lineage | Count |
---|---|
lineage2.2.1 | 10 |
lineage2.2.2 | 1 |
lineage4.8 | 2 |
lineage4.8;lineage4.2.1.1 | 1 |
lineage4.3.3 | 2 |
lineage4 | 2 |
lineage4.1 | 1 |
lineage4.1.2.1 | 4 |
lineage4.7 | 1 |
lineage4.3.4.1 | 1 |
lineage4.9 | 7 |
lineage3.1.1 | 1 |
lineage3 | 2 |
lineage1.1.2 | 1 |
lineage4.1.2 | 1 |
lineage4.3 | 1 |
lineage4.6.5 | 1 |
lineage4.3.4.2 | 1 |
lineage3.1.2 | 1 |
spoligotype | Count |
---|---|
None | 41 |
ID | Drug resistance | Lineage | Country iso2 | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR19303815 | Other | lineage4.8 | None | SRR19303805 | Other | lineage4.8 | None | SRR21277550 | Sensitive | lineage2.2.1 | None | ERR2027252 | Other | lineage4.8;lineage4.2.1.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR1950088 | Sensitive | lineage4 | None | ERR4815502 | Other | lineage4.1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR6046246 | Other | lineage3 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR6046534 | Other | lineage1.1.2 | None | ERR4799012 | Pre-XDR-TB | lineage2.2.1 | in | SRR6046815 | Other | lineage3 | None | SRR7131216 | Other | lineage4.1.2.1 | None | ERR10796599 | Other | lineage4 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR8158016 | Sensitive | lineage2.2.1 | None | SRR12931784 | Sensitive | lineage4.3.4.2 | None | SRR14088378 | Pre-XDR-TB | lineage3.1.2 | None |
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