Rv0005 - c.1734G>A


Drug resistance types
39 Sensitive 2 RR-TB 2 HR-TB 18 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 2 Other
lineage Counts
lineage Count
lineage2.2.1 51
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La2;lineage2.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.9 1
lineage4.3.3 3
1
lineage2.2.1;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage2.1;lineage6.3 1
spoligotype Counts
spoligotype Count
None 67
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1013581 Pre-XDR-TB lineage2.2.1 None
SRR1202608 Sensitive lineage2.2.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SAMN02398695 Pre-XDR-TB lineage2.2.1 kr
SRR19320503 Sensitive lineage2.2.1 None
SRR1208285 Sensitive lineage2.2.1 None
SRR1208177 Sensitive lineage2.2.1 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
SRR1020015 Sensitive lineage2.2.1 None
SRR1208311 Sensitive lineage2.2.1 None
SRR28467065 HR-TB lineage2.2.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR11082693 Sensitive lineage2.2.1 None
DRR130221 Sensitive lineage2.2.1 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SAMN02360573 Sensitive lineage2.2.1 kr
SRR1208307 Sensitive lineage2.2.1 None
SRR1144757 Pre-XDR-TB lineage2.2.1 None
SRR1013587 Sensitive lineage2.2.1 None
SRR1048972 Sensitive lineage2.2.1 None
SRR1208401 Sensitive lineage2.2.1 None
DRR188996 Sensitive lineage2.2.1 None
ERR4819789 Sensitive lineage2.2.1 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR1208218 Sensitive lineage2.2.1 None
SRR1013588 Sensitive lineage2.2.1 None
ERR8665994 RR-TB lineage4.9 None
ERR3132288 MDR-TB lineage2.2.1 None
SRR1208389 Sensitive lineage2.2.1 None
SRR1202646 Sensitive lineage2.2.1 None
DRR034400 Sensitive lineage2.2.1 None
SRR1208349 Sensitive lineage2.2.1 None
SRR1202601 Sensitive lineage2.2.1 None
SRR21727753 Sensitive lineage2.2.1 None
ERR4811888 Other lineage4.3.3 pe
SRR1640750 RR-TB None
SRR28467051 MDR-TB lineage2.2.1 None
ERR6866360 Sensitive lineage4.3.3 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1202511 Sensitive lineage2.2.1 None
SRR1208251 Sensitive lineage2.2.1 None
SRR1202588 Sensitive lineage2.2.1 None
SRR1202635 Sensitive lineage2.2.1;lineage4.9 None
SRR1048973 Sensitive lineage2.2.1 None
DRR034535 Sensitive lineage2.2.1 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR22251731 Sensitive lineage2.2.1 None
SRR1208333 Sensitive lineage2.2.1 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR1202558 Sensitive lineage2.2.1 None
SRR28467042 MDR-TB lineage2.2.1 None
SRR28467052 HR-TB lineage2.2.1 None
ERR11138615 MDR-TB lineage2.2.1 None
ERR11138628 MDR-TB lineage2.2.1 None
DRR034399 Sensitive lineage2.2.1 None
ERR6866851 Other lineage4.3.3 None
SRR1208279 Sensitive lineage2.2.1 None
SRR7496501 Sensitive lineage2.2.1 us
SRR17657936 MDR-TB lineage2.2.1 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SRR15315834 MDR-TB lineage2.2.1 None
SRR21733049 Sensitive lineage2.2.1 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR1208258 Sensitive lineage2.2.1 None
SRR1208197 Sensitive lineage2.2.1 None