lineage | Count |
---|---|
7 | |
lineage4.3.3 | 3 |
lineage2 | 1 |
lineage1.1.3.1 | 1 |
lineage3.1.2.1 | 1 |
lineage1.2.2.2 | 1 |
lineage3.1 | 1 |
lineage4.3.2.1 | 12 |
lineage4.3.2 | 1 |
lineage4.5 | 3 |
lineage1.1.1 | 2 |
lineage1.2.1.2.1 | 1 |
lineage1.2.1.2 | 1 |
lineage4.1.2.1 | 11 |
lineage1.1.2 | 4 |
lineage4.8 | 1 |
lineage4.2.2.2 | 1 |
lineage3 | 1 |
lineage4.1.1 | 2 |
spoligotype | Count |
---|---|
None | 55 |
ID | Drug resistance | Lineage | Country iso2 | ERR4553582 | MDR-TB | None | ERR4024765 | Sensitive | lineage4.3.3 | None | ERR4553577 | Pre-XDR-TB | None | ERR4553505 | MDR-TB | None | ERR4553789 | Pre-XDR-TB | None | ERR4553882 | Pre-XDR-TB | None | ERR4553792 | MDR-TB | None | ERR5863941 | Pre-XDR-TB | lineage2 | None | ERR4553924 | HR-TB | None | ERR4553954 | MDR-TB | lineage1.1.3.1 | None | ERR4799553 | HR-TB | lineage3.1.2.1 | None | ERR4800631 | Sensitive | lineage1.2.2.2 | None | ERR4798180 | Sensitive | lineage3.1 | in | ERR9992885 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR6865626 | Sensitive | lineage4.3.3 | None | ERR9992636 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR1184355 | MDR-TB | lineage4.3.2.1 | None | SRR1173001 | MDR-TB | lineage4.3.2.1 | None | SRR1173210 | MDR-TB | lineage4.3.2 | None | SRR1173516 | MDR-TB | lineage4.3.2.1 | None | SRR1175091 | MDR-TB | lineage4.3.2.1 | None | SRR1184361 | MDR-TB | lineage4.3.2.1 | None | ERR9993039 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR1196540 | MDR-TB | lineage4.3.2.1 | None | SRR1196572 | MDR-TB | lineage4.3.2.1 | None | SRR21887751 | MDR-TB | lineage4.5 | None | SRR11972209 | MDR-TB | lineage1.1.1 | None | SRR12931698 | Sensitive | lineage4.3.3 | None | SRR12006611 | HR-TB | lineage1.2.1.2.1 | None | SRR12882106 | Sensitive | lineage1.2.1.2 | None | SRR21727768 | Sensitive | lineage4.1.2.1 | None | ERR11082310 | MDR-TB | lineage4.1.2.1 | None | ERR2041757 | MDR-TB | lineage4.1.2.1 | rs | SAMN02586021 | MDR-TB | lineage4.3.2.1 | za | ERR2041750 | MDR-TB | lineage4.1.2.1 | rs | ERR1465793 | MDR-TB | lineage4.1.2.1 | None | SRR7898227 | Pre-XDR-TB | lineage1.1.2 | in | ERR2179733 | MDR-TB | lineage4.5 | cn | SRR5074057 | HR-TB | lineage1.1.1 | vn | SAMEA3715558 | MDR-TB | lineage4.1.2.1 | rs | ERR4831489 | Pre-XDR-TB | lineage4.5 | None | ERR4829042 | Pre-XDR-TB | lineage4.1.2.1 | it | ERR4828866 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11049762 | Sensitive | lineage1.1.2 | None | SRR6046739 | Other | lineage1.1.2 | None | ERR4828821 | Pre-XDR-TB | lineage4.1.2.1 | None | SAMN02585986 | MDR-TB | lineage4.3.2.1 | za | SRR6797812 | MDR-TB | lineage4.8 | None | ERR4831501 | Pre-XDR-TB | lineage4.2.2.2 | pk | SRR6797626 | MDR-TB | lineage3 | None | ERR1367634 | MDR-TB | lineage4.1.2.1 | None | ERR1394280 | Pre-XDR-TB | lineage1.1.2 | None | SRR7781501 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR046825 | RR-TB | lineage4.1.1 | gb | ERR046943 | RR-TB | lineage4.1.1 | gb |
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