EBG00000313339 - n.756_776delACCCACACGCGCATACGCGCG
Drug resistance types
30 Sensitive
1 RR-TB
6 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 30 |
| lineage2.2.1;lineage4.9 | 2 |
| La1.2.BCG | 1 |
| lineage4.1.1.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.8 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4 | 1 |
| lineage4.4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 41 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None |
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