Rv3862c - p.Cys53Gly
Drug resistance types
63 Sensitive
4 RR-TB
14 HR-TB
48 MDR-TB
49 Pre-XDR-TB
1 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.1 | 4 |
| lineage2.2.1.1 | 6 |
| lineage2.2.1 | 125 |
| lineage4.3.4.1 | 3 |
| lineage4.3.2 | 2 |
| lineage4.1.2.1 | 5 |
| lineage3 | 5 |
| 1 | |
| lineage2.2.1;lineage1.2.2.2 | 1 |
| lineage4.8 | 6 |
| lineage2.2.2 | 8 |
| lineage4.2.2 | 1 |
| lineage4.1.4 | 1 |
| lineage1.1.2 | 2 |
| lineage2.1 | 2 |
| lineage3;lineage2.2.1.2;lineage2.2.1.1 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage3.1.1 | 3 |
| lineage4.5 | 3 |
| lineage4.3.3 | 1 |
| lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| lineage4.4.1.1 | 3 |
| lineage2.2 | 1 |
| lineage4.6.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 189 |
Geographic prevalence
Country level data for this variant is available for 51 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4814013 | Sensitive | lineage4.1.1.1 | br | ERR4832028 | MDR-TB | lineage2.2.1.1 | vn | ERR5918012 | Pre-XDR-TB | lineage2.2.1 | za | ERR8976106 | Sensitive | lineage2.2.1 | None | ERR4828743 | Sensitive | lineage2.2.1 | vn | ERR4828746 | Sensitive | lineage2.2.1 | vn | ERR2513460 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2515995 | MDR-TB | lineage4.1.1.1 | za | ERR4808982 | Sensitive | lineage2.2.1 | za | ERR4828360 | MDR-TB | lineage2.2.1 | vn | ERR4828411 | MDR-TB | lineage2.2.1 | vn | ERR5918112 | MDR-TB | lineage4.1.1.1 | za | ERR8975978 | MDR-TB | lineage4.1.1.1 | None | ERR7737663 | MDR-TB | lineage2.2.1 | None | ERR4812107 | Sensitive | lineage4.3.4.1 | None | ERR5866173 | MDR-TB | lineage2.2.1 | None | ERR5897107 | Pre-XDR-TB | lineage2.2.1 | None | ERR6866607 | Sensitive | lineage4.3.2 | None | ERR6879017 | MDR-TB | lineage4.1.2.1 | None | SRR22137392 | Sensitive | lineage3 | None | SRR22249839 | Sensitive | lineage2.2.1 | None | ERR5866172 | MDR-TB | lineage2.2.1 | None | ERR6866527 | HR-TB | lineage4.1.2.1 | None | ERR8976043 | HR-TB | None | SRR25534141 | Sensitive | lineage2.2.1 | None | SRR22251636 | Sensitive | lineage2.2.1 | None | ERR9030256 | MDR-TB | lineage2.2.1.1 | None | ERR9029390 | Sensitive | lineage2.2.1 | None | ERR9992831 | Pre-XDR-TB | lineage2.2.1 | None | ERR9634260 | MDR-TB | lineage2.2.1 | None | ERR9125625 | Sensitive | lineage2.2.1 | None | ERR9285788 | Sensitive | lineage2.2.1 | None | SRR10305982 | Pre-XDR-TB | lineage2.2.1 | None | SRR10305649 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992898 | XDR-TB | lineage2.2.1;lineage1.2.2.2 | None | ERR9993068 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232638 | Other | lineage4.8 | None | SRR10380008 | MDR-TB | lineage2.2.1 | None | SRR13232407 | MDR-TB | lineage2.2.1 | None | SRR14781850 | MDR-TB | lineage2.2.1 | None | SRR13591340 | Sensitive | lineage4.8 | None | SRR14519999 | MDR-TB | lineage4.3.4.1 | None | SRR15315883 | Sensitive | lineage2.2.2 | None | SRR15316055 | Other | lineage2.2.1 | None | SRR15723011 | Pre-XDR-TB | lineage2.2.2 | None | SRR15316249 | Sensitive | lineage2.2.2 | None | SRR15723024 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR15723125 | Pre-XDR-TB | lineage2.2.2 | None | SRR15723258 | HR-TB | lineage2.2.1 | None | SRR15723310 | HR-TB | lineage2.2.1 | None | SRR16058447 | Sensitive | lineage2.2.1 | None | SRR16156765 | Pre-XDR-TB | lineage2.2.1 | None | SRR16157044 | RR-TB | lineage2.2.1 | None | SRR17703717 | Sensitive | lineage2.2.1 | None | SRR17712092 | Sensitive | lineage2.2.1 | None | SRR17716880 | Sensitive | lineage2.2.1 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR18003026 | Sensitive | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR16156699 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156781 | MDR-TB | lineage2.2.1 | None | SRR16157052 | MDR-TB | lineage2.2.1 | None | SRR17688577 | Sensitive | lineage2.2.1 | None | SRR17703710 | Sensitive | lineage4.2.2 | None | SRR17716881 | Sensitive | lineage2.2.1 | None | SRR18665463 | Sensitive | lineage4.1.4 | None | SRR18500604 | Sensitive | lineage2.2.1 | None | SRR18511605 | Other | lineage2.2.1 | None | SRR20969359 | Pre-XDR-TB | lineage2.2.1 | None | SRR19295646 | MDR-TB | lineage1.1.2 | None | SRR21277564 | Sensitive | lineage2.2.2 | None | SRR20969803 | HR-TB | lineage2.2.1 | None | SRR24710160 | MDR-TB | lineage2.2.1 | None | DRR261166 | HR-TB | lineage2.1 | None | SRR25827558 | Pre-XDR-TB | lineage3;lineage2.2.1.2;lineage2.2.1.1 | None | DRR261044 | Sensitive | lineage2.1 | None | SRR21276959 | HR-TB | lineage2.2.1 | None | SRR21277378 | Sensitive | lineage2.2.1 | None | SRR20970002 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827306 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR25827382 | Pre-XDR-TB | lineage2.2.1 | None | SRR21279462 | Sensitive | lineage2.2.1 | None | SRR21277760 | Sensitive | lineage2.2.1 | None | SRR21277634 | Sensitive | lineage2.2.1 | None | SRR21277831 | HR-TB | lineage2.2.1 | None | SRR21675937 | Sensitive | lineage4.1.1 | None | SRR21576580 | Pre-XDR-TB | lineage2.2.1 | None | SRR21708942 | Sensitive | lineage2.2.1 | None | ERR11082886 | Sensitive | lineage3.1.1 | None | ERR11068632 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082589 | Sensitive | lineage4.5 | None | SRR23938594 | MDR-TB | lineage2.2.1 | None | SRR14519129 | Sensitive | lineage2.2.1.1 | None | ERR9806678 | RR-TB | lineage3 | None | ERR10610129 | RR-TB | lineage3 | None | ERR9807019 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256225 | MDR-TB | lineage4.3.3 | None | SRR24256152 | Pre-XDR-TB | lineage2.2.1 | None | SRR26399537 | Sensitive | lineage2.2.1 | None | SRR26937100 | MDR-TB | lineage2.2.1 | None | SRR24256117 | Pre-XDR-TB | lineage2.2.1 | None | SRR26558631 | HR-TB | lineage2.2.1 | None | SRR25515557 | Sensitive | lineage2.2.1 | None | SRR25514932 | Other | lineage2.2.1 | None | SRR27450380 | HR-TB | lineage2.2.1 | None | SRR26159044 | MDR-TB | lineage1.1.2 | None | SRR25207252 | MDR-TB | lineage2.2.1 | None | SRR25515446 | Pre-XDR-TB | lineage2.2.1 | None | SRR24083625 | Sensitive | lineage2.2.1 | None | SRR1723619 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN03246584 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1723552 | Pre-XDR-TB | lineage2.2.1 | cn | SRR671795 | MDR-TB | lineage2.2.1 | cn | ERR4814362 | Other | lineage4.8 | None | SRR6046278 | Sensitive | lineage4.9 | gb | SRR6824379 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824369 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6325451 | Sensitive | lineage4.8 | us | SRR6824407 | Pre-XDR-TB | lineage2.2.1 | cn | SRR671824 | Pre-XDR-TB | lineage2.2.2 | cn | ERR1034715 | MDR-TB | lineage4.1.2.1 | pe | SRR8237301 | Other | lineage2.2.1 | np | SRR1723824 | HR-TB | lineage2.2.1 | cn | SRR5073760 | Sensitive | lineage2.2.1 | vn | ERR2864278 | MDR-TB | lineage4.1.2.1 | pt | SRR5073878 | Sensitive | lineage2.2.1 | vn | ERR2510599 | MDR-TB | lineage4.8 | None | SRR5073910 | HR-TB | lineage4.4.2 | vn | SRR5074148 | Sensitive | lineage2.2.1 | vn | ERR3275874 | MDR-TB | lineage3 | nl | SRR5007183 | MDR-TB | lineage4.3.4.1 | None | SRR5074294 | Sensitive | lineage4.4.1.1 | None | SRR20969417 | Sensitive | lineage2.2 | None | SRR2101411 | Sensitive | lineage2.2.1 | None | ERR7911471 | MDR-TB | lineage2.2.1 | vn | SRR1710076 | Pre-XDR-TB | lineage2.2.2 | cn | SAMEA2535134 | MDR-TB | lineage2.2.1 | uz | ERR1413470 | Sensitive | lineage4.6.2.2 | gb | ERR4822515 | Sensitive | lineage3.1.1 | de | ERR4797917 | Pre-XDR-TB | lineage2.2.1 | in | SRR1710108 | MDR-TB | lineage2.2.1 | cn | ERR4827848 | Sensitive | lineage4.5 | None | ERR4822350 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797940 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4822358 | Pre-XDR-TB | lineage2.2.1 | None | ERR2843540 | MDR-TB | lineage2.2.1 | None | ERR2517014 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2843497 | MDR-TB | lineage2.2.1 | None | SRR6480541 | MDR-TB | lineage2.2.1 | None | ERR4799244 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796905 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799272 | Pre-XDR-TB | lineage2.2.1 | in | ERR4811100 | Sensitive | lineage2.2.1.1 | cn | ERR4797393 | Pre-XDR-TB | lineage2.2.1 | in | ERR4811331 | MDR-TB | lineage2.2.1 | cn | SRR6511609 | MDR-TB | lineage4.1.2.1 | None | ERR4800363 | Pre-XDR-TB | lineage2.2.1 | in | ERR4830984 | Pre-XDR-TB | lineage2.2.1 | np | ERR4799486 | Sensitive | lineage4.5 | in | SRR6896558 | Sensitive | lineage2.2.1 | None | ERR4832050 | MDR-TB | lineage2.2.1.1 | None | SRR6785539 | MDR-TB | lineage2.2.1 | None | ERR4800591 | Pre-XDR-TB | lineage2.2.1 | in | ERR4812245 | MDR-TB | lineage4.3.2 | pe | DRR473934 | HR-TB | lineage2.2.1 | None | SRR6964482 | RR-TB | lineage3 | None | SRR6964510 | Pre-XDR-TB | lineage2.2.1 | None | ERR3063118 | Sensitive | lineage4.4.1.1 | None | ERR3063111 | Sensitive | lineage4.4.1.1 | None | DRR473822 | Other | lineage2.2.1 | None | SRR7646001 | Pre-XDR-TB | lineage2.2.1 | None | SRR8217903 | Sensitive | lineage2.2.1 | None | DRR130241 | Pre-XDR-TB | lineage2.2.1 | None | DRR034493 | Sensitive | lineage2.2.1 | None | DRR130113 | Pre-XDR-TB | lineage2.2.1 | None | DRR130109 | Pre-XDR-TB | lineage2.2.1 | None | DRR188678 | Sensitive | lineage2.2.1 | None | ERR11798607 | MDR-TB | lineage2.2.1 | None | DRR188820 | Sensitive | lineage2.2.1 | None | DRR188807 | HR-TB | lineage2.2.1 | None | ERR4818856 | Sensitive | lineage4.8 | gb | ERR3794408 | MDR-TB | lineage2.2.1 | None | ERR10465793 | Sensitive | lineage3.1.1 | None | ERR10748148 | Pre-XDR-TB | lineage2.2.1 | None | ERR3273183 | MDR-TB | lineage2.2.1 | None | ERR11798627 | MDR-TB | lineage2.2.1 | None | ERR3639799 | MDR-TB | lineage2.2.1 | None | ERR3794538 | MDR-TB | lineage2.2.1 | None |
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