Rv0006 - c.1062C>A
Drug resistance types
0 Sensitive
3 RR-TB
7 HR-TB
6 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 5 |
| M.canetti;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage4.9 | 1 |
| M.canetti;lineage4.3.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.1.2.1 | 7 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 25 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675269 | RR-TB | lineage4.9 | None | ERR9119138 | RR-TB | M.canetti;lineage4.3.1;lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR3675561 | Other | M.canetti;lineage2.1;lineage4.9 | None | ERR278594 | HR-TB | lineage2.1;lineage4.9 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR386953 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR176658 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1165506 | Other | lineage4.1.2.1 | None | ERR5917710 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1162864 | Other | lineage4.1.2.1 | None | SRR1640750 | Other | None | SRR1163221 | MDR-TB | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None |
|---|
