EBG00000313339 - n.3053delC


Drug resistance types
52 Sensitive 1 RR-TB 9 HR-TB 32 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 63 Other
lineage Counts
lineage Count
La1.8.1 45
lineage1.1.3.2 1
lineage4.3.2 2
lineage4.3.3 2
lineage4 3
lineage4.1.3 4
lineage1.1.3.1 7
lineage1.1.2 12
La1.7.1 5
lineage4.5 3
lineage4.8 7
lineage4.8.1 5
lineage2.2.1.1 5
lineage3 13
lineage1.2.2.2 10
lineage2.2.1 5
lineage2.1 1
lineage4.4.1.1 3
La1.4 3
lineage2.2.1;lineage4.3.3;lineage4.8 2
lineage6.1.2 1
lineage4.1.2.1 3
lineage4.1.1.1 6
lineage4.4 1
lineage4.9 1
lineage3.1.1 1
lineage4.8.1;lineage4.9 1
lineage4.6.5 2
lineage4.1.3;lineage6.3.1 2
lineage4.7 1
lineage4.2.1.1 1
lineage4.4.2 1
spoligotype Counts
spoligotype Count
None 159
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR7617835 Other La1.8.1 None
ERR11489029 MDR-TB lineage1.1.3.2 None
ERR4829281 Sensitive lineage4.3.2 None
ERR3276027 Sensitive lineage4.3.3 nl
SRR3082138 Sensitive lineage4 None
SRR7617470 Other La1.8.1 None
SRR998746 MDR-TB lineage4.1.3 None
SRR6650340 Sensitive lineage1.1.3.1 None
SRR1169590 MDR-TB lineage1.1.2 None
SRR13199719 Other La1.7.1 None
ERR4810677 Sensitive lineage4.5 cn
SRR29681319 Sensitive lineage4.8 None
ERR11466377 Sensitive lineage4.8.1 None
ERR4818042 Other La1.7.1 None
SRR28868743 Sensitive lineage2.2.1.1 None
SRR998747 MDR-TB lineage4.1.3 None
ERR1815548 Other La1.8.1 None
ERR3335766 Pre-XDR-TB lineage3 pk
ERR4814731 Sensitive lineage1.2.2.2 gb
SRR6785453 HR-TB lineage2.2.1 None
SRR25534241 Sensitive lineage2.2.1 None
SRR26399168 Sensitive lineage2.1 None
SRR5216757 Other La1.8.1 None
SRR29230690 Sensitive lineage3 None
ERR8976017 Sensitive lineage4.4.1.1 None
SRR7617695 Other La1.8.1 None
SAMN02598992 MDR-TB lineage1.1.2 in
SRR29356741 Sensitive lineage4.8 None
SRR29906782 Other La1.4 None
ERR2600482 Sensitive lineage2.2.1;lineage4.3.3;lineage4.8 None
SRR7131190 Sensitive lineage6.1.2 None
SRR5216756 Other La1.8.1 None
SRR5216792 Other La1.8.1 None
ERR7361933 Sensitive lineage4.1.2.1 None
ERR4800107 Sensitive lineage3 None
SRR7617365 Other La1.8.1 None
SRR7617383 Other La1.8.1 None
SRR7617603 Other La1.8.1 None
SRR7617467 Other La1.8.1 None
ERR2600483 Sensitive lineage2.2.1;lineage4.3.3;lineage4.8 None
ERR4457917 Sensitive lineage4 None
ERR4553648 MDR-TB lineage1.1.3.1 None
SRR7068869 Other lineage1.2.2.2 None
SRR6982248 Sensitive lineage4.8.1 None
ERR2513428 Other La1.8.1 gb
ERR4820862 Other lineage2.2.1.1 None
SRR7617423 Other La1.8.1 None
SRR7617617 Other La1.8.1 None
ERR10748524 RR-TB lineage4.4.1.1 None
SRR7617759 Other La1.8.1 None
SRR16058669 HR-TB lineage1.2.2.2 None
SRR6964632 MDR-TB lineage3 None
SRR7617703 Other La1.8.1 None
ERR4799699 Sensitive lineage1.2.2.2 in
ERR9907718 MDR-TB lineage4.1.1.1 None
ERR4799239 MDR-TB lineage2.2.1 in
ERR4815094 Sensitive lineage4.1.2.1 gb
SRR1180255 MDR-TB lineage1.1.2 None
SRR5216728 Other La1.8.1 None
ERR718560 Sensitive lineage4.5 th
SRR1180296 MDR-TB lineage1.1.2 None
SRR20969579 Sensitive lineage2.2.1 None
ERR4796653 Sensitive lineage1.2.2.2 in
SRR1169528 MDR-TB lineage1.1.2 None
SRR12142391 Sensitive lineage4.4 None
SRR5216870 Other La1.8.1 None
SRR5216765 Other La1.8.1 None
SRR28045545 HR-TB lineage4.9 None
ERR552419 Other lineage4.8 de
ERR9285797 Sensitive lineage3.1.1 None
ERR9907684 MDR-TB lineage4.1.1.1 None
SRR5216922 Other La1.8.1 None
SRR7617387 Other La1.8.1 None
SRR7617683 Other La1.8.1 None
SRR6797474 MDR-TB lineage1.1.3.1 None
SRR3085368 Sensitive lineage4 None
SRR7069325 Other La1.8.1 None
ERR11081068 HR-TB lineage3 None
SRR29441099 Sensitive lineage3 None
SRR7617469 Other La1.8.1 None
ERR11465954 Sensitive lineage4.8.1;lineage4.9 None
ERR4797894 Other lineage3 in
SRR6046738 Other La1.8.1 None
SRR5216964 Other La1.8.1 None
SRR7617534 Other La1.8.1 None
SRR7617620 Other La1.8.1 None
SRR14508916 Sensitive lineage4.4.1.1 None
SRR7617739 Other La1.8.1 None
SRR1180454 MDR-TB lineage1.1.2 None
ERR4798085 HR-TB lineage1.2.2.2 in
ERR2600612 Sensitive lineage4.8 None
ERR11488646 HR-TB lineage4.8.1 None
SRR29772638 MDR-TB lineage1.1.2 None
SRR7617837 Other La1.8.1 None
SRR998745 MDR-TB lineage4.1.3 None
SRR5216874 Other La1.8.1 None
ERR9125479 HR-TB lineage1.2.2.2 None
SRR5216968 Other La1.8.1 None
SRR21733172 Sensitive lineage2.2.1.1 None
SRR18002949 Sensitive lineage2.2.1 None
SRR29096719 Sensitive lineage3 None
ERR4810676 Sensitive lineage4.5 cn
SRR7617838 Other La1.8.1 None
SRR1172225 MDR-TB lineage1.1.2 None
SRR7070618 Other lineage4.6.5 None
SRR998742 MDR-TB lineage4.1.3;lineage6.3.1 None
SRR15014635 MDR-TB lineage1.1.2 None
SRR7617386 Other La1.8.1 None
SRR6045019 Other La1.8.1 gb
ERR2514126 Other lineage4.6.5 gb
SRR7617422 Other La1.8.1 None
SRR5216856 Other La1.8.1 None
SRR7617543 Other La1.8.1 None
SRR7617842 Other La1.8.1 None
ERR2516654 MDR-TB lineage2.2.1.1 pe
ERR3335795 Pre-XDR-TB lineage3 pk
ERR13289799 Other La1.8.1 None
SRR998744 MDR-TB lineage4.1.3 None
SRR30182443 Sensitive lineage1.1.3.1 None
ERR037550 Sensitive lineage4.8.1 mw
ERR2815529 Other La1.4 None
SRR1172181 MDR-TB lineage1.1.2 None
SRR7617702 Other La1.8.1 None
SRR7617550 Other La1.8.1 None
ERR2600613 Sensitive lineage4.8 None
SRR28381192 Sensitive lineage4.8 None
ERR13265124 Sensitive lineage3 None
SRR23862097 Other lineage4.7 None
SRR29017673 MDR-TB lineage1.1.3.1 None
ERR13266492 Sensitive lineage1.2.2.2 None
ERR4450962 Other La1.7.1 None
SRR21691002 Sensitive lineage4.3.3 None
ERR4821970 Sensitive lineage3 gb
SRR18213738 Other lineage3 None
ERR4553783 MDR-TB lineage1.1.3.1 None
SRR29017143 MDR-TB lineage1.1.3.1 None
SRR1183039 MDR-TB lineage1.1.2 None
ERR11488456 MDR-TB lineage4.8.1 None
SRR5216951 Other La1.8.1 None
SRR16088487 Sensitive lineage4.2.1.1 None
ERR4450959 Other La1.7.1 None
SRR28859686 Sensitive lineage1.2.2.2 None
SAMN02598987 MDR-TB lineage1.1.2 in
ERR9907683 MDR-TB lineage4.1.1.1 None
SRR20970001 Other lineage4.4.2 None
ERR2815515 Other La1.4 None
ERR4821612 Sensitive lineage2.2.1.1 None
ERR12544229 HR-TB lineage4.1.1.1 None
ERR2514812 Other lineage1.2.2.2 gb
SRR5216896 Other La1.8.1 None
ERR9907803 MDR-TB lineage4.1.1.1 None
ERR10969116 HR-TB lineage4.1.1.1 None
SRR22249740 Sensitive lineage3 None
SRR7617464 Other La1.8.1 None
SRR998741 MDR-TB lineage4.1.3;lineage6.3.1 None
ERR12268401 Sensitive lineage4.8 None
SRR21732441 Sensitive lineage4.1.2.1 None
SRR7131255 Sensitive lineage4.3.2 None
SRR13199729 Other La1.7.1 None