EBG00000313339 - n.3053delC
Drug resistance types
52 Sensitive
1 RR-TB
9 HR-TB
32 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
63 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 45 |
| lineage1.1.3.2 | 1 |
| lineage4.3.2 | 2 |
| lineage4.3.3 | 2 |
| lineage4 | 3 |
| lineage4.1.3 | 4 |
| lineage1.1.3.1 | 7 |
| lineage1.1.2 | 12 |
| La1.7.1 | 5 |
| lineage4.5 | 3 |
| lineage4.8 | 7 |
| lineage4.8.1 | 5 |
| lineage2.2.1.1 | 5 |
| lineage3 | 13 |
| lineage1.2.2.2 | 10 |
| lineage2.2.1 | 5 |
| lineage2.1 | 1 |
| lineage4.4.1.1 | 3 |
| La1.4 | 3 |
| lineage2.2.1;lineage4.3.3;lineage4.8 | 2 |
| lineage6.1.2 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.1.1.1 | 6 |
| lineage4.4 | 1 |
| lineage4.9 | 1 |
| lineage3.1.1 | 1 |
| lineage4.8.1;lineage4.9 | 1 |
| lineage4.6.5 | 2 |
| lineage4.1.3;lineage6.3.1 | 2 |
| lineage4.7 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 159 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7617835 | Other | La1.8.1 | None | ERR11489029 | MDR-TB | lineage1.1.3.2 | None | ERR4829281 | Sensitive | lineage4.3.2 | None | ERR3276027 | Sensitive | lineage4.3.3 | nl | SRR3082138 | Sensitive | lineage4 | None | SRR7617470 | Other | La1.8.1 | None | SRR998746 | MDR-TB | lineage4.1.3 | None | SRR6650340 | Sensitive | lineage1.1.3.1 | None | SRR1169590 | MDR-TB | lineage1.1.2 | None | SRR13199719 | Other | La1.7.1 | None | ERR4810677 | Sensitive | lineage4.5 | cn | SRR29681319 | Sensitive | lineage4.8 | None | ERR11466377 | Sensitive | lineage4.8.1 | None | ERR4818042 | Other | La1.7.1 | None | SRR28868743 | Sensitive | lineage2.2.1.1 | None | SRR998747 | MDR-TB | lineage4.1.3 | None | ERR1815548 | Other | La1.8.1 | None | ERR3335766 | Pre-XDR-TB | lineage3 | pk | ERR4814731 | Sensitive | lineage1.2.2.2 | gb | SRR6785453 | HR-TB | lineage2.2.1 | None | SRR25534241 | Sensitive | lineage2.2.1 | None | SRR26399168 | Sensitive | lineage2.1 | None | SRR5216757 | Other | La1.8.1 | None | SRR29230690 | Sensitive | lineage3 | None | ERR8976017 | Sensitive | lineage4.4.1.1 | None | SRR7617695 | Other | La1.8.1 | None | SAMN02598992 | MDR-TB | lineage1.1.2 | in | SRR29356741 | Sensitive | lineage4.8 | None | SRR29906782 | Other | La1.4 | None | ERR2600482 | Sensitive | lineage2.2.1;lineage4.3.3;lineage4.8 | None | SRR7131190 | Sensitive | lineage6.1.2 | None | SRR5216756 | Other | La1.8.1 | None | SRR5216792 | Other | La1.8.1 | None | ERR7361933 | Sensitive | lineage4.1.2.1 | None | ERR4800107 | Sensitive | lineage3 | None | SRR7617365 | Other | La1.8.1 | None | SRR7617383 | Other | La1.8.1 | None | SRR7617603 | Other | La1.8.1 | None | SRR7617467 | Other | La1.8.1 | None | ERR2600483 | Sensitive | lineage2.2.1;lineage4.3.3;lineage4.8 | None | ERR4457917 | Sensitive | lineage4 | None | ERR4553648 | MDR-TB | lineage1.1.3.1 | None | SRR7068869 | Other | lineage1.2.2.2 | None | SRR6982248 | Sensitive | lineage4.8.1 | None | ERR2513428 | Other | La1.8.1 | gb | ERR4820862 | Other | lineage2.2.1.1 | None | SRR7617423 | Other | La1.8.1 | None | SRR7617617 | Other | La1.8.1 | None | ERR10748524 | RR-TB | lineage4.4.1.1 | None | SRR7617759 | Other | La1.8.1 | None | SRR16058669 | HR-TB | lineage1.2.2.2 | None | SRR6964632 | MDR-TB | lineage3 | None | SRR7617703 | Other | La1.8.1 | None | ERR4799699 | Sensitive | lineage1.2.2.2 | in | ERR9907718 | MDR-TB | lineage4.1.1.1 | None | ERR4799239 | MDR-TB | lineage2.2.1 | in | ERR4815094 | Sensitive | lineage4.1.2.1 | gb | SRR1180255 | MDR-TB | lineage1.1.2 | None | SRR5216728 | Other | La1.8.1 | None | ERR718560 | Sensitive | lineage4.5 | th | SRR1180296 | MDR-TB | lineage1.1.2 | None | SRR20969579 | Sensitive | lineage2.2.1 | None | ERR4796653 | Sensitive | lineage1.2.2.2 | in | SRR1169528 | MDR-TB | lineage1.1.2 | None | SRR12142391 | Sensitive | lineage4.4 | None | SRR5216870 | Other | La1.8.1 | None | SRR5216765 | Other | La1.8.1 | None | SRR28045545 | HR-TB | lineage4.9 | None | ERR552419 | Other | lineage4.8 | de | ERR9285797 | Sensitive | lineage3.1.1 | None | ERR9907684 | MDR-TB | lineage4.1.1.1 | None | SRR5216922 | Other | La1.8.1 | None | SRR7617387 | Other | La1.8.1 | None | SRR7617683 | Other | La1.8.1 | None | SRR6797474 | MDR-TB | lineage1.1.3.1 | None | SRR3085368 | Sensitive | lineage4 | None | SRR7069325 | Other | La1.8.1 | None | ERR11081068 | HR-TB | lineage3 | None | SRR29441099 | Sensitive | lineage3 | None | SRR7617469 | Other | La1.8.1 | None | ERR11465954 | Sensitive | lineage4.8.1;lineage4.9 | None | ERR4797894 | Other | lineage3 | in | SRR6046738 | Other | La1.8.1 | None | SRR5216964 | Other | La1.8.1 | None | SRR7617534 | Other | La1.8.1 | None | SRR7617620 | Other | La1.8.1 | None | SRR14508916 | Sensitive | lineage4.4.1.1 | None | SRR7617739 | Other | La1.8.1 | None | SRR1180454 | MDR-TB | lineage1.1.2 | None | ERR4798085 | HR-TB | lineage1.2.2.2 | in | ERR2600612 | Sensitive | lineage4.8 | None | ERR11488646 | HR-TB | lineage4.8.1 | None | SRR29772638 | MDR-TB | lineage1.1.2 | None | SRR7617837 | Other | La1.8.1 | None | SRR998745 | MDR-TB | lineage4.1.3 | None | SRR5216874 | Other | La1.8.1 | None | ERR9125479 | HR-TB | lineage1.2.2.2 | None | SRR5216968 | Other | La1.8.1 | None | SRR21733172 | Sensitive | lineage2.2.1.1 | None | SRR18002949 | Sensitive | lineage2.2.1 | None | SRR29096719 | Sensitive | lineage3 | None | ERR4810676 | Sensitive | lineage4.5 | cn | SRR7617838 | Other | La1.8.1 | None | SRR1172225 | MDR-TB | lineage1.1.2 | None | SRR7070618 | Other | lineage4.6.5 | None | SRR998742 | MDR-TB | lineage4.1.3;lineage6.3.1 | None | SRR15014635 | MDR-TB | lineage1.1.2 | None | SRR7617386 | Other | La1.8.1 | None | SRR6045019 | Other | La1.8.1 | gb | ERR2514126 | Other | lineage4.6.5 | gb | SRR7617422 | Other | La1.8.1 | None | SRR5216856 | Other | La1.8.1 | None | SRR7617543 | Other | La1.8.1 | None | SRR7617842 | Other | La1.8.1 | None | ERR2516654 | MDR-TB | lineage2.2.1.1 | pe | ERR3335795 | Pre-XDR-TB | lineage3 | pk | ERR13289799 | Other | La1.8.1 | None | SRR998744 | MDR-TB | lineage4.1.3 | None | SRR30182443 | Sensitive | lineage1.1.3.1 | None | ERR037550 | Sensitive | lineage4.8.1 | mw | ERR2815529 | Other | La1.4 | None | SRR1172181 | MDR-TB | lineage1.1.2 | None | SRR7617702 | Other | La1.8.1 | None | SRR7617550 | Other | La1.8.1 | None | ERR2600613 | Sensitive | lineage4.8 | None | SRR28381192 | Sensitive | lineage4.8 | None | ERR13265124 | Sensitive | lineage3 | None | SRR23862097 | Other | lineage4.7 | None | SRR29017673 | MDR-TB | lineage1.1.3.1 | None | ERR13266492 | Sensitive | lineage1.2.2.2 | None | ERR4450962 | Other | La1.7.1 | None | SRR21691002 | Sensitive | lineage4.3.3 | None | ERR4821970 | Sensitive | lineage3 | gb | SRR18213738 | Other | lineage3 | None | ERR4553783 | MDR-TB | lineage1.1.3.1 | None | SRR29017143 | MDR-TB | lineage1.1.3.1 | None | SRR1183039 | MDR-TB | lineage1.1.2 | None | ERR11488456 | MDR-TB | lineage4.8.1 | None | SRR5216951 | Other | La1.8.1 | None | SRR16088487 | Sensitive | lineage4.2.1.1 | None | ERR4450959 | Other | La1.7.1 | None | SRR28859686 | Sensitive | lineage1.2.2.2 | None | SAMN02598987 | MDR-TB | lineage1.1.2 | in | ERR9907683 | MDR-TB | lineage4.1.1.1 | None | SRR20970001 | Other | lineage4.4.2 | None | ERR2815515 | Other | La1.4 | None | ERR4821612 | Sensitive | lineage2.2.1.1 | None | ERR12544229 | HR-TB | lineage4.1.1.1 | None | ERR2514812 | Other | lineage1.2.2.2 | gb | SRR5216896 | Other | La1.8.1 | None | ERR9907803 | MDR-TB | lineage4.1.1.1 | None | ERR10969116 | HR-TB | lineage4.1.1.1 | None | SRR22249740 | Sensitive | lineage3 | None | SRR7617464 | Other | La1.8.1 | None | SRR998741 | MDR-TB | lineage4.1.3;lineage6.3.1 | None | ERR12268401 | Sensitive | lineage4.8 | None | SRR21732441 | Sensitive | lineage4.1.2.1 | None | SRR7131255 | Sensitive | lineage4.3.2 | None | SRR13199729 | Other | La1.7.1 | None |
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