EBG00000313339 - n.2798C>T
Drug resistance types
118 Sensitive
0 RR-TB
0 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
152 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 267 |
| lineage4.2.1.1 | 1 |
| lineage2.2.1 | 2 |
| La2 | 1 |
| lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 272 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180623 | Sensitive | lineage4.9 | None | SRR1208875 | Sensitive | lineage4.9 | None | SRR1180138 | Sensitive | lineage4.9 | None | SRR1182960 | Sensitive | lineage4.9 | None | SRR1180020 | Other | lineage4.9 | None | SRR1183529 | Other | lineage4.9 | None | SRR1182929 | Other | lineage4.9 | None | SRR1183383 | Other | lineage4.9 | None | SRR1183684 | Other | lineage4.9 | None | SRR1181269 | Other | lineage4.9 | None | SRR1181397 | Sensitive | lineage4.9 | None | SRR1183325 | Other | lineage4.9 | None | SRR1181194 | Sensitive | lineage4.9 | None | SRR1183606 | Sensitive | lineage4.9 | None | SRR1183234 | Other | lineage4.9 | None | SRR1183617 | Other | lineage4.9 | None | SRR1180474 | Sensitive | lineage4.9 | None | SRR1181574 | Sensitive | lineage4.9 | None | SRR1183309 | Other | lineage4.9 | None | SRR1208758 | Other | lineage4.9 | None | SRR1183531 | Other | lineage4.9 | None | SRR1180787 | Other | lineage4.9 | None | SRR1183603 | Other | lineage4.9 | None | SRR1183173 | Sensitive | lineage4.9 | None | SRR1180735 | Other | lineage4.9 | None | SRR1183226 | Other | lineage4.9 | None | SRR1183244 | Other | lineage4.9 | None | SRR1181144 | Sensitive | lineage4.9 | None | SRR1180815 | Other | lineage4.9 | None | SRR1183181 | Sensitive | lineage4.9 | None | SRR1183207 | Sensitive | lineage4.9 | None | SRR1180204 | Other | lineage4.9 | None | SRR1180080 | Other | lineage4.9 | None | SRR1208405 | Sensitive | lineage4.9 | None | SRR1181496 | Other | lineage4.9 | None | SRR1208369 | Other | lineage4.9 | None | SRR1182922 | Sensitive | lineage4.9 | None | SRR1180646 | Sensitive | lineage4.9 | None | SRR1182911 | Sensitive | lineage4.9 | None | SRR1183036 | Sensitive | lineage4.9 | None | SRR1183543 | Sensitive | lineage4.9 | None | SRR1181299 | Other | lineage4.9 | None | SRR1183202 | Sensitive | lineage4.9 | None | SRR1180019 | Other | lineage4.9 | None | SRR1183279 | Sensitive | lineage4.9 | None | SRR1183287 | Other | lineage4.9 | None | SRR1183601 | Other | lineage4.9 | None | SRR1183682 | Other | lineage4.9 | None | SRR1183126 | Other | lineage4.9 | None | SRR1180024 | Other | lineage4.9 | None | SRR1183681 | Other | lineage4.9 | None | SRR1183686 | Sensitive | lineage4.9 | None | SRR1182921 | Other | lineage4.9 | None | SRR1181372 | Other | lineage4.9 | None | SRR1183437 | Other | lineage4.9 | None | SRR1183698 | Other | lineage4.9 | None | SRR1180692 | Sensitive | lineage4.9 | None | SRR1202578 | Sensitive | lineage4.9 | None | SRR1180796 | Sensitive | lineage4.9 | None | SRR1181287 | Sensitive | lineage4.9 | None | SRR1181591 | Sensitive | lineage4.9 | None | SRR1183687 | Other | lineage4.9 | None | SRR1180066 | Sensitive | lineage4.9 | None | SRR1180745 | Other | lineage4.9 | None | SRR1180758 | Sensitive | lineage4.9 | None | SRR1181509 | Other | lineage4.9 | None | SRR1183479 | Other | lineage4.9 | None | SRR1208398 | Sensitive | lineage4.9 | None | SRR1181482 | Sensitive | lineage4.9 | None | SRR1182904 | Sensitive | lineage4.9 | None | SRR1183318 | Sensitive | lineage4.9 | None | SRR1183438 | Other | lineage4.9 | None | SRR1183031 | Other | lineage4.9 | None | SRR1183164 | Other | lineage4.9 | None | SRR1183239 | Other | lineage4.9 | None | SRR1180610 | Sensitive | lineage4.9 | None | SRR1180074 | Sensitive | lineage4.9 | None | SRR1181286 | Other | lineage4.9 | None | SRR1181490 | Other | lineage4.9 | None | SRR1180209 | Other | lineage4.9 | None | SRR1181191 | Other | lineage4.9 | None | SRR1182901 | Other | lineage4.9 | None | SRR1183241 | Other | lineage4.9 | None | SRR1183458 | Sensitive | lineage4.9 | None | SRR1183494 | Sensitive | lineage4.9 | None | SRR1183679 | Other | lineage4.9 | None | SRR1180486 | Other | lineage4.9 | None | SRR1183243 | Sensitive | lineage4.9 | None | SRR1183692 | Sensitive | lineage4.9 | None | SRR1180493 | Sensitive | lineage4.9 | None | SRR1180583 | Other | lineage4.9 | None | SRR1183109 | Other | lineage4.9 | None | SRR1183414 | Other | lineage4.9 | None | SRR1183717 | Other | lineage4.9 | None | SRR1183369 | Other | lineage4.9 | None | SRR1180239 | Other | lineage4.9 | None | SRR1209037 | Sensitive | lineage4.9 | None | SRR1181589 | Other | lineage4.9 | None | SRR1180724 | Other | lineage4.9 | None | SRR1181291 | Sensitive | lineage4.9 | None | SRR1183668 | Sensitive | lineage4.9 | None | SRR1202388 | Sensitive | lineage4.9 | None | SRR1202603 | Sensitive | lineage4.9 | None | SRR1202721 | Sensitive | lineage4.9 | None | SRR1208237 | Sensitive | lineage4.9 | None | SRR1181488 | Sensitive | lineage4.9 | None | SRR1208921 | Other | lineage4.9 | None | SRR1181398 | Other | lineage4.9 | None | SRR1180083 | Sensitive | lineage4.9 | None | SRR1181593 | Other | lineage4.9 | None | SRR1183549 | Other | lineage4.9 | None | SRR1180032 | Other | lineage4.9 | None | SRR1180597 | Other | lineage4.9 | None | SRR1180114 | Other | lineage4.9 | None | SRR1183195 | Sensitive | lineage4.9 | None | SRR1183672 | Sensitive | lineage4.9 | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR1183305 | Other | lineage4.9 | None | SRR1180174 | Other | lineage4.9 | None | SRR1183400 | Sensitive | lineage4.9 | None | SRR1180737 | Other | lineage4.9 | None | SRR1180613 | Other | lineage4.9 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1183122 | Other | lineage4.9 | None | SRR1183023 | Sensitive | lineage4.9 | None | SRR1180764 | Sensitive | lineage4.9 | None | SRR1208969 | Sensitive | lineage4.9 | None | SRR1182888 | Sensitive | lineage4.9 | None | SRR1182963 | Sensitive | lineage4.9 | None | SRR1208455 | Sensitive | lineage4.9 | None | SRR1180113 | Other | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1181499 | Other | lineage4.9 | None | SRR1183421 | Sensitive | lineage4.9 | None | SRR1183710 | Other | lineage4.9 | None | SRR1208626 | Sensitive | lineage4.9 | None | SRR1182900 | Sensitive | lineage4.9 | None | SRR1181595 | Other | lineage4.9 | None | SRR1180153 | Other | lineage4.9 | None | SRR1202380 | Sensitive | lineage4.9 | None | SRR1180807 | Sensitive | lineage4.9 | None | SRR1183704 | Other | lineage4.9 | None | SRR1183092 | Other | lineage4.9 | None | SRR1183602 | Other | lineage4.9 | None | SRR1183153 | Other | lineage4.9 | None | SRR1183403 | Other | lineage4.9 | None | SRR1180554 | Sensitive | lineage4.9 | None | SRR1181184 | Sensitive | lineage4.9 | None | SRR1180632 | Other | lineage4.9 | None | SRR1180459 | Other | lineage4.9 | None | SRR1183270 | Other | lineage4.9 | None | SRR1181505 | Sensitive | lineage4.9 | None | SRR1181569 | Other | lineage4.9 | None | SRR1181580 | Other | lineage4.9 | None | SRR1183086 | Other | lineage4.9 | None | SRR1181360 | Sensitive | lineage4.9 | None | SRR1181592 | Other | lineage4.9 | None | SRR1183091 | Other | lineage4.9 | None | SRR1180520 | Other | lineage4.9 | None | SRR1183093 | Other | lineage4.9 | None | SRR1181275 | Sensitive | lineage4.9 | None | SRR1183719 | Sensitive | lineage4.9 | None | SRR1180131 | Sensitive | lineage4.9 | None | SRR1180589 | Other | lineage4.9 | None | SRR1208460 | Other | lineage4.9 | None | SRR1181386 | Other | lineage4.9 | None | SRR1208797 | Sensitive | lineage4.9 | None | SRR1181228 | Sensitive | lineage4.9 | None | SRR1183333 | Other | lineage4.9 | None | SRR1208463 | Sensitive | lineage4.9 | None | SRR1180831 | Other | lineage4.9 | None | SRR1181244 | Other | lineage4.9 | None | SRR1181577 | Other | lineage4.9 | None | SRR1182893 | Other | lineage4.9 | None | SRR1182889 | Other | lineage4.9 | None | SRR1180018 | Sensitive | lineage4.9 | None | SRR1180588 | Other | lineage4.9 | None | SRR1183328 | Sensitive | lineage4.9 | None | SRR1183604 | Sensitive | lineage4.9 | None | SRR1202572 | Sensitive | lineage4.9 | None | SRR1209029 | Sensitive | lineage4.9 | None | SRR1180164 | Other | lineage4.9 | None | SRR1180705 | Other | lineage4.9 | None | SRR1180503 | Other | lineage4.9 | None | SRR1181542 | Other | lineage4.9 | None | SRR1183432 | Other | lineage4.9 | None | SRR1208278 | Sensitive | lineage4.9 | None | SRR1208800 | Sensitive | lineage4.9 | None | SRR1183096 | Sensitive | lineage4.9 | None | SRR1183238 | Other | lineage4.9 | None | SRR1183389 | Sensitive | lineage4.9 | None | SRR1208477 | Sensitive | lineage4.9 | None | SRR1183394 | Other | lineage4.9 | None | SRR1180518 | Other | lineage4.9 | None | SRR1180197 | Other | lineage4.9 | None | SRR1208693 | Sensitive | lineage4.9 | None | SRR1183210 | Sensitive | lineage4.9 | None | SRR1180524 | Other | lineage4.9 | None | SRR1180538 | Sensitive | lineage4.9 | None | SRR1182958 | Other | lineage4.9 | None | SRR1180031 | Other | lineage4.9 | None | SRR1180578 | Other | lineage4.9 | None | SRR1183113 | Sensitive | lineage4.9 | None | SRR1180543 | Sensitive | lineage4.9 | None | SRR1183213 | Other | lineage4.9 | None | SRR1180126 | Sensitive | lineage4.9 | None | SRR1183419 | Sensitive | lineage4.9 | None | SRR1180017 | Other | lineage4.9 | None | SRR1183677 | Sensitive | lineage4.9 | None | SRR1183702 | Other | lineage4.9 | None | SRR1183364 | Other | lineage4.9 | None | SRR1183417 | Sensitive | lineage4.9 | None | SRR1180235 | Other | lineage4.9 | None | SRR1180714 | Sensitive | lineage4.9 | None | SRR1181573 | Other | lineage4.9 | None | SRR1183456 | Other | lineage4.9 | None | SRR1183688 | Sensitive | lineage4.9 | None | SRR1208615 | Other | lineage4.9 | None | SRR1208917 | Sensitive | lineage4.9 | None | SRR1183404 | Other | lineage4.9 | None | SRR1180686 | Other | lineage4.9 | None | SRR1180723 | Other | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR1208659 | Other | lineage4.9 | None | ERR4457908 | Sensitive | lineage4.1.2.1 | None | SRR1183137 | Other | lineage4.9 | None | SRR1180041 | Sensitive | lineage4.9 | None | SRR1181323 | Sensitive | lineage4.9 | None | SRR1182882 | Other | lineage4.9 | None | SRR1208313 | Other | lineage4.9 | None | SRR1209032 | Sensitive | lineage4.9 | None | SRR1182917 | Other | lineage4.9 | None | SRR1183075 | Sensitive | lineage4.9 | None | SRR1180731 | Other | lineage4.9 | None | SRR1183285 | Other | lineage4.9 | None | SRR1182966 | Sensitive | lineage4.9 | None | SRR1208515 | Sensitive | lineage4.9 | None | SRR1202605 | Sensitive | lineage4.9 | None | SRR1183449 | Sensitive | lineage4.9 | None | SRR1183694 | Sensitive | lineage4.9 | None | SRR1183483 | Sensitive | lineage4.9 | None | SRR1183359 | Other | lineage4.9 | None | SRR1202427 | Sensitive | lineage4.9 | None | SRR1180647 | Other | lineage4.9 | None | SRR1183461 | Other | lineage4.9 | None | SRR1180750 | Other | lineage4.9 | None | SRR1181516 | Other | lineage4.9 | None | SRR1181587 | Other | lineage4.9 | None | SRR1180643 | Other | lineage4.9 | None | SRR1181232 | Sensitive | lineage4.9 | None | SRR1180118 | Sensitive | lineage4.9 | None | SRR1180144 | Sensitive | lineage4.9 | None | SRR1202399 | Sensitive | lineage4.9 | None | SRR1180047 | Other | lineage4.9 | None | SRR1182982 | Other | lineage4.9 | None | SRR1208937 | Sensitive | lineage4.9 | None | SRR1181582 | Other | lineage4.9 | None | SRR1183377 | Sensitive | lineage4.9 | None | SRR1183412 | Other | lineage4.9 | None | SRR1183187 | Sensitive | lineage4.9 | None | SRR1180669 | Other | lineage4.9 | None | SRR1183152 | Other | lineage4.9 | None | SRR1181221 | Other | lineage4.9 | None | SRR1208397 | Other | lineage4.9 | None | SRR1208498 | Sensitive | lineage4.9 | None | SRR1180834 | Other | lineage4.9 | None | SRR1202550 | Sensitive | lineage4.9 | None | SRR1181226 | Other | lineage4.9 | None | SRR1183200 | Sensitive | lineage4.9 | None | SRR1202508 | Sensitive | lineage4.9 | None | SRR1208653 | Other | lineage4.9 | None | SRR1180530 | Other | lineage4.9 | None |
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