Rv0006 - c.409_411delTTGinsCC


Drug resistance types
4 Sensitive 4 RR-TB 24 HR-TB 11 MDR-TB 2 Pre-XDR-TB 2 XDR-TB 83 Other
lineage Counts
lineage Count
M.canetti;lineage4.2;lineage4.9 1
lineage4.1.1.1 2
lineage4.9 11
lineage2.2.1 5
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.1;lineage4.9 11
lineage4.1.3 2
lineage5.2 2
La3;lineage4.9 4
lineage3 2
lineage2.1;lineage4.9;lineage6.3 7
M.canetti;lineage2.2 2
lineage4.6.2.2 3
lineage4.1.2.1 8
17
lineage4.9;lineage6.3 6
La3;lineage2.1;lineage6.3 1
La3;lineage2.1;lineage4.9 3
lineage6.3.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.7 1
lineage2.1;lineage6.3 2
lineage2.1 2
lineage4 3
lineage4.6.1.1 3
lineage4.4.1.1 2
lineage4.3.2 1
lineage4.1;lineage4.8 2
lineage4.8 2
M.canetti;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage2.2.2;lineage6.2 2
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.6.3;lineage4.9 1
lineage4.3.4.2.1 1
lineage2.2 1
La3;lineage1.1.2 1
La1.2.BCG;La1.8.1 1
lineage2.2.1;lineage6.3 1
lineage4.2;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage1.1;lineage4 1
M.canetti;lineage4.9 1
La1.7;lineage3.1;lineage4 1
lineage2.1;lineage4.3.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 130
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR1184294 Other lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9119500 MDR-TB lineage5.2 None
SRR1165628 Other La3;lineage4.9 None
ERR4797588 MDR-TB lineage3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786617 Other lineage4.1.1.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR4815604 Other None
ERR9117709 Other None
SRR6789626 Other None
ERR212001 HR-TB None
ERR9787197 Other None
SRR3675236 Other None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4800341 HR-TB lineage3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR702406 Other lineage2.1 None
SRR3675214 Other lineage4.9 None
ERR3283044 Other lineage4 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR4872094 MDR-TB lineage5.2 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR3797070 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR3804155 Other lineage4.1.2.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675311 Other lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None
SRR3675572 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR234659 HR-TB None
SRR7496517 Other None
SRR28119805 Other lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR1196583 Other lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
SRR1183049 RR-TB lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR6046066 Other lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4798823 HR-TB lineage4 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR9786421 Other lineage4.1.2.1 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR7496509 Other None
SRR1184381 MDR-TB None
ERR11252664 Other lineage2.2.1 None
ERR9786843 Other None
SRR7535086 Other None
SRR18213713 HR-TB None
ERR4407463 HR-TB None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR1167384 Other La3;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR4819322 Other lineage1.1;lineage4 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR9786627 Other lineage4.1.2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496472 Other lineage4.9 None