Rv0005 - c.-162_-161insG
Drug resistance types
66 Sensitive
1 RR-TB
2 HR-TB
10 MDR-TB
24 Pre-XDR-TB
1 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 20 |
| lineage4;lineage1.1.3.2 | 1 |
| lineage2.1 | 7 |
| lineage1.1.3.2 | 25 |
| lineage6.2.2 | 2 |
| lineage4.2.1.1 | 2 |
| lineage4.2.2 | 1 |
| lineage1.1.2 | 2 |
| lineage4.8 | 7 |
| lineage4.6.1.1 | 1 |
| lineage4.5 | 7 |
| lineage4.1.2.1 | 2 |
| lineage4 | 1 |
| lineage4.9 | 2 |
| lineage3 | 8 |
| lineage3.1.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.1.3 | 4 |
| lineage4.6 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.6.1.2 | 3 |
| lineage1.2.1.2.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.4.1.2 | 2 |
| lineage1.1.3.2;lineage1.1.2 | 1 |
| lineage1.1.1.1 | 2 |
| lineage1.2.2.2 | 2 |
| lineage2.2.1.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 114 |
Geographic prevalence
Country level data for this variant is available for 99 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2512836 | Sensitive | lineage2.2.1 | gb | ERR212161 | Sensitive | lineage4;lineage1.1.3.2 | mw | SRR11828979 | Pre-XDR-TB | lineage2.1 | th | ERR216940 | Sensitive | lineage1.1.3.2 | mw | ERR550983 | Sensitive | lineage6.2.2 | de | SRR6397680 | Sensitive | lineage4.2.1.1 | ca | ERR4800090 | Pre-XDR-TB | lineage4.2.2 | in | ERR4798245 | Sensitive | lineage1.1.2 | in | SAMN02381033 | Sensitive | lineage4.8 | ug | ERR216952 | Sensitive | lineage1.1.3.2 | None | ERR2510764 | Pre-XDR-TB | lineage4.8 | it | ERR2517004 | Pre-XDR-TB | lineage2.2.1 | gb | SRR5709897 | Pre-XDR-TB | lineage2.1 | th | ERR2514357 | Sensitive | lineage2.2.1 | gb | ERR1199070 | Sensitive | lineage4.6.1.1 | ug | ERR4810881 | Sensitive | lineage4.5 | cn | ERR161181 | Sensitive | lineage1.1.3.2 | mw | ERR4817321 | Sensitive | lineage4.5 | gb | ERR4813275 | Sensitive | lineage4.1.2.1 | pe | SRR5709898 | Pre-XDR-TB | lineage2.1 | th | ERR8665935 | Pre-XDR-TB | lineage2.2.1 | None | ERR2179816 | Sensitive | lineage4 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796331 | HR-TB | lineage4.9 | in | ERR182009 | Sensitive | lineage1.1.3.2 | mw | ERR1034577 | Sensitive | lineage3 | pk | ERR4798283 | Pre-XDR-TB | lineage3.1.2 | in | ERR245820 | Sensitive | lineage1.1.3.2 | None | ERR4810733 | Other | lineage4.5 | cn | ERR4828532 | Other | lineage2.2.1.1 | vn | SRR6280165 | Other | lineage2.2.1 | cn | ERR2515369 | RR-TB | lineage2.2.1 | za | SAMN02381014 | Sensitive | lineage4.8 | ug | ERR4797457 | XDR-TB | lineage4.8 | in | ERR133845 | Pre-XDR-TB | lineage2.2.1 | ru | ERR2200009 | Sensitive | lineage1.1.3.2 | sz | ERR161088 | Sensitive | lineage1.1.3.2 | mw | ERR2512844 | Sensitive | lineage4.1.1.3 | gb | SRR6325452 | Sensitive | lineage4.1.2.1 | us | SRR11828978 | Pre-XDR-TB | lineage2.1 | th | ERR2513232 | HR-TB | lineage4.6 | gb | ERR245748 | Sensitive | lineage1.1.3.2 | mw | ERR4831452 | Sensitive | lineage3 | None | ERR4829127 | Pre-XDR-TB | lineage3 | pk | ERR4829166 | Sensitive | lineage4.1.1.3 | ng | ERR4800400 | Sensitive | lineage3 | in | ERR2199998 | Sensitive | lineage4.3.2.1 | sz | ERR2707123 | MDR-TB | lineage4.6.1.2 | cd | SRR6397375 | Sensitive | lineage4.2.1.1 | ca | ERR8975015 | Sensitive | lineage1.1.3.2 | None | ERR4820206 | Sensitive | lineage1.1.3.2 | gb | ERR4799952 | Pre-XDR-TB | lineage2.2.1 | in | SRR8651557 | Pre-XDR-TB | lineage4.5 | cn | ERR4829955 | MDR-TB | lineage3 | pk | ERR752071 | Sensitive | lineage1.2.1.2.1 | th | ERR2514763 | Sensitive | lineage4.5 | gb | ERR190382 | Sensitive | lineage1.1.3.2 | mw | ERR4818093 | Sensitive | lineage3.1.1 | gb | ERR8975433 | Sensitive | lineage1.1.3.2 | None | ERR2707178 | MDR-TB | lineage4.3.4.2.1 | cd | ERR400364 | Sensitive | lineage4.8 | gb | SAMEA2535315 | Sensitive | lineage1.1.3.2 | None | ERR4831283 | Sensitive | lineage4.8 | de | ERR181752 | Sensitive | lineage1.1.3.2 | mw | ERR245648 | Other | lineage1.1.3.2 | mw | ERR4812686 | Other | lineage4.3.2 | pe | SRR5067601 | Other | lineage2.2.1 | vn | ERR1034607 | MDR-TB | lineage1.1.2 | pk | ERR4799176 | MDR-TB | lineage3 | in | ERR037520 | Sensitive | lineage1.1.3.2 | mw | ERR4831073 | Sensitive | lineage3.1.2.1 | np | ERR4800038 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798655 | Pre-XDR-TB | lineage2.2.1 | in | ERR552267 | Sensitive | lineage6.2.2 | None | SRR6280222 | Other | lineage2.2.1 | cn | ERR4799558 | Pre-XDR-TB | lineage2.2.1 | in | ERR2513520 | Sensitive | lineage4.4.1.2 | gb | ERR4810754 | Sensitive | lineage4.5 | cn | ERR161087 | Sensitive | lineage1.1.3.2;lineage1.1.2 | mw | ERR2199787 | Sensitive | lineage1.1.3.2 | sz | ERR4820687 | Sensitive | lineage1.1.3.2 | gb | ERR4799737 | Sensitive | lineage4.4.1.2 | in | SRR5065266 | Sensitive | lineage1.1.1.1 | vn | ERR4828509 | Sensitive | lineage1.1.1.1 | vn | SRR5709883 | Pre-XDR-TB | lineage2.1 | th | ERR176770 | Sensitive | lineage1.1.3.2 | mw | ERR124640 | Sensitive | lineage1.1.3.2 | mw | SRR671875 | Sensitive | lineage2.2.1 | cn | ERR1199096 | MDR-TB | lineage4.6.1.2 | cd | ERR245782 | Sensitive | lineage1.1.3.2 | mw | ERR2516061 | Sensitive | lineage4.1.1.3 | None | ERR4798194 | MDR-TB | lineage1.2.2.2 | in | SRR6280328 | Other | lineage2.2.1 | cn | ERR8665990 | MDR-TB | lineage2.2.1 | None | ERR2199973 | Sensitive | lineage4.9 | sz | SRR11828977 | Pre-XDR-TB | lineage2.1 | th | ERR2514952 | Sensitive | lineage1.2.2.2 | gb | ERR4811612 | Pre-XDR-TB | lineage2.2.1 | cn | ERR8665934 | Pre-XDR-TB | lineage2.2.1 | None | ERR163994 | Sensitive | lineage1.1.3.2 | mw | SRR5710021 | Pre-XDR-TB | lineage2.1 | th | SRR6280242 | Other | lineage2.2.1 | cn | SRR6397551 | Other | lineage4.1.1.3 | None | ERR4798219 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR2516627 | MDR-TB | lineage3 | nl | ERR6358956 | MDR-TB | lineage4.6.1.2 | None | ERR2512713 | Sensitive | lineage4.3.4.2.1 | gb | ERR4799809 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR2510367 | Sensitive | lineage3 | pk | ERR400462 | Sensitive | lineage4.8 | gb | ERR212079 | Sensitive | lineage1.1.3.2 | mw | ERR4822060 | Sensitive | lineage4.5 | gb | ERR037536 | Sensitive | lineage1.1.3.2 | mw | ERR212073 | Sensitive | lineage1.1.3.2 | mw |
|---|
