EBG00000313325 - n.419T>C


Drug resistance types
10 Sensitive 4 RR-TB 57 HR-TB 39 MDR-TB 33 Pre-XDR-TB 0 XDR-TB 6 Other
lineage Counts
lineage Count
lineage4.4.1.1 8
lineage4.1.2.1 1
lineage2.2.2 19
lineage4.6.1 10
lineage4.7 1
lineage4.6.1.1 3
11
lineage2.2.1 29
lineage4.6.1.2 5
lineage2.2.2;lineage2.2.1 2
lineage4.9 10
lineage3 4
lineage4.5 3
lineage2.2.1.1 2
lineage2.2 23
lineage4.3.3 1
lineage4 4
lineage4;lineage2.2.2 1
lineage4.4.2 2
lineage4.9;lineage2 1
lineage4.3.4.2.1 3
lineage4.8.1 2
lineage1.1.2 1
lineage4.4 1
lineage4.6.1;lineage3.1.1 1
lineage4.6.1;lineage3.1 1
spoligotype Counts
spoligotype Count
None 149
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SAMN02381009 MDR-TB lineage4.4.1.1 None
SRR19303792 Sensitive lineage4.1.2.1 None
SAMN02360583 HR-TB lineage2.2.2 None
SAMN02381037 MDR-TB lineage4.6.1 None
ERR4815506 Sensitive lineage4.7 gb
SAMN02381005 Other lineage4.6.1.1 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
ERR192070 Other None
SAMN02360581 HR-TB lineage2.2.1 None
SAMN02360586 HR-TB lineage2.2.1 None
SAMN02381051 RR-TB lineage4.6.1.2 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SAMN02360571 HR-TB lineage2.2.2;lineage2.2.1 None
SAMN02360590 MDR-TB lineage2.2.2 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SAMN02360574 HR-TB lineage2.2.1 None
SAMN02398710 MDR-TB lineage2.2.2 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
SAMN02360580 HR-TB lineage2.2.1 None
ERR4820197 Sensitive lineage4.9 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
SAMN02360577 HR-TB lineage3 None
SAMN02381012 MDR-TB lineage4.4.1.1 None
SAMN02360585 HR-TB lineage4.5 None
SAMN02360579 HR-TB lineage2.2.1.1 None
SAMN02381047 Sensitive lineage4.6.1 None
SRR6046395 HR-TB lineage4.9 None
SRR1013553 Pre-XDR-TB lineage2.2 None
ERR4798573 MDR-TB lineage4.3.3 in
ERR473279 Other lineage4.9 None
SRR1013554 Pre-XDR-TB lineage2.2 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
SRR1013581 Pre-XDR-TB lineage2.2 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SRR1013577 MDR-TB lineage2.2 None
SRR1013583 HR-TB lineage2.2 None
SRR1013568 Pre-XDR-TB lineage2.2 None
SRR1013578 MDR-TB lineage2.2 None
SRR1013589 HR-TB lineage2.2.1 None
SRR1013584 HR-TB lineage2.2 None
SRR1013582 Pre-XDR-TB lineage2.2.1 None
SRR1013595 HR-TB lineage3 None
SRR1013590 HR-TB lineage2.2.1 None
SRR1013598 HR-TB None
SRR1013597 HR-TB lineage2.2 None
SRR1013596 HR-TB lineage3 None
SRR1013601 HR-TB lineage2.2.1 None
SRR1013599 HR-TB None
SRR1013600 HR-TB lineage2.2.1.1 None
SRR1013604 HR-TB lineage2.2.1 None
SRR1013603 HR-TB lineage2.2.1 None
SRR1013607 HR-TB lineage2.2 None
SRR1013608 HR-TB lineage2.2 None
SRR1013613 HR-TB lineage2.2.1 None
SRR1013602 HR-TB lineage2.2.1 None
SRR1013609 HR-TB lineage4 None
SRR1013610 HR-TB lineage4 None
SRR1013612 HR-TB lineage4 None
SRR1013611 HR-TB lineage4 None
SRR1013614 HR-TB lineage2.2 None
SRR1013621 Pre-XDR-TB lineage2.2 None
SRR1013617 MDR-TB None
SRR1013618 MDR-TB None
SRR1013633 MDR-TB lineage2.2 None
SRR1013629 Pre-XDR-TB lineage2.2 None
SRR1013622 Pre-XDR-TB lineage2.2 None
SRR1013630 Pre-XDR-TB lineage2.2 None
SRR1013634 MDR-TB lineage2.2 None
SRR1048853 Pre-XDR-TB lineage4;lineage2.2.2 None
SRR1047993 HR-TB lineage2.2.1 None
SRR1048852 Pre-XDR-TB lineage4.9 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR1048866 Pre-XDR-TB lineage4.4.2 None
SRR1048865 Pre-XDR-TB lineage4.4.2 None
SRR1048867 Pre-XDR-TB lineage2.2.2 None
SRR1048869 Pre-XDR-TB lineage2.2.2 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
SRR1048886 MDR-TB lineage2.2 None
SRR1048870 Pre-XDR-TB lineage2.2 None
SRR1048885 MDR-TB None
SRR1048966 Pre-XDR-TB lineage2.2.1 None
SRR1048969 MDR-TB lineage2.2.2 None
SRR1048968 HR-TB lineage2.2.2;lineage2.2.1 None
SRR1048965 Pre-XDR-TB lineage2.2.1 None
SRR1048975 HR-TB lineage2.2.1 None
SRR1048982 HR-TB None
SRR1048974 HR-TB lineage2.2.1 None
SRR1048980 HR-TB lineage3 None
SRR1048985 HR-TB lineage2.2.1 None
SRR1048983 HR-TB None
SRR1048986 HR-TB lineage2.2.1 None
SRR1048988 HR-TB lineage2.2 None
SRR1048991 HR-TB lineage2.2.2 None
SRR1048995 HR-TB lineage4.5 None
SRR1048992 HR-TB lineage2.2.2 None
SRR1048994 HR-TB lineage4.9 None
SRR1048987 HR-TB lineage2.2.1 None
SRR1048993 HR-TB lineage4.9 None
SRR1048997 HR-TB lineage2.2.1 None
SRR1048996 HR-TB lineage4.5 None
SRR1049004 MDR-TB lineage2.2.2 None
SRR1048998 HR-TB lineage2.2.1 None
SRR1049022 HR-TB lineage4.9;lineage2 None
SRR1049006 MDR-TB lineage2.2.2 None
SRR1049005 MDR-TB lineage2.2.2 None
SRR1049007 Pre-XDR-TB lineage2.2.2 None
SRR1049623 MDR-TB lineage4.4.1.1 None
SRR1049026 Pre-XDR-TB None
SRR1049040 MDR-TB lineage2.2.1 None
SRR1049023 HR-TB lineage2.2 None
SRR1049027 Pre-XDR-TB None
SRR1049041 MDR-TB None
SRR1049622 MDR-TB lineage4.4.1.1 None
SRR1049751 RR-TB lineage4.6.1.2 None
SRR1049629 MDR-TB lineage4.4.1.1 None
SRR1049723 MDR-TB lineage4.6.1 None
SRR1049743 Sensitive lineage4.6.1 None
SRR1049744 Sensitive lineage4.6.1 None
SRR1049630 MDR-TB lineage4.4.1.1 None
SRR1049724 MDR-TB lineage4.6.1 None
SRR1062902 MDR-TB lineage4.4.1.1 None
SRR1049752 RR-TB lineage4.6.1.2 None
SRR1062895 Other lineage4.6.1.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1062933 Sensitive lineage4.9 None
SRR1062898 MDR-TB lineage4.3.4.2.1 None
SRR1062927 MDR-TB lineage4.6.1 None
SRR1062941 MDR-TB lineage4.6.1.2 None
SRR1062937 HR-TB lineage4.6.1 None
SRR1140627 Other lineage4.6.1 None
SRR11342675 Pre-XDR-TB lineage4.8.1 None
SRR1140586 HR-TB lineage4.9 None
SRR11349134 Pre-XDR-TB lineage4.8.1 None
SRR1140677 MDR-TB lineage4.6.1 None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1140751 MDR-TB lineage4.4.1.1 None
SRR1140723 Sensitive lineage4.6.1.1 None
SRR1140740 RR-TB lineage4.6.1.2 None
SRR1144744 HR-TB lineage2.2.1 None
SRR1144809 HR-TB lineage2.2.1 None
SRR1144759 MDR-TB lineage2.2 None
SRR1173335 Sensitive lineage4.9 None
SRR1172300 Sensitive lineage1.1.2 None
SRR1172713 MDR-TB lineage4.4 None
SRR1173293 MDR-TB lineage4.6.1;lineage3.1.1 None
SRR1173416 Other lineage4.9 None
SRR1173832 MDR-TB lineage4.6.1;lineage3.1 None