Rv3919c - c.87delC


Drug resistance types
0 Sensitive 2 RR-TB 37 HR-TB 64 MDR-TB 6 Pre-XDR-TB 5 XDR-TB 54 Other
lineage Counts
lineage Count
lineage4.1.1.1 7
lineage3.1.3 1
lineage4.2.1.1 12
lineage3.1 1
lineage4.8 10
lineage4.3.3 5
lineage2.2.1.1 1
lineage2.2.1 12
lineage3 38
lineage4.9 3
lineage4.6.2.2 6
lineage1.1.1.1 3
lineage4.1.1 2
lineage4.6.5 2
lineage1.2.2.2 10
lineage3.1.2 3
lineage1.1.2 8
lineage3.1.2.1 3
lineage2.2.1.2 1
lineage4.1.2 4
lineage1.2.1.2.1 4
lineage2.2.1;lineage4.8 1
lineage3.1.1 9
lineage2.2.1;lineage3 1
lineage4.2.2.2 3
lineage2.1 1
lineage1.2.2.2;lineage4.8 1
lineage4.1.2.1 4
lineage4.2.1.1;lineage4.3.3 1
lineage2.2.1;lineage3;lineage4 1
lineage1.2.2.1 2
lineage1.2.1.2 3
lineage5.1.4 1
lineage4.4.1.2 1
lineage2.2.1.2;lineage3.1.2.1 1
lineage3;lineage4 1
lineage7 1
spoligotype Counts
spoligotype Count
None 168
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR8758893 MDR-TB lineage4.1.1.1 None
SRR12882710 HR-TB lineage3.1.3 None
SRR23340031 Pre-XDR-TB lineage4.2.1.1 None
SRR24827293 MDR-TB lineage4.1.1.1 None
ERR4796534 HR-TB lineage3.1 in
SRR28239871 HR-TB lineage4.8 None
SRR21239920 Other lineage4.3.3 None
SRR5067338 Other lineage2.2.1.1 vn
ERR10680194 MDR-TB lineage4.8 None
ERR9119732 MDR-TB lineage2.2.1 None
ERR2512993 HR-TB lineage3 gb
SRR26936945 MDR-TB lineage2.2.1 None
SRR29231710 RR-TB lineage4.9 None
SRR23340066 MDR-TB lineage4.2.1.1 None
SRR23340030 Pre-XDR-TB lineage4.2.1.1 None
ERR13267670 Other lineage4.6.2.2 None
SRR29017273 HR-TB lineage1.1.1.1 None
ERR6866081 Other lineage4.1.1 None
ERR2514126 Other lineage4.6.5 gb
SRR23340038 XDR-TB lineage4.2.1.1 None
ERR13284443 MDR-TB lineage4.2.1.1 None
SRR1173584 Other lineage1.2.2.2 None
SRR28045534 Other lineage3.1.2 None
ERR4831521 HR-TB lineage1.1.2 pk
ERR5897105 HR-TB lineage3.1.2.1 None
ERR718324 Other lineage2.2.1.2 th
ERR11489007 MDR-TB lineage4.1.2 None
ERR4828339 HR-TB lineage1.1.1.1 vn
ERR8665966 MDR-TB lineage4.2.1.1 None
SRR26056461 HR-TB lineage1.2.2.2 None
SRR29289301 MDR-TB lineage1.1.2 None
ERR1023408 MDR-TB lineage3 None
SRR22251197 Other lineage3 None
ERR2512802 HR-TB lineage3 gb
SRR7068995 HR-TB lineage3 None
ERR4819427 HR-TB lineage1.2.1.2.1 gb
ERR3470621 Other lineage3 None
SRR14801488 Other lineage2.2.1;lineage4.8 None
SRR29052650 MDR-TB lineage4.1.1.1 None
ERR4816817 Other lineage3 gb
ERR4819960 Other lineage3 None
SRR18714798 HR-TB lineage4.8 None
SRR6045793 HR-TB lineage3.1.1 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR4814738 Other lineage3 gb
SRR6045177 HR-TB lineage3 gb
ERR9119494 MDR-TB lineage4.6.2.2 None
ERR4819827 Other lineage1.2.2.2 gb
SRR29231557 MDR-TB lineage4.1.2 None
SRR21240152 Other lineage4.3.3 None
ERR13290998 MDR-TB lineage2.2.1 None
ERR13266720 MDR-TB lineage3 None
SRR5341411 Pre-XDR-TB lineage3 None
ERR2516811 MDR-TB lineage4.2.1.1 gb
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR1163213 MDR-TB lineage3 None
SRR6339644 MDR-TB lineage3 au
SRR29093522 MDR-TB lineage2.2.1 None
ERR11080875 MDR-TB lineage4.2.1.1 None
ERR9030303 MDR-TB lineage1.1.2 None
SRR13583494 HR-TB lineage1.2.2.2 None
SRR18715207 HR-TB lineage4.8 None
ERR13266681 HR-TB lineage1.1.2 None
ERR5917752 MDR-TB lineage4.2.1.1 by
ERR5987263 MDR-TB lineage2.2.1 None
ERR4818168 Other lineage3 gb
SRR10500313 HR-TB lineage1.1.2 None
ERR8665965 MDR-TB lineage4.2.1.1 None
ERR3470683 Other lineage4.1.1.1 None
ERR11083004 MDR-TB lineage4.2.2.2 None
SRR11662503 MDR-TB lineage2.1 None
SRR10869315 MDR-TB lineage2.2.1 None
SRR21240105 Other lineage4.3.3 None
SRR21690133 Other lineage3 None
ERR13432060 MDR-TB lineage3.1.1 None
ERR11067724 Pre-XDR-TB lineage1.2.2.2;lineage4.8 None
ERR4829748 HR-TB lineage4.1.2.1 None
ERR4797454 Other lineage3.1.2 in
SRR6797778 MDR-TB lineage1.2.2.2 None
SRR28044702 XDR-TB lineage3 None
ERR2600415 HR-TB lineage4.1.2.1 None
SRR1163239 MDR-TB lineage3.1.1 None
SRR26936971 MDR-TB lineage2.2.1 None
SRR18715028 HR-TB lineage4.8 None
SRR3724669 Other lineage3 None
SRR1163108 MDR-TB lineage3.1.1 None
SRR16088012 HR-TB lineage4.8 None
SRR13232729 MDR-TB lineage4.2.1.1;lineage4.3.3 None
SRR29440810 Other lineage1.2.1.2.1 None
ERR2510357 MDR-TB lineage3 pk
SRR10147684 MDR-TB lineage3 None
ERR4799138 Other lineage1.2.2.2 in
DRR473958 Other lineage2.2.1 None
SRR5125075 MDR-TB lineage3 None
ERR4024776 Other lineage4.1.1 None
SRR23402849 MDR-TB lineage4.1.2.1 None
SAMN02414863 MDR-TB lineage3.1.1 se
SAMN02414924 MDR-TB lineage3 se
ERR2707068 RR-TB lineage4.9 cd
SRR25827749 XDR-TB lineage2.2.1;lineage3;lineage4 None
ERR10465988 Other lineage3 None
SRR23340068 MDR-TB lineage4.2.1.1 None
SRR12634606 Other lineage4.1.1.1 None
ERR137193 Other lineage3 ru
ERR9119532 MDR-TB lineage4.6.2.2 None
SRR10147699 MDR-TB lineage3 None
ERR4820589 Other lineage3 None
SRR28046244 HR-TB lineage3 None
SRR22424808 HR-TB lineage3.1.2.1 None
ERR4818342 Other lineage3 None
ERR4830779 MDR-TB lineage3 ir
ERR2707000 MDR-TB lineage4.1.2 cd
SRR8380925 HR-TB lineage1.2.2.1 in
SRR22249781 Other lineage1.2.1.2.1 None
ERR4830765 MDR-TB lineage3 ir
SRR28239958 HR-TB lineage4.8 None
SRR21239858 Other lineage4.3.3 None
ERR13290696 MDR-TB lineage1.2.1.2 None
ERR11049930 HR-TB lineage1.2.2.1 None
SAMN02599077 Other lineage1.2.2.2 in
SRR21239975 Other lineage4.3.3 None
SRR1163480 MDR-TB lineage3 None
SRR18715428 HR-TB lineage4.8 None
ERR4816579 Other lineage3 None
SRR29050693 HR-TB lineage1.2.2.2 None
ERR4810780 Other lineage2.2.1 None
SRR28045912 Other lineage1.1.2 None
SRR25340924 HR-TB lineage1.2.2.2 None
ERR2516567 MDR-TB lineage3.1.1 nl
ERR4815684 Other lineage5.1.4 gb
SRR7070618 Other lineage4.6.5 None
SRR14801735 Other lineage3 None
ERR13292170 MDR-TB lineage4.1.1.1 None
SRR1173093 Other lineage1.2.2.2 None
ERR6362636 MDR-TB lineage2.2.1 None
ERR13289828 HR-TB lineage3.1.1 None
ERR4872126 MDR-TB lineage4.6.2.2 None
SRR21689960 HR-TB lineage4.4.1.2 None
SRR25827433 Pre-XDR-TB lineage3.1.2.1 None
SRR13180354 MDR-TB lineage4.2.2.2 None
ERR11043668 Other lineage4.6.2.2 None
ERR13284373 MDR-TB lineage4.2.2.2 None
SRR29772523 MDR-TB lineage1.1.2 None
ERR11488980 MDR-TB lineage4.1.2 None
SRR25827439 XDR-TB lineage2.2.1.2;lineage3.1.2.1 None
ERR13291402 Other lineage1.2.1.2 None
ERR12554715 Other lineage4.9 None
ERR9030348 MDR-TB lineage1.1.2 None
SRR16089687 Other lineage1.2.1.2 None
SRR26112022 HR-TB lineage4.1.2.1 None
SRR18909922 MDR-TB lineage4.1.1.1 None
ERR9027241 MDR-TB lineage3.1.1 None
ERR4810728 Other lineage2.2.1 cn
ERR4816492 Other lineage3 None
ERR4818627 Other lineage3 None
SRR23340060 MDR-TB lineage4.2.1.1 None
ERR4800055 Other lineage3 in
SRR5073841 Other lineage1.1.1.1 vn
SRR14519700 Other lineage1.2.1.2.1 None
ERR2516594 MDR-TB lineage3.1.1 nl
SRR5341332 Pre-XDR-TB lineage3 None
ERR234695 Other lineage3;lineage4 ru
ERR038747 MDR-TB lineage4.8 ug
SRR29231440 HR-TB lineage3.1.2 None
ERR4872088 MDR-TB lineage4.6.2.2 None
SRR18714973 HR-TB lineage4.8 None
ERR13289911 HR-TB lineage3 None
ERR159959 Other lineage7 None