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SRA data
Rv0006
- c.1047C>A
Drug resistance types
2 Sensitive
3 RR-TB
7 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
8 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.1.2.1
6
M.canetti;lineage2.1;lineage4.9
5
lineage2.1;lineage4.1.1.1;lineage6.3
2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
2
lineage2.2.1
2
lineage4.9
1
M.canetti;lineage4.3.1;lineage4.9
1
1
lineage4.1.1.3
1
lineage2.1;lineage4.9
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
24
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR176658
HR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR278594
HR-TB
lineage2.1;lineage4.9
None
ERR386953
HR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR4811207
Sensitive
lineage2.2.1
cn
ERR4816551
HR-TB
lineage4.1.1.3
None
ERR5917710
Other
lineage4.1.2.1
None
ERR9119138
RR-TB
M.canetti;lineage4.3.1;lineage4.9
None
SAMN02414850
Other
lineage4.1.2.1
None
SRR1162864
Other
lineage4.1.2.1
None
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