Rv0006 - c.409_411delTTGinsCC
Drug resistance types
2 Sensitive
1 RR-TB
11 HR-TB
2 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La3;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage1.1;lineage4 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.8 | 1 |
| lineage4.9 | 6 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.7 | 1 |
| La3;lineage1.1.2 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.1;lineage4.8 | 1 |
| lineage4.1.3 | 1 |
| lineage2.1 | 1 |
| 3 | |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage6.3.1 | 1 |
| lineage2.1;lineage6.3 | 1 |
| lineage4 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.3.2 | 1 |
| La3;lineage2.1;lineage4.9 | 3 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 44 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1183049 | RR-TB | lineage2.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4819322 | Other | lineage1.1;lineage4 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | SRR1165699 | Other | lineage4.9 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR11252664 | Other | lineage2.2.1 | None | SRR28119805 | Other | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | SRR1196583 | Other | lineage4.9 | None | ERR4819932 | Other | lineage4.7 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR212001 | HR-TB | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3675275 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR6046066 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675311 | Other | lineage4.9 | None | SRR1184381 | MDR-TB | None | ERR9787197 | Other | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None |
|---|
