EBG00000313339 - n.1875A>T
Drug resistance types
3 Sensitive
13 RR-TB
7 HR-TB
3 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
52 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 10 |
| lineage4.4.2 | 1 |
| lineage4.9 | 3 |
| lineage1.1.3.1 | 3 |
| lineage4.1.1 | 1 |
| lineage4.3.3 | 6 |
| lineage2.2.1.1 | 2 |
| lineage4.6.5 | 1 |
| lineage3 | 9 |
| lineage2.2.1 | 4 |
| lineage4.1 | 1 |
| lineage4.1.2.1 | 13 |
| lineage5 | 2 |
| lineage4.2.1 | 1 |
| lineage4 | 3 |
| lineage4.1.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.6.2.2 | 5 |
| lineage4.1.1.3 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.1.2 | 2 |
| lineage3.1.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage3.1.2 | 1 |
| 1 | |
| lineage4.3.4 | 1 |
| lineage4.9;lineage1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 80 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR22048374 | Sensitive | lineage4.8 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4815777 | Other | lineage4.9 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814709 | Other | lineage4.1.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4815467 | Other | lineage3 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816968 | Other | lineage4.2.1 | gb | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4816232 | Other | lineage4 | None | ERR4816464 | Other | lineage3 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4818655 | Other | lineage4.3.3 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4818691 | Other | lineage4.8 | None | ERR4817874 | Other | lineage3 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4818752 | Other | lineage3 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818465 | Other | lineage3 | gb | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR4819166 | Other | lineage3 | gb | ERR4817584 | MDR-TB | lineage3 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819570 | Sensitive | lineage4.1.1.3 | gb | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4820324 | Other | lineage4 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4821812 | Other | lineage4.8 | gb | ERR4820188 | Other | lineage3 | gb | ERR4821791 | HR-TB | lineage4.1.2.1 | None | ERR4821028 | Sensitive | lineage3.1.1 | None | ERR4821360 | Other | lineage4.1.2.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821214 | RR-TB | None | ERR4821310 | Other | lineage5 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4822167 | Other | lineage4.6.2.2 | None | ERR4821563 | HR-TB | lineage1.1.2 | gb | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4829337 | Other | lineage4.8 | None | ERR4821761 | Other | lineage3 | gb | SRR6045267 | RR-TB | lineage4 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None |
|---|
