| SRR21031731 | Sensitive | lineage2.2.1 | None |
| SRR26936992 | MDR-TB | lineage2.2.1 | None |
| ERR4811128 | Pre-XDR-TB | lineage2.2.1 | cn |
| SRR16156826 | MDR-TB | lineage2.2.1 | None |
| ERR4798934 | MDR-TB | lineage2.2.1 | in |
| ERR3287695 | MDR-TB | lineage4.1.2.1 | pe |
| SRR6824611 | MDR-TB | lineage2.2.1 | cn |
| SRR6824295 | MDR-TB | lineage2.2.1 | cn |
| SRR13870416 | Pre-XDR-TB | lineage4.1.2.1 | None |
| ERR7911353 | MDR-TB | lineage4.1.2.1 | None |
| SRR29096865 | RR-TB | lineage4.4.1.1 | None |
| ERR13245232 | Pre-XDR-TB | lineage2.2.1.1 | None |
| ERR13258004 | Pre-XDR-TB | lineage2.2.1.1 | None |
| SRR27450452 | Sensitive | lineage2.2.1 | None |
| SRR28351470 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR5065526 | MDR-TB | lineage2.2.1 | vn |
| ERR4810965 | MDR-TB | lineage2.2.2 | cn |
| SRR22461592 | MDR-TB | lineage4.1.2.1 | None |
| ERR4800226 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR2517328 | Other | lineage1.2.1.1 | nl |
| SRR25515275 | Sensitive | lineage2.2.1 | None |
| ERR4800354 | Pre-XDR-TB | lineage2.2.1 | in |
| SRR25628606 | MDR-TB | lineage4.5 | None |
| SRR12420432 | MDR-TB | lineage2.2.1 | None |
| SRR22175209 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR1723994 | Pre-XDR-TB | lineage4.4.2 | cn |
| ERR3275193 | Other | lineage1.2.1.1 | nl |
| ERR2512536 | Sensitive | lineage3.1.3 | None |
| SRR22250105 | Sensitive | lineage2.2.1 | None |
| ERR4822370 | Pre-XDR-TB | lineage2.2.1.1 | None |
| ERR4798183 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR11082341 | MDR-TB | lineage2.2.1 | None |
| ERR4810622 | XDR-TB | lineage2.2.1 | cn |
| SRR11444222 | Sensitive | lineage4.6.2.2 | None |
| SRR1723608 | MDR-TB | lineage2.2.1 | None |
| ERR4830286 | Other | lineage2.2.1 | vn |
| SRR671831 | MDR-TB | lineage4.4.2 | cn |
| ERR11050700 | Sensitive | lineage3 | None |
| ERR9786231 | Sensitive | lineage4.8 | None |
| ERR13266600 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR16156843 | MDR-TB | lineage2.2.1 | None |
| ERR13266105 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4024824 | MDR-TB | lineage4.1.2.1 | None |
| ERR5865250 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4797853 | Sensitive | lineage1.1.3.1 | in |
| SRR5153270 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR13291472 | HR-TB | lineage4.8 | None |
| ERR13258513 | Pre-XDR-TB | lineage2.2.1.1 | None |
| ERR13290940 | MDR-TB | lineage2.2.1 | None |
| ERR13246292 | Sensitive | lineage2.2.2 | None |
| SRR18003044 | MDR-TB | lineage2.2.1 | None |
| SRR7535065 | Sensitive | lineage4.6.1.1 | None |
| SRR3105800 | Pre-XDR-TB | lineage2.2.1;lineage3 | None |
| SRR28409559 | Sensitive | lineage2.2.1 | None |
| SRR25534453 | Sensitive | lineage2.2.1 | None |
| ERR13265770 | Sensitive | lineage2.2.1 | None |
| SRR11444234 | Sensitive | lineage4.6.2.2 | None |
| SRR1723607 | MDR-TB | lineage2.2.1 | None |
| DRR188548 | Sensitive | lineage2.2.2 | None |
| SRR26937056 | MDR-TB | lineage2.2.1 | None |
| SRR12420390 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4799314 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR5865247 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR29230838 | Sensitive | lineage4.3.3 | None |
| ERR13266490 | XDR-TB | lineage2.2.1 | None |
| ERR9119255 | MDR-TB | lineage2.2.1 | None |
| SRR25827364 | XDR-TB | lineage2.2.1;lineage3.1.2 | None |
| ERR6358864 | MDR-TB | lineage4.6.1.1 | None |
| SRR26400079 | MDR-TB | lineage2.2.1 | None |
| ERR13266146 | Pre-XDR-TB | lineage2.2.1 | None |
| DRR130084 | Pre-XDR-TB | lineage2.2.1.1 | None |
| ERR7911351 | MDR-TB | lineage4.1.2.1 | None |
| ERR9119839 | MDR-TB | lineage2.2.1 | None |
| SRR22351859 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR10610260 | RR-TB | lineage4.4.1.1 | None |
| ERR6358710 | MDR-TB | lineage4.6.1.1 | None |
| ERR9786156 | Sensitive | lineage4.8 | None |
| ERR13291093 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR786667 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR1180318 | Sensitive | lineage2.2.1 | None |
| ERR6866609 | Sensitive | lineage4.3.2 | None |
| SRR28393309 | MDR-TB | lineage4.1.2.1 | None |
| ERR5865249 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4819048 | Sensitive | lineage4.6.1.1 | None |
| SRR29051568 | MDR-TB | lineage4.3.4.1 | None |
| SRR29289137 | XDR-TB | lineage3 | None |
| SRR25207247 | MDR-TB | lineage2.2.2 | None |
| SRR22249392 | Sensitive | lineage4.9 | None |
| SRR1180404 | Sensitive | lineage2.2.1 | None |
| ERR11068231 | HR-TB | lineage2.2.1 | None |
| SRR12420354 | MDR-TB | lineage2.2.1 | None |
| SRR26399575 | MDR-TB | lineage2.2.1 | None |
| ERR1465894 | Other | lineage4.8 | ch |
| ERR2184487 | Sensitive | lineage4.4.1.2 | pe |
| ERR2513248 | Sensitive | lineage3.1.3 | gb |
| ERR2513313 | Sensitive | lineage3 | gb |
| ERR2512600 | HR-TB | lineage4.6.2.2 | gb |
| ERR4832006 | MDR-TB | lineage2.2.1 | vn |
| ERR4832024 | MDR-TB | lineage2.2.1 | vn |
| ERR4830373 | MDR-TB | lineage2.2.1 | vn |
| SRR24256015 | HR-TB | lineage4.8 | None |
| DRR130086 | Pre-XDR-TB | lineage2.2.1.1 | None |
| ERR7737639 | MDR-TB | lineage2.2.1 | None |
| SAMN02585901 | Sensitive | lineage2.2.1 | za |
| SRR12142372 | MDR-TB | lineage2.2.1 | None |
| SRR22249759 | Other | lineage2.2.1 | None |
| SRR28351280 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR13284029 | MDR-TB | lineage2.2.1 | None |
| SRR12420313 | MDR-TB | lineage2.2.1 | None |
| SRR5073766 | Sensitive | lineage2.2.1 | vn |
| ERR9806807 | RR-TB | lineage4.4.1.1 | None |
| ERR2179657 | Pre-XDR-TB | lineage4.4.2 | cn |
| SRR1723790 | Sensitive | lineage2.2.1 | cn |
| SRR1723791 | Sensitive | lineage2.2.1 | cn |
| ERR5865251 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR16156837 | MDR-TB | lineage2.2.1 | None |
| SRR1723859 | HR-TB | lineage2.2.1 | cn |
| ERR9117781 | Sensitive | lineage3.1.3 | None |
| SRR1723711 | MDR-TB | lineage2.2.1 | cn |
| SRR1723712 | MDR-TB | lineage2.2.1 | cn |
| ERR4830004 | MDR-TB | lineage4.6.2.2 | None |
| ERR2446488 | Other | lineage1.2.1.1 | nl |
| ERR13265547 | Other | lineage2.2.1 | None |
| ERR4813625 | HR-TB | lineage4.1.2.1 | None |
| SRR25515682 | MDR-TB | lineage2.2.1 | None |
| ERR13267010 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR6865426 | MDR-TB | lineage4.1.2.1 | None |
| ERR229978 | Pre-XDR-TB | lineage2.2.1 | ru |
| ERR4800480 | Pre-XDR-TB | lineage2.2.1 | in |
| SRR10808521 | Sensitive | lineage4.4.1.2 | None |
| SRR14782801 | Sensitive | lineage4.1.2.1;lineage4.9 | None |
