EBG00000313339 - n.3053delC


Drug resistance types
45 Sensitive 1 RR-TB 8 HR-TB 31 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 45 Other
lineage Counts
lineage Count
lineage3 14
La1.4 2
lineage2.2.1 12
La1.8.1 18
lineage4.3.2 2
lineage1.1.3.1 2
lineage4.8.1 2
lineage6.3.1;lineage4.1.3 2
5
lineage6 1
lineage4.1.3 4
lineage4.4.1.1 3
lineage4.1.1 5
lineage4.1.1.3 2
lineage4 4
La1.7.1 7
lineage4.8 4
La1.3 1
lineage1.2.2.2 7
lineage4.5 3
lineage4.1.2.1 4
lineage3.1.1 1
lineage2.2.1.1 5
lineage1.1.2 14
lineage4.3.3 3
lineage4.4 1
lineage4.4.2 1
lineage4.7 1
lineage3.1.2.1 1
lineage4.9 2
lineage3.1 1
lineage4.6.5 1
lineage1.1.3.3 1
spoligotype Counts
spoligotype Count
None 136
Geographic prevalence
Country level data for this variant is available for 36 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045109 Sensitive lineage3 gb
ERR2815529 Other La1.4 None
SRR6832228 MDR-TB lineage2.2.1 None
SRR6046617 HR-TB lineage2.2.1 None
SRR6046738 Other La1.8.1 None
ERR2815515 Other La1.4 None
ERR4829281 Sensitive lineage4.3.2 None
SRR6650340 Sensitive lineage1.1.3.1 None
SRR6982248 Sensitive lineage4.8.1 None
SRR6785453 HR-TB lineage2.2.1 None
SRR998741 MDR-TB lineage6.3.1;lineage4.1.3 None
SRR6797440 Other None
SRR6831774 Pre-XDR-TB lineage2.2.1 None
SRR7131190 Sensitive lineage6 None
SRR6797474 MDR-TB lineage1.1.3.1 None
SRR6964632 MDR-TB lineage3 None
ERR5087567 Other La1.8.1 None
SRR998742 MDR-TB lineage6.3.1;lineage4.1.3 None
SRR7131195 Other lineage2.2.1 None
SRR998746 MDR-TB lineage4.1.3 None
SRR998744 MDR-TB lineage4.1.3 None
SRR998745 MDR-TB lineage4.1.3 None
ERR10748524 RR-TB lineage4.4.1.1 None
SRR7131255 Sensitive lineage4.3.2 None
SRR998747 MDR-TB lineage4.1.3 None
ERR037550 Sensitive lineage4.8.1 mw
ERR10969116 HR-TB lineage4.1.1 None
ERR3335795 Pre-XDR-TB lineage3 pk
ERR3335766 Pre-XDR-TB lineage3 pk
ERR4195616 Other lineage2.2.1 None
ERR4423717 MDR-TB lineage4.1.1.3 None
ERR4457917 Sensitive lineage4 None
ERR4450962 Other La1.7.1 None
ERR4450959 Other La1.7.1 None
ERR459444 Pre-XDR-TB lineage4.8 None
ERR4553648 MDR-TB None
ERR4553783 MDR-TB None
ERR4772220 Other La1.3 None
ERR4796653 Sensitive lineage1.2.2.2 in
ERR4798085 HR-TB lineage1.2.2.2 in
ERR4797894 Other lineage3 in
ERR718560 Sensitive lineage4.5 th
ERR4799239 MDR-TB lineage2.2.1 in
ERR4799699 Sensitive lineage1.2.2.2 in
ERR4810677 Sensitive lineage4.5 cn
ERR4800107 Sensitive lineage3 None
ERR4810676 Sensitive lineage4.5 cn
ERR8976017 Sensitive lineage4.4.1.1 None
ERR7361933 Sensitive lineage4.1.2.1 None
ERR8774397 MDR-TB lineage4.1.1.3 None
ERR9907683 MDR-TB lineage4.1.1 None
ERR9125479 HR-TB lineage1.2.2.2 None
ERR9285797 Sensitive lineage3.1.1 None
ERR9907684 MDR-TB lineage4.1.1 None
ERR9121742 Other lineage2.2.1 None
ERR9125552 Sensitive lineage2.2.1.1 None
ERR9907803 MDR-TB lineage4.1.1 None
ERR9907718 MDR-TB lineage4.1.1 None
SRR1169528 MDR-TB lineage1.1.2 None
SRR1172225 MDR-TB lineage1.1.2 None
SRR1169590 MDR-TB lineage1.1.2 None
SRR1172181 MDR-TB lineage1.1.2 None
SRR1180296 MDR-TB lineage1.1.2 None
SRR1180255 MDR-TB lineage1.1.2 None
SRR13199729 Other La1.7.1 None
SRR1180454 MDR-TB lineage1.1.2 None
SRR1183039 MDR-TB lineage1.1.2 None
SRR12830416 MDR-TB lineage4.3.3 None
SRR12142391 Sensitive lineage4.4 None
SRR12199464 Sensitive None
SRR13199719 Other La1.7.1 None
SRR14508916 Sensitive lineage4.4.1.1 None
SRR1792211 Other La1.7.1 None
SRR15296937 Other La1.7.1 None
SRR16058669 HR-TB lineage1.2.2.2 None
SRR15014635 MDR-TB lineage1.1.2 None
SRR16058553 Sensitive lineage2.2.1.1 None
ERR11081068 HR-TB lineage3 None
SRR18002949 Sensitive lineage2.2.1 None
SRR18213738 Other lineage3 None
SRR20969579 Sensitive lineage2.2.1 None
SRR20970001 Other lineage4.4.2 None
SRR23862097 Other lineage4.7 None
SRR3082138 Sensitive lineage4 None
SRR3085368 Sensitive lineage4 None
ERR3276027 Sensitive lineage4.3.3 nl
ERR4814731 Sensitive lineage1.2.2.2 gb
ERR4814987 Other lineage3.1.2.1 gb
ERR1815548 Other La1.8.1 None
ERR4814956 Sensitive lineage4.9 None
ERR4815094 Sensitive lineage4.1.2.1 gb
ERR1950027 Sensitive lineage4.8 None
ERR1950054 Sensitive lineage4 None
ERR552419 Other lineage4.8 de
ERR2229098 Sensitive lineage4.8 None
ERR4817305 Sensitive lineage1.1.2 gb
SAMN02598987 MDR-TB lineage1.1.2 in
ERR2510804 Other lineage2.2.1 None
ERR2510590 Pre-XDR-TB lineage3.1 pk
ERR2510607 Pre-XDR-TB lineage3 None
ERR4817725 HR-TB lineage4.1.2.1 gb
ERR4817851 Sensitive lineage4.9 None
ERR2513063 Other lineage2.2.1 gb
ERR4817991 Sensitive lineage1.1.2 None
ERR4818304 Sensitive lineage4.3.3 gb
ERR4818042 Other La1.7.1 None
ERR2513428 Other La1.8.1 gb
ERR4818148 Sensitive lineage1.1.2 None
ERR2513801 Sensitive lineage3 gb
SAMN02598992 MDR-TB lineage1.1.2 in
ERR4819174 Sensitive lineage3 gb
SRR5216728 Other La1.8.1 None
ERR2513943 Sensitive None
SRR5216756 Other La1.8.1 None
SRR5216757 Other La1.8.1 None
SRR5216765 Other La1.8.1 None
ERR4820862 Other lineage2.2.1.1 None
ERR2514126 Other lineage4.6.5 gb
SRR5216792 Other La1.8.1 None
SRR5216856 Other La1.8.1 None
SRR5216870 Other La1.8.1 None
SRR5216874 Other La1.8.1 None
SRR5216896 Other La1.8.1 None
SRR5216922 Other La1.8.1 None
SRR5216951 Other La1.8.1 None
ERR2516654 MDR-TB lineage2.2.1.1 pe
SRR5216964 Other La1.8.1 None
SRR5216968 Other La1.8.1 None
ERR2514812 Other lineage1.2.2.2 gb
ERR4820933 Sensitive lineage3 gb
ERR4821205 Sensitive lineage3 gb
ERR4822006 Other lineage4.1.2.1 gb
ERR4821970 Sensitive lineage3 gb
ERR4822079 Sensitive lineage1.1.3.3 gb
ERR4821612 Other lineage2.2.1.1 None
SRR6045019 Other La1.8.1 gb