Rv3919c - c.87delC
Drug resistance types
0 Sensitive
1 RR-TB
22 HR-TB
40 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
42 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.2.2 | 5 |
| lineage1.1.2 | 4 |
| lineage3 | 29 |
| lineage4.8 | 7 |
| lineage4.1.1.1;lineage1.2.2.2 | 1 |
| lineage1.2.2.2 | 6 |
| lineage3.1 | 1 |
| lineage4.1.1 | 5 |
| lineage3.1.2 | 1 |
| lineage2.2.1 | 7 |
| lineage4.2.1.1 | 5 |
| lineage3.1.2.1 | 2 |
| lineage2.2.1.2 | 1 |
| lineage1.2.2.1 | 2 |
| lineage3.1.1 | 7 |
| lineage1.2.1.2.1 | 2 |
| lineage4.8;lineage2.2.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.3.3;lineage4.2.1.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.3.3 | 5 |
| lineage4.8;lineage1.2.2.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage5.1.4 | 1 |
| lineage1.1.1.1 | 2 |
| lineage4;lineage3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.6.5 | 1 |
| lineage1.2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 108 |
Geographic prevalence
Country level data for this variant is available for 37 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4872126 | MDR-TB | lineage4.6.2.2 | None | ERR4872088 | MDR-TB | lineage4.6.2.2 | None | ERR4831521 | HR-TB | lineage1.1.2 | pk | ERR11043668 | Other | lineage4.6.2.2 | None | ERR1023408 | MDR-TB | lineage3 | None | ERR10465988 | Other | lineage3 | None | ERR10680194 | MDR-TB | lineage4.8 | None | SRR6797541 | HR-TB | lineage4.1.1.1;lineage1.2.2.2 | None | SRR6797778 | MDR-TB | lineage1.2.2.2 | None | ERR038747 | MDR-TB | lineage4.8 | ug | ERR4796534 | HR-TB | lineage3.1 | in | ERR3470683 | Other | lineage4.1.1 | None | ERR4024776 | Other | lineage4.1.1 | None | ERR137193 | Other | lineage3 | ru | ERR3470621 | Other | lineage3 | None | ERR4799138 | Other | lineage1.2.2.2 | in | ERR4797454 | Other | lineage3.1.2 | in | ERR4810728 | Other | lineage2.2.1 | cn | ERR4800055 | Other | lineage3 | in | ERR4810780 | Other | lineage2.2.1 | None | ERR5917752 | MDR-TB | lineage4.2.1.1 | by | ERR5897105 | HR-TB | lineage3.1.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR718324 | Other | lineage2.2.1.2 | th | ERR6362636 | MDR-TB | lineage2.2.1 | None | ERR6866081 | Other | lineage4.1.1 | None | ERR11049930 | HR-TB | lineage1.2.2.1 | None | ERR8665966 | MDR-TB | lineage4.2.1.1 | None | ERR9027241 | MDR-TB | lineage3.1.1 | None | ERR8665965 | MDR-TB | lineage4.2.1.1 | None | ERR9030303 | MDR-TB | lineage1.1.2 | None | ERR9119732 | MDR-TB | lineage2.2.1 | None | ERR9030348 | MDR-TB | lineage1.1.2 | None | ERR9119494 | MDR-TB | lineage4.6.2.2 | None | ERR9119532 | MDR-TB | lineage4.6.2.2 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR1163480 | MDR-TB | lineage3 | None | SRR10500313 | HR-TB | lineage1.1.2 | None | SRR1163239 | MDR-TB | lineage3.1.1 | None | SRR10869315 | MDR-TB | lineage2.2.1 | None | SRR1163108 | MDR-TB | lineage3.1.1 | None | SRR1163213 | MDR-TB | lineage3 | None | SRR1173584 | Other | lineage1.2.2.2 | None | SRR1173093 | Other | lineage1.2.2.2 | None | SRR14801735 | Other | lineage3 | None | SRR12634606 | Other | lineage4.1.1 | None | SRR13583494 | HR-TB | lineage1.2.2.2 | None | SRR14519700 | Other | lineage1.2.1.2.1 | None | SRR14801488 | Other | lineage4.8;lineage2.2.1 | None | SRR12882710 | HR-TB | lineage3.1.3 | None | SRR13180354 | MDR-TB | lineage4.2.2.2 | None | SRR13232729 | MDR-TB | lineage4.3.3;lineage4.2.1.1 | None | SRR16089687 | Other | lineage1.2.1.2 | None | SRR18714973 | HR-TB | lineage4.8 | None | SRR18714798 | HR-TB | lineage4.8 | None | SRR18909922 | MDR-TB | lineage4.1.1 | None | SRR18715028 | HR-TB | lineage4.8 | None | SRR18715207 | HR-TB | lineage4.8 | None | SRR18715428 | HR-TB | lineage4.8 | None | SRR21239858 | Other | lineage4.3.3 | None | SRR21239975 | Other | lineage4.3.3 | None | SRR21239920 | Other | lineage4.3.3 | None | ERR11067724 | Pre-XDR-TB | lineage4.8;lineage1.2.2.2 | None | SRR21240105 | Other | lineage4.3.3 | None | SRR21240152 | Other | lineage4.3.3 | None | SRR22424808 | HR-TB | lineage3.1.2.1 | None | SAMN02414863 | MDR-TB | lineage3.1.1 | se | ERR11080875 | MDR-TB | lineage4.2.1.1 | None | SAMN02599077 | Other | lineage1.2.2.2 | in | ERR4814738 | Other | lineage3 | gb | ERR11083004 | MDR-TB | lineage4.2.2.2 | None | SRR23402849 | MDR-TB | lineage4.1.2.1 | None | ERR4815684 | Other | lineage5.1.4 | gb | SAMN02414924 | MDR-TB | lineage3 | se | ERR4816492 | Other | lineage3 | None | ERR4816579 | Other | lineage3 | None | SRR8380925 | HR-TB | lineage1.2.2.1 | in | ERR2512993 | HR-TB | lineage3 | gb | ERR4816817 | Other | lineage3 | gb | SRR5073841 | Other | lineage1.1.1.1 | vn | ERR234695 | Other | lineage4;lineage3 | ru | ERR4818792 | Other | lineage3 | None | ERR4818168 | Other | lineage3 | gb | ERR4818342 | Other | lineage3 | None | SRR5067338 | Other | lineage2.2.1.1 | vn | ERR4818627 | Other | lineage3 | None | ERR2510357 | MDR-TB | lineage3 | pk | ERR2512802 | HR-TB | lineage3 | gb | SRR5125075 | MDR-TB | lineage3 | None | ERR2514126 | Other | lineage4.6.5 | gb | SRR5341411 | Pre-XDR-TB | lineage3 | None | ERR4819827 | Other | lineage1.2.2 | gb | ERR2516567 | MDR-TB | lineage3.1.1 | nl | ERR4819427 | HR-TB | lineage1.2.1.2.1 | gb | ERR2516594 | MDR-TB | lineage3.1.1 | nl | SRR5341332 | Pre-XDR-TB | lineage3 | None | ERR4819960 | Other | lineage3 | None | ERR4820589 | Other | lineage3 | None | SRR6045793 | HR-TB | lineage3.1.1 | None | ERR2707000 | MDR-TB | lineage4.1.2 | cd | ERR2707068 | RR-TB | lineage4.9 | cd | ERR2516811 | MDR-TB | lineage4.2.1.1 | gb | ERR4829748 | HR-TB | lineage4.1.2.1 | None | SRR6045177 | HR-TB | lineage3 | gb | ERR4828339 | HR-TB | lineage1.1.1.1 | vn | ERR4830765 | MDR-TB | lineage3 | ir | SRR6339644 | MDR-TB | lineage3 | au | ERR4830779 | MDR-TB | lineage3 | ir |
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