Rv3862c - p.Cys53Gly
Drug resistance types
75 Sensitive
8 RR-TB
20 HR-TB
77 MDR-TB
62 Pre-XDR-TB
8 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1;lineage3 | 1 |
| lineage3 | 7 |
| lineage2.2.1 | 170 |
| lineage4.8 | 6 |
| lineage4.1.2.1 | 10 |
| lineage4.3.4.1 | 4 |
| lineage1.1.2 | 3 |
| lineage4.8.1 | 8 |
| lineage2.2.2 | 11 |
| lineage4.1.1.1 | 6 |
| lineage1.1.3.3;lineage2.2.1 | 1 |
| lineage2.2.1.1 | 7 |
| lineage4.5 | 4 |
| lineage4.4.1.1 | 3 |
| lineage4.3.2 | 2 |
| lineage2.1 | 2 |
| lineage4.9 | 2 |
| lineage4.1.4 | 1 |
| lineage3;lineage4.5 | 1 |
| lineage4.3.3 | 1 |
| lineage4.4.2 | 1 |
| lineage2.2.1.1;lineage2.2.1.2;lineage3 | 1 |
| lineage4.2.2 | 1 |
| lineage1.2.2.2;lineage2.2.1 | 1 |
| lineage4.1.1 | 2 |
| lineage3.1.1 | 3 |
| lineage4 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.3.3;lineage4.8 | 1 |
| lineage4.6.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 264 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR25827306 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR3275874 | MDR-TB | lineage3 | nl | ERR13249446 | Other | lineage2.2.1 | None | SRR10380008 | MDR-TB | lineage2.2.1 | None | SRR10040277 | MDR-TB | lineage2.2.1 | None | SRR16156765 | Pre-XDR-TB | lineage2.2.1 | None | ERR13246474 | Sensitive | lineage2.2.1 | None | SRR25534141 | Sensitive | lineage2.2.1 | None | ERR553098 | MDR-TB | lineage2.2.1 | None | ERR4814362 | Other | lineage4.8 | None | DRR034493 | Sensitive | lineage2.2.1 | None | SRR28859667 | Sensitive | lineage4.1.2.1 | None | SRR14519999 | MDR-TB | lineage4.3.4.1 | None | SRR26112814 | RR-TB | lineage2.2.1 | None | ERR13266954 | HR-TB | lineage1.1.2 | None | ERR13261073 | Pre-XDR-TB | lineage2.2.1 | None | SRR29055696 | MDR-TB | lineage4.8.1 | None | DRR473934 | HR-TB | lineage2.2.1 | None | SRR19295646 | MDR-TB | lineage1.1.2 | None | SRR29273627 | MDR-TB | lineage4.1.2.1 | None | SRR29273669 | MDR-TB | lineage4.1.2.1 | None | SRR21708942 | Sensitive | lineage2.2.1 | None | SRR17688577 | Sensitive | lineage2.2.1 | None | ERR13258437 | Pre-XDR-TB | lineage2.2.1 | None | ERR13230590 | Sensitive | lineage2.2.1 | None | SRR15723011 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR29055714 | Sensitive | lineage4.1.1.1 | None | SRR27450380 | HR-TB | lineage2.2.1 | None | SRR28868454 | MDR-TB | lineage4.3.4.1 | None | SRR11662691 | Pre-XDR-TB | lineage1.1.3.3;lineage2.2.1 | None | SRR21576580 | Pre-XDR-TB | lineage2.2.1 | None | SRR14519129 | Sensitive | lineage2.2.1.1 | None | SRR29055634 | MDR-TB | lineage4.8.1 | None | ERR13290949 | MDR-TB | lineage2.2.1 | None | ERR4797940 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR2843540 | MDR-TB | lineage2.2.1 | None | ERR4796905 | Pre-XDR-TB | lineage2.2.1 | in | SRR15316055 | Other | lineage2.2.1 | None | ERR4799486 | Sensitive | lineage4.5 | in | ERR3063111 | Sensitive | lineage4.4.1.1 | None | SRR17716880 | Sensitive | lineage2.2.1 | None | ERR13261152 | Pre-XDR-TB | lineage2.2.1 | None | ERR9634260 | MDR-TB | lineage2.2.1 | None | ERR4812245 | MDR-TB | lineage4.3.2 | pe | SRR21675937 | Sensitive | lineage4.1.1.1 | None | ERR4797917 | Pre-XDR-TB | lineage2.2.1 | in | DRR261166 | HR-TB | lineage2.1 | None | ERR13290145 | Sensitive | lineage4.9 | None | SRR28393595 | MDR-TB | lineage2.2.1 | None | SRR28706471 | MDR-TB | lineage2.2.1 | None | SRR28351288 | Sensitive | lineage2.2.1 | None | SRR28045497 | Sensitive | lineage3 | None | ERR5918012 | XDR-TB | lineage2.2.1 | za | ERR4832050 | MDR-TB | lineage2.2.1.1 | None | ERR3794538 | MDR-TB | lineage2.2.1 | None | ERR13289422 | HR-TB | lineage2.2.1 | None | SAMEA2535134 | MDR-TB | lineage2.2.1 | uz | SRR2101411 | Sensitive | lineage2.2.1 | None | SRR1710108 | MDR-TB | lineage2.2.1 | cn | SRR1710076 | Pre-XDR-TB | lineage2.2.2 | cn | ERR2517014 | Pre-XDR-TB | lineage2.2.1 | gb | SRR6824369 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824379 | Pre-XDR-TB | lineage2.2.1 | cn | SRR16058447 | Sensitive | lineage2.2.1 | None | SRR20970002 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232407 | MDR-TB | lineage2.2.1 | None | SRR18003026 | Sensitive | lineage2.2.1 | None | SRR18665463 | Sensitive | lineage4.1.4 | None | SRR6785539 | MDR-TB | lineage2.2.1 | None | SRR25827382 | Pre-XDR-TB | lineage2.2.1 | None | SRR29385284 | MDR-TB | lineage2.2.1 | None | ERR10748148 | XDR-TB | lineage2.2.1 | None | ERR13266806 | HR-TB | lineage3;lineage4.5 | None | SRR29055664 | MDR-TB | lineage4.8.1 | None | SRR21277831 | HR-TB | lineage2.2.1 | None | SRR24256225 | MDR-TB | lineage4.3.3 | None | SRR5073760 | Sensitive | lineage2.2.1 | vn | SRR5073910 | HR-TB | lineage4.4.2 | vn | SRR20969359 | Pre-XDR-TB | lineage2.2.1 | None | SRR5074148 | Sensitive | lineage2.2.1 | vn | ERR2843497 | MDR-TB | lineage2.2.1 | None | SRR25827558 | XDR-TB | lineage2.2.1.1;lineage2.2.1.2;lineage3 | None | SRR29017296 | Sensitive | lineage2.2.1 | None | ERR11068632 | Pre-XDR-TB | lineage2.2.1 | None | SAMN03246584 | Pre-XDR-TB | lineage2.2.1 | cn | SRR15723024 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992831 | XDR-TB | lineage2.2.1 | None | ERR9993068 | XDR-TB | lineage2.2.1 | None | ERR2515995 | MDR-TB | lineage4.1.1.1 | za | ERR6866607 | Sensitive | lineage4.3.2 | None | SRR15316249 | Sensitive | lineage2.2.2 | None | SRR15723258 | HR-TB | lineage2.2.1 | None | SRR24083625 | Sensitive | lineage2.2.1 | None | SRR8217903 | Sensitive | lineage2.2.1 | None | SRR6511609 | MDR-TB | lineage4.1.2.1 | None | SRR21277378 | Sensitive | lineage2.2.1 | None | ERR11082589 | Sensitive | lineage4.5 | None | ERR9806678 | RR-TB | lineage3 | None | ERR3794408 | MDR-TB | lineage2.2.1 | None | DRR188807 | HR-TB | lineage2.2.1 | None | SRR13591340 | Sensitive | lineage4.8 | None | SRR22251636 | Sensitive | lineage2.2.1 | None | SRR1723619 | Pre-XDR-TB | lineage2.2.1 | cn | SRR29231164 | Sensitive | lineage2.2.1 | None | SRR29055924 | MDR-TB | lineage4.8.1 | None | ERR13290795 | Pre-XDR-TB | lineage2.2.1 | None | SRR26937100 | MDR-TB | lineage2.2.1 | None | SRR24710160 | MDR-TB | lineage2.2.1 | None | SRR23938594 | MDR-TB | lineage2.2.1 | None | ERR13261482 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096566 | MDR-TB | lineage2.2.1 | None | ERR4827848 | Sensitive | lineage4.5 | None | SRR6896558 | Sensitive | lineage2.2.1 | None | DRR473822 | Other | lineage2.2.1 | None | SRR16156781 | MDR-TB | lineage2.2.1 | None | SRR26558631 | HR-TB | lineage2.2.1 | None | SRR29772796 | Pre-XDR-TB | lineage2.2.1 | None | ERR4781456 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13290974 | HR-TB | lineage2.2.1 | None | ERR9285788 | Sensitive | lineage2.2.1 | None | SRR29051447 | MDR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | ERR9125625 | Sensitive | lineage2.2.1 | None | SRR5074294 | Sensitive | lineage4.4.1.1 | None | SRR17703710 | Sensitive | lineage4.2.2 | None | SRR28860133 | Sensitive | lineage4.1.2.1 | None | SRR17703717 | Sensitive | lineage2.2.1 | None | SRR10305649 | Pre-XDR-TB | lineage2.2.1 | None | SRR18511605 | Other | lineage2.2.1 | None | SRR12420328 | MDR-TB | lineage2.2.1 | None | ERR9992898 | XDR-TB | lineage1.2.2.2;lineage2.2.1 | None | ERR4797393 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800363 | Pre-XDR-TB | lineage2.2.1 | in | SRR21277760 | Sensitive | lineage2.2.1 | None | ERR13267001 | HR-TB | lineage2.2.2 | None | SRR25515446 | Pre-XDR-TB | lineage2.2.1 | None | SRR25514932 | Other | lineage2.2.1 | None | ERR11798607 | MDR-TB | lineage2.2.1 | None | ERR553098_ERR553097_ERR553096 | MDR-TB | lineage2.2.1 | None | ERR4800591 | Pre-XDR-TB | lineage2.2.1 | in | ERR2513460 | Pre-XDR-TB | lineage2.2.1 | gb | SRR29055689 | MDR-TB | lineage4.8.1 | None | SRR6046278 | Sensitive | lineage4.9 | gb | SRR17712092 | Sensitive | lineage2.2.1 | None | SRR1723865 | Pre-XDR-TB | lineage2.2.1 | None | ERR2864278 | MDR-TB | lineage4.1.2.1 | pt | ERR4811100 | Sensitive | lineage2.2.1.1 | cn | DRR130113 | Pre-XDR-TB | lineage2.2.1 | None | DRR188820 | Other | lineage2.2.1 | None | SRR28351269 | Pre-XDR-TB | lineage2.2.1 | None | SRR28339289 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737663 | MDR-TB | lineage2.2.1 | None | ERR4828360 | MDR-TB | lineage2.2.1 | vn | ERR4828411 | MDR-TB | lineage2.2.1 | vn | ERR4830984 | Pre-XDR-TB | lineage2.2.1 | np | ERR4828743 | Sensitive | lineage2.2.1 | vn | ERR9030256 | RR-TB | lineage2.2.1.1 | None | SRR16157052 | MDR-TB | lineage2.2.1 | None | ERR8976106 | Sensitive | lineage2.2.1 | None | ERR2510599 | MDR-TB | lineage4.8 | None | SRR6824407 | Pre-XDR-TB | lineage2.2.1 | cn | SRR16157044 | Other | lineage2.2.1 | None | SRR7646001 | Pre-XDR-TB | lineage2.2.1 | None | SRR26159044 | MDR-TB | lineage1.1.2 | None | ERR13258494 | Pre-XDR-TB | lineage2.2.1 | None | ERR13291717 | Sensitive | lineage2.2.1 | None | ERR13260658 | Sensitive | lineage4.1.2.1 | None | SRR21277634 | Sensitive | lineage2.2.1 | None | SRR22249839 | Sensitive | lineage2.2.1 | None | SRR5007183 | MDR-TB | lineage4.3.4.1 | None | SRR10305982 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290796 | Pre-XDR-TB | lineage2.2.1 | None | ERR9029390 | Sensitive | lineage2.2.1 | None | SRR21691144 | MDR-TB | lineage3 | None | SRR20969417 | Sensitive | lineage2.2.1 | None | ERR13289328 | RR-TB | lineage2.2.1 | None | ERR4822358 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827792 | XDR-TB | lineage2.2.1 | None | SRR15315883 | Sensitive | lineage2.2.2 | None | SRR10040189 | RR-TB | lineage2.2.1 | None | ERR3273183 | MDR-TB | lineage2.2.1 | None | SRR28858524 | MDR-TB | lineage4.1.1 | None | SRR6480541 | MDR-TB | lineage2.2.1 | None | ERR13284139 | MDR-TB | lineage2.2.1 | None | ERR13266944 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723552 | Pre-XDR-TB | lineage2.2.1 | cn | SRR26399537 | Sensitive | lineage2.2.1 | None | SRR1723824 | HR-TB | lineage2.2.1 | cn | ERR13284539 | MDR-TB | lineage2.2.1 | None | SRR29055928 | MDR-TB | lineage4.8.1 | None | SRR28860163 | Sensitive | lineage2.2.1 | None | SRR13232638 | Other | lineage4.8 | None | SRR29772462 | MDR-TB | lineage2.2.1 | None | SRR24256117 | Pre-XDR-TB | lineage2.2.1 | None | SRR21276959 | HR-TB | lineage2.2.1 | None | SRR29050932 | Sensitive | lineage2.2.1 | None | ERR10465793 | Sensitive | lineage3.1.1 | None | SRR18500604 | Sensitive | lineage2.2.1 | None | ERR13243713 | MDR-TB | lineage2.2.2 | None | SRR12420460 | MDR-TB | lineage2.2.2 | None | SRR25515557 | Sensitive | lineage2.2.1 | None | SRR29055616 | MDR-TB | lineage4.8.1 | None | ERR3063118 | RR-TB | lineage4.4.1.1 | None | ERR6866527 | HR-TB | lineage4.1.2.1 | None | ERR13291130 | Pre-XDR-TB | lineage2.2.1 | None | DRR188678 | Sensitive | lineage2.2.1 | None | SRR29055368 | MDR-TB | lineage4.8.1 | None | DRR130241 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277564 | Sensitive | lineage2.2.2 | None | ERR5866173 | MDR-TB | lineage2.2.1 | None | SRR30182307 | Other | lineage4 | None | SRR29538944 | Pre-XDR-TB | lineage2.2.1 | None | SRR6964482 | RR-TB | lineage3 | None | SRR6964510 | Pre-XDR-TB | lineage2.2.1 | None | SRR17716881 | Sensitive | lineage2.2.1 | None | SRR28393401 | MDR-TB | lineage4.3.4.2 | None | SRR29681329 | XDR-TB | lineage2.2.1 | None | SRR22137392 | Sensitive | lineage3 | None | ERR15686468 | Pre-XDR-TB | lineage4.5 | None | ERR4799244 | Pre-XDR-TB | lineage2.2.1 | in | DRR261044 | Sensitive | lineage2.1 | None | ERR553097 | MDR-TB | lineage2.2.1 | None | ERR4799272 | Pre-XDR-TB | lineage2.2.1 | in | ERR10610129 | RR-TB | lineage3 | None | ERR9807019 | Pre-XDR-TB | lineage2.2.1 | None | SRR15723125 | Pre-XDR-TB | lineage2.2.2 | None | ERR4822350 | Pre-XDR-TB | lineage2.2.1 | None | SRR671824 | Pre-XDR-TB | lineage2.2.2 | cn | SRR24256152 | Pre-XDR-TB | lineage2.2.1 | None | SRR671795 | MDR-TB | lineage2.2.1 | cn | ERR4808982 | Sensitive | lineage2.2.1 | za | SRR15723310 | HR-TB | lineage2.2.1 | None | DRR130109 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811331 | MDR-TB | lineage2.2.1 | cn | SRR16156699 | Pre-XDR-TB | lineage2.2.1 | None | ERR4812107 | Sensitive | lineage4.3.4.1 | None | SRR28393861 | HR-TB | lineage4.3.3;lineage4.8 | None | SRR25207252 | MDR-TB | lineage2.2.1 | None | SRR28339290 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866172 | MDR-TB | lineage2.2.1 | None | ERR4814013 | Sensitive | lineage4.1.1.1 | br | ERR5897107 | Pre-XDR-TB | lineage2.2.1 | None | ERR4832028 | MDR-TB | lineage2.2.1.1 | vn | ERR4828746 | Sensitive | lineage2.2.1 | vn | ERR4822515 | Sensitive | lineage3.1.1 | de | ERR7911471 | MDR-TB | lineage2.2.1 | vn | ERR5918112 | MDR-TB | lineage4.1.1.1 | za | ERR8975978 | MDR-TB | lineage4.1.1.1 | None | ERR1413470 | Sensitive | lineage4.6.2.2 | gb | ERR4818856 | Sensitive | lineage4.8 | gb | SRR6325451 | Sensitive | lineage4.8 | us | SRR8237301 | Other | lineage2.2.1 | np | ERR6879017 | MDR-TB | lineage4.1.2.1 | None | ERR13110315 | HR-TB | lineage4.1.1 | None | ERR1034715 | MDR-TB | lineage4.1.2.1 | pe | ERR3639799 | MDR-TB | lineage2.2.1 | None | SRR20969803 | HR-TB | lineage2.2.1 | None | SRR5073878 | Sensitive | lineage2.2.1 | vn | ERR11082886 | Sensitive | lineage3.1.1 | None | ERR11798627 | MDR-TB | lineage2.2.1 | None | SRR21691076 | Sensitive | lineage4 | None | SRR29016919 | MDR-TB | lineage2.2.1 | None |
|---|
