Rv0005 - p.Asp461Asn
Drug resistance types
0 Sensitive
0 RR-TB
12 HR-TB
0 MDR-TB
210 Pre-XDR-TB
4 XDR-TB
65 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1 | 24 |
| lineage2.2.1 | 117 |
| lineage1.1.2 | 5 |
| lineage2.2.1;lineage4.9 | 6 |
| lineage2.2.1.1 | 3 |
| lineage4.8 | 13 |
| lineage4.9 | 23 |
| lineage4.1.1 | 4 |
| lineage4.2.2.2 | 8 |
| lineage1.2.2.2;lineage4.8 | 1 |
| lineage4.3.3 | 21 |
| lineage2.2.1;lineage3 | 1 |
| lineage1.2.2.2 | 2 |
| lineage3 | 4 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 3 |
| lineage4.3.4.2.1 | 1 |
| lineage3.1.2 | 5 |
| lineage4.1.2.1 | 6 |
| lineage2.2.2 | 16 |
| lineage1.1.1.1 | 1 |
| lineage4.3.1 | 2 |
| lineage4.6.2.2 | 3 |
| lineage4.3.4.1 | 7 |
| lineage3.1.2.1 | 3 |
| lineage4.1.1.3 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.1.1.1 | 1 |
| lineage4.3.2 | 2 |
| lineage1.1.1 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 291 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3743408 | Pre-XDR-TB | lineage4.2.1 | None | SRR5153929 | Pre-XDR-TB | lineage4.2.1 | None | SRR6824499 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1461898 | Other | lineage2.2.1 | None | ERR2516986 | Pre-XDR-TB | lineage1.1.2 | gb | SRR1437713 | Other | lineage2.2.1;lineage4.9 | None | ERR4797796 | Other | lineage2.2.1.1 | in | ERR2307481 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798111 | Pre-XDR-TB | lineage4.8 | in | ERR5864663 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864669 | Pre-XDR-TB | lineage2.2.1 | None | SRR1449410 | Other | lineage2.2.1;lineage4.9 | None | SRR1449742 | Other | lineage2.2.1 | None | ERR5866025 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700950 | Other | lineage4.9 | None | ERR12117902 | Pre-XDR-TB | lineage4.1.1 | None | SRR14801458 | Pre-XDR-TB | lineage4.2.1 | None | SRR29772584 | Pre-XDR-TB | lineage4.8 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290600 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR4812974 | Pre-XDR-TB | lineage4.1.1 | None | ERR1035065 | Pre-XDR-TB | lineage2.2.1 | za | ERR11067724 | Pre-XDR-TB | lineage1.2.2.2;lineage4.8 | None | ERR11044841 | Other | lineage4.8 | None | ERR2515153 | Pre-XDR-TB | lineage4.3.3 | za | SRR25206978 | Pre-XDR-TB | lineage2.2.1 | None | SRR23861971 | HR-TB | lineage4.8 | None | ERR4811280 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4811776 | Pre-XDR-TB | lineage2.2.1 | pe | SRR21700900 | Other | lineage4.9 | None | SRR7755697 | Pre-XDR-TB | lineage4.2.1 | None | SRR3105742 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR6797653 | Other | lineage1.2.2.2 | None | SRR28044428 | Other | lineage3 | None | ERR13289309 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR29681439 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR29772394 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488709 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR4820113 | Pre-XDR-TB | lineage3.1.2 | gb | SRR29772602 | Pre-XDR-TB | lineage1.1.2 | None | SRR1449777 | Other | lineage2.2.1 | None | SRR8434867 | Pre-XDR-TB | lineage2.2.1 | None | ERR9807026 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700947 | Other | lineage4.9 | None | SRR21700893 | Other | lineage4.9 | None | SRR1174825 | Pre-XDR-TB | lineage4.3.3 | None | SRR6485041 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13289009 | Pre-XDR-TB | lineage4.8 | None | ERR5866563 | Pre-XDR-TB | lineage2.2.1 | None | SRR25534364 | Other | lineage2.2.1 | None | SRR7516309 | Pre-XDR-TB | lineage2.2.1 | None | SRR5065404 | Other | lineage2.2.1 | vn | ERR067644 | Pre-XDR-TB | lineage2.2.1 | ru | ERR7911308 | Pre-XDR-TB | lineage2.2.1 | vn | ERR7911665 | Pre-XDR-TB | lineage2.2.2 | za | ERR6052055 | Pre-XDR-TB | lineage2.2.2 | None | ERR1035101 | Pre-XDR-TB | lineage1.1.1.1 | vn | SRR1172339 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762378 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975707 | Pre-XDR-TB | lineage4.8 | None | ERR227996 | Pre-XDR-TB | lineage2.2.1 | ru | ERR5866024 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762308 | Pre-XDR-TB | lineage4.2.1 | None | ERR4798347 | Pre-XDR-TB | lineage1.1.2 | in | SRR25206949 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02414970 | Pre-XDR-TB | lineage4.2.2.2 | se | SRR24255936 | Pre-XDR-TB | lineage2.2.1 | None | ERR13289476 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800241 | Pre-XDR-TB | lineage2.2.1 | in | ERR13290598 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR3014593 | Pre-XDR-TB | lineage4.3.1 | tn | ERR10762369 | Pre-XDR-TB | lineage4.2.1 | None | SRR25207079 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817287 | Pre-XDR-TB | lineage3.1.2 | None | SRR10380060 | Pre-XDR-TB | lineage4.2.1 | None | SRR3085251 | Pre-XDR-TB | lineage4.2.1 | None | SRR6458396 | Pre-XDR-TB | lineage4.3.3 | None | ERR4829124 | HR-TB | lineage4.6.2.2 | None | SRR11567796 | Pre-XDR-TB | lineage2.2.1 | None | ERR5758435 | Pre-XDR-TB | lineage2.2.2 | None | ERR5758474 | Pre-XDR-TB | lineage2.2.2 | None | SRR21700890 | Other | lineage4.9 | None | ERR4829820 | Pre-XDR-TB | lineage4.2.1 | it | ERR4796999 | Pre-XDR-TB | lineage2.2.1 | in | SRR7341687 | Pre-XDR-TB | lineage4.8 | ro | ERR4813814 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR7911567 | Pre-XDR-TB | lineage2.2.2 | za | SRR8217900 | Other | lineage2.2.1.1 | None | ERR4799553 | HR-TB | lineage3.1.2.1 | None | SRR28045567 | Pre-XDR-TB | lineage3 | None | SRR29385500 | Other | lineage2.2.1 | None | SRR29772471 | Pre-XDR-TB | lineage4.8 | None | ERR4809347 | Pre-XDR-TB | lineage4.3.3 | za | ERR3014585 | Pre-XDR-TB | lineage4.3.1 | tn | SRR25206880 | Pre-XDR-TB | lineage2.2.1 | None | SRR3587486 | Other | lineage2.2.1 | None | SRR7755690 | Pre-XDR-TB | lineage4.2.1 | None | SRR833214 | Other | lineage2.2.1 | None | ERR5864668 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307480 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700899 | Other | lineage4.9 | None | ERR4798022 | Pre-XDR-TB | lineage4.1.1.3 | in | ERR4810898 | XDR-TB | lineage2.2.1 | cn | SRR10397231 | Pre-XDR-TB | lineage2.2.1 | None | ERR760731 | Pre-XDR-TB | lineage4.1.2.1.1 | ar | SRR1162996 | Pre-XDR-TB | lineage4.3.3 | None | SRR21700889 | Other | lineage4.9 | None | SRR21798449 | Pre-XDR-TB | lineage4.3.3 | None | ERR4831487 | Pre-XDR-TB | lineage3 | None | ERR8025576 | Pre-XDR-TB | lineage2.2.2 | None | ERR5864670 | Pre-XDR-TB | lineage2.2.1 | None | SRR28046117 | Other | lineage1.2.2.2 | None | ERR12916916 | XDR-TB | lineage2.2.1 | None | SRR25206961 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498508 | Pre-XDR-TB | lineage4.2.1 | None | ERR9993197 | Pre-XDR-TB | lineage4.8 | None | SRR22461705 | Pre-XDR-TB | lineage4 | None | ERR4800485 | Pre-XDR-TB | lineage2.2.1 | in | SRR7652980 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR29274165 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR12420516 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700895 | Other | lineage4.9 | None | ERR2517100 | Pre-XDR-TB | lineage4.2.2.2 | gb | ERR4809080 | Pre-XDR-TB | lineage4.3.2.1 | za | ERR4813738 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR12420747 | Pre-XDR-TB | lineage2.2.1 | None | SRR1449792 | Other | lineage2.2.1;lineage4.9 | None | SRR14782570 | Pre-XDR-TB | lineage4.2.1 | None | ERR4407526 | Other | lineage2.2.1 | None | SRR1449768 | Other | lineage2.2.1;lineage4.9 | None | SRR7755707 | Pre-XDR-TB | lineage4.2.1 | None | SRR25207369 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700952 | Other | lineage4.9 | None | ERR4813890 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR11049201 | Other | lineage4.8 | None | ERR7911053 | Pre-XDR-TB | lineage4.2.1 | md | ERR3273206 | Pre-XDR-TB | lineage2.2.2 | None | SRR29273812 | Pre-XDR-TB | lineage4.8 | None | SRR2075822 | Pre-XDR-TB | lineage2.2.2 | None | SRR11871430 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045389 | Pre-XDR-TB | lineage2.2.1 | None | SRR22461701 | HR-TB | lineage4.1.2.1 | None | ERR9992869 | XDR-TB | lineage4.1.1.1 | None | ERR4799443 | Pre-XDR-TB | lineage1.1.2 | in | SRR5153327 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162953 | Pre-XDR-TB | lineage2.2.1 | None | SRR671754 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1169128 | Pre-XDR-TB | lineage2.2.1 | None | ERR6052029 | Pre-XDR-TB | lineage2.2.2 | None | SRR24256026 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR21700898 | Other | lineage4.9 | None | SRR10344325 | Other | lineage4.9 | None | SRR1011499 | Other | lineage2.2.1 | None | SRR10305617 | Pre-XDR-TB | lineage2.2.1 | None | SRR24827289 | Other | lineage4.3.4.1 | None | SRR21700894 | Other | lineage4.9 | None | SRR21700891 | Other | lineage4.9 | None | SRR1165366 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR4821613 | Pre-XDR-TB | lineage3.1.2 | gb | SRR1166935 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR27107281 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR10762467 | Pre-XDR-TB | lineage4.2.1 | None | SRR1163385 | Pre-XDR-TB | lineage4.3.3 | None | SRR1167151 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR5864662 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911039 | Pre-XDR-TB | lineage2.2.1 | md | SRR1449364 | Other | lineage2.2.1;lineage4.9 | None | SRR14801647 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700896 | Other | lineage4.9 | None | ERR6865658 | HR-TB | lineage4.1.1 | None | SRR28868535 | Other | lineage2.2.1 | None | SRR13232500 | Pre-XDR-TB | lineage4.3.3 | None | ERR13285927 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163423 | Pre-XDR-TB | lineage2.2.1 | None | SRR11871438 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700902 | Other | lineage4.9 | None | ERR551782 | Pre-XDR-TB | lineage2.2.1 | None | ERR13258398 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827459 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814951 | Pre-XDR-TB | lineage3.1.2 | gb | SRR671794 | Pre-XDR-TB | lineage2.2.1 | cn | SRR21887659 | Pre-XDR-TB | lineage2.2.1 | None | ERR1873544 | Pre-XDR-TB | lineage2.2.2 | za | ERR2510847 | Pre-XDR-TB | lineage4.2.1 | it | ERR13284326 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700954 | Other | lineage4.9 | None | ERR5864661 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811612 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2653083 | Pre-XDR-TB | lineage4.3.3 | None | SRR13232771 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02419626 | Pre-XDR-TB | lineage4.3.3 | by | ERR5864671 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653164 | Pre-XDR-TB | lineage4.3.2 | None | ERR1035103 | Pre-XDR-TB | lineage2.2.1 | vn | SRR26399372 | Other | lineage2.2.1.1 | None | SRR16088347 | Pre-XDR-TB | lineage2.2.1 | None | SRR18914240 | Other | lineage4.3.4.1 | None | SRR1723537 | HR-TB | lineage2.2.1 | cn | SRR21700955 | Other | lineage4.9 | None | ERR4799789 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261091 | Other | lineage3.1.2.1 | None | ERR2516997 | Pre-XDR-TB | lineage1.1.2 | gb | SRR6824527 | Pre-XDR-TB | lineage2.2.1 | cn | SRR23310993 | Pre-XDR-TB | lineage4.2.1 | None | ERR4810461 | Pre-XDR-TB | lineage2.2.1 | cn | SRR19276642 | Pre-XDR-TB | lineage4.3.3 | None | SRR28498675 | Pre-XDR-TB | lineage4.2.1 | None | SRR13232756 | Pre-XDR-TB | lineage4.3.3 | None | ERR2510711 | Pre-XDR-TB | lineage4.2.1 | it | SRR10344326 | Other | lineage4.9 | None | SRR7516316 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256259 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002905 | Other | lineage2.2.1 | None | SRR24255910 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811298 | Pre-XDR-TB | lineage2.2.1 | cn | DRR130071 | Pre-XDR-TB | lineage2.2.1 | None | SRR1449839 | Other | lineage2.2.1 | None | SRR3587420 | Other | lineage2.2.1 | None | SRR3587425 | Other | lineage2.2.1 | None | SRR28498698 | Pre-XDR-TB | lineage4.2.1 | None | ERR13290999 | Pre-XDR-TB | lineage2.2.1 | None | SRR29681252 | HR-TB | lineage2.2.1 | None | ERR4811880 | Pre-XDR-TB | lineage4.3.4.1 | pe | ERR4814026 | Other | lineage4.3.4.1 | br | ERR4829134 | HR-TB | lineage4.6.2.2 | ng | SRR7653610 | Pre-XDR-TB | lineage2.2.1 | None | ERR4025111 | HR-TB | lineage4.1.1 | None | ERR7911657 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911699 | Pre-XDR-TB | lineage4.8 | za | SRR14782611 | HR-TB | lineage4.2.1 | None | SRR1403647 | Other | lineage2.2.1 | None | SRR6807708 | Pre-XDR-TB | lineage2.2.1 | None | SRR7655983 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR2515614 | Pre-XDR-TB | lineage4.3.3 | za | ERR4799602 | Pre-XDR-TB | lineage2.2.1 | in | SRR29539531 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762331 | Pre-XDR-TB | lineage2.2.1 | None | SRR28776755 | Other | lineage1.1.1 | None | ERR11798737 | Pre-XDR-TB | lineage4.2.1 | None | ERR4821592 | Pre-XDR-TB | lineage3.1.2 | gb | ERR5864667 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811295 | Pre-XDR-TB | lineage2.2.1 | cn | SRR23310815 | Pre-XDR-TB | lineage4.2.1 | None | ERR5864665 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700951 | Other | lineage4.9 | None | SRR29539055 | Pre-XDR-TB | lineage2.2.1 | None | SRR10344324 | Other | lineage4.9 | None | ERR9806927 | Pre-XDR-TB | lineage4.8 | None | ERR2653143 | Pre-XDR-TB | lineage4.3.2 | None | ERR7911011 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287830 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR2515754 | Pre-XDR-TB | lineage4.3.3 | za | SRR11871445 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255931 | XDR-TB | lineage2.2.1 | None | SRR27107263 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR108455 | Pre-XDR-TB | lineage2.2.1 | ru | SRR1162897 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR7069455 | Pre-XDR-TB | lineage3 | None | SRR1461903 | Other | lineage2.2.1 | None | SRR25206952 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864664 | Pre-XDR-TB | lineage2.2.1 | None | ERR5918003 | Pre-XDR-TB | lineage2.2.2 | za | ERR8025709 | Pre-XDR-TB | lineage2.2.2 | None | ERR4810948 | Pre-XDR-TB | lineage2.2.1 | cn | ERR6362083 | Pre-XDR-TB | lineage2.2.2 | None | SRR5065590 | Other | lineage2.2.1 | vn | SRR25515456 | Other | lineage2.2.1 | None | ERR2179769 | Other | lineage4.5 | cn | SRR21700948 | Other | lineage4.9 | None | ERR4829161 | HR-TB | lineage4.6.2.2 | ng | SRR3743494 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887771 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02419655 | Pre-XDR-TB | lineage2.2.1 | by | SRR21700949 | Other | lineage4.9 | None | ERR2653151 | HR-TB | lineage4.3.3 | None | SRR1449805 | Other | lineage2.2.1;lineage4.9 | None | SRR11871441 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810791 | Pre-XDR-TB | lineage2.2.1 | cn | ERR5864666 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665962 | Pre-XDR-TB | lineage4.3.3 | None | SRR6807754 | Pre-XDR-TB | lineage4.3.3 | None | ERR10748120 | Pre-XDR-TB | lineage2.2.2 | None | SRR1437718 | Other | lineage2.2.1 | None | ERR4800130 | Other | lineage3.1.2.1 | None | SRR3587422 | Other | lineage2.2.1 | None | SRR13232467 | Pre-XDR-TB | lineage4.3.3 | None | ERR4813706 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR1168959 | Pre-XDR-TB | lineage4.3.3 | None | SRR10869238 | Pre-XDR-TB | lineage2.2.2 | None | SRR7755682 | Pre-XDR-TB | lineage4.2.1 | None | SRR21700892 | Other | lineage4.9 | None |
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