SRR18149460
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR5818705
|
Sensitive
|
lineage1.2.2.2
|
dj
|
ERR4829909
|
Sensitive
|
lineage1.2.2.2
|
it
|
ERR4798917
|
Sensitive
|
lineage1.2.2.2
|
in
|
ERR4553597
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SAMN02599110
|
HR-TB
|
lineage1.2.2.2
|
in
|
ERR4798024
|
Sensitive
|
lineage1.2.2.2
|
in
|
ERR2517250
|
HR-TB
|
lineage1.2.2.2
|
nl
|
ERR403384
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR6797662
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR6046919
|
HR-TB
|
lineage1.2.2.2
|
gb
|
SRR8380916
|
Sensitive
|
lineage1.2.2.2
|
in
|
ERR2516447
|
MDR-TB
|
lineage1.2.2.2
|
nl
|
ERR4815188
|
Sensitive
|
lineage1.1.2
|
None
|
ERR4818649
|
Sensitive
|
lineage1.2.2.2
|
gb
|
SAMN02599080
|
Sensitive
|
lineage1.2.2.2
|
in
|
SRR18149458
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR18149478
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR1172145
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR1172959
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR1175116
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR3275539
|
HR-TB
|
lineage1.2.2.2
|
nl
|
ERR2514190
|
HR-TB
|
lineage1.2.2.2
|
gb
|
SAMN02599010
|
Sensitive
|
lineage1.2.2.2
|
in
|
ERR4820411
|
HR-TB
|
lineage1.2.2.2
|
gb
|
ERR2513530
|
Sensitive
|
lineage1.2.2.2
|
gb
|
SRR1169537
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR9217366
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR230019
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR16370596
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR30182435
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR6797834
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR21733261
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR6797838
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR7902650
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR1183026
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR4800719
|
Other
|
lineage1.2.2.2
|
None
|
ERR4819413
|
Sensitive
|
lineage1.2.2.2
|
gb
|
ERR4820413
|
Sensitive
|
lineage1.2.2.2
|
gb
|
ERR4798607
|
MDR-TB
|
lineage1.2.2.2
|
in
|
ERR278531
|
HR-TB
|
lineage1.2.2.2;lineage3
|
None
|
ERR3275937
|
Sensitive
|
lineage1.2.2.2
|
nl
|
ERR4797258
|
Other
|
lineage1.2.2.2
|
None
|
SRR2100659
|
Sensitive
|
lineage1.2.2.2;lineage3
|
None
|
SRR6650154
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR26112664
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR1169559
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR2100197
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR11050873
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR2100989
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR2512985
|
Sensitive
|
lineage1.2.2.2
|
gb
|
SRR1172991
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR28046098
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28045258
|
Pre-XDR-TB
|
lineage1.2.2.2
|
None
|
SRR28045876
|
RR-TB
|
lineage1.2.2.2
|
None
|
SRR28046205
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28044586
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR230032
|
Sensitive
|
lineage1.2.2.2;lineage3
|
None
|
SRR29772803
|
Pre-XDR-TB
|
lineage1.2.2.2
|
None
|
SRR30336490
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR29230675
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR386890
|
HR-TB
|
lineage1.2.2.2;lineage3
|
None
|
SRR10500310
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR4553499
|
RR-TB
|
|
None
|
ERR3132241
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR11348193
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR27450558
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR29017467
|
RR-TB
|
lineage1.2.2.2
|
None
|
ERR12544078
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR7902772
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR2100918
|
HR-TB
|
lineage1.2.2.2;lineage3
|
None
|
ERR9125004
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR29017238
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR2100647
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR7070127
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR13252822
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR4800712
|
Other
|
lineage1.2.2.2
|
None
|
SRR1172265
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR4553862
|
RR-TB
|
lineage1.2.2.2
|
None
|
SRR17856652
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR4831459
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR4828935
|
HR-TB
|
lineage1.2.2.2
|
it
|
SRR1173683
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR2514629
|
HR-TB
|
lineage1.2.2.2
|
gb
|
SRR5818643
|
Sensitive
|
lineage1.2.2.2
|
dj
|
SRR9217360
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR123906
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR28046237
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR4818706
|
HR-TB
|
lineage1.2.2.2
|
gb
|
DRR189046
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR21676315
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR1175128
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR1172829
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR21691173
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR3470572
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR2514385
|
Sensitive
|
lineage1.2.2.2
|
gb
|
ERR13290142
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR4815160
|
Other
|
lineage1.2.2.2
|
None
|
SAMN02599025
|
Sensitive
|
lineage1.1.2;lineage1.2.2.2
|
in
|
SRR6797654
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR19315444
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR29017278
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR2469366
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR29289311
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR26111950
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28045063
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR3470555
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR7069993
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR5818669
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR6044914
|
Sensitive
|
lineage1.2.2.2
|
gb
|
ERR294186
|
Sensitive
|
lineage1.2.2.2
|
None
|
SAMN02599081
|
HR-TB
|
lineage1.2.2.2
|
in
|
ERR7902676
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR13266987
|
Pre-XDR-TB
|
lineage1.2.2.2
|
None
|
ERR117628
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR4796490
|
HR-TB
|
lineage1.2.2.2
|
in
|
SRR1172990
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR6797681
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR5818680
|
Sensitive
|
lineage1.2.2.2
|
dj
|
SRR6797745
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR270670
|
HR-TB
|
lineage1.2.2.2
|
None
|
SAMN02599132
|
Sensitive
|
lineage1.2.2.2
|
in
|
SRR1172905
|
Sensitive
|
lineage1.2.2.2
|
None
|
SAMN02599065
|
Sensitive
|
lineage1.2.2.2
|
in
|
ERR2513584
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR1169516
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28046214
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR29230909
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR1183078
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR6797504
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR9117741
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28045482
|
Sensitive
|
La1.1;lineage1.2.2.2
|
None
|
ERR4553413
|
MDR-TB
|
|
None
|
SRR1172287
|
Sensitive
|
lineage1.2.2.2
|
None
|
SAMN02598979
|
Sensitive
|
lineage1.2.2.2
|
in
|
ERR2446193
|
HR-TB
|
lineage1.2.2.2
|
nl
|
ERR266578
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR4815669
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR1180155
|
Sensitive
|
lineage1.1.2;lineage1.2.2.2
|
None
|
SRR1180247
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR6479545
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR6650387
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR1180449
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR18213878
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR1173092
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR2100207
|
HR-TB
|
lineage1.2.2.2;lineage3
|
None
|
ERR4800709
|
Other
|
lineage1.2.2.2
|
None
|
ERR4800705
|
Other
|
lineage1.2.2.2
|
None
|
ERR4553495
|
MDR-TB
|
|
None
|
SRR1173043
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR1175078
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR2099963
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR4798072
|
Sensitive
|
lineage1.2.2.2
|
in
|
ERR4816928
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR387007
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR1172182
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR15014628
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR29440714
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR7902581
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR11348204
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR28044869
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR29231642
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR4553861
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR3082083
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR6797839
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR13267767
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR9117774
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR1180473
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR1180317
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR29052667
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR3470666
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR4553977
|
RR-TB
|
|
None
|
ERR1213948
|
HR-TB
|
lineage1.2.2.2
|
bd
|
ERR2512489
|
Sensitive
|
lineage1.2.2.2
|
gb
|
SRR1169518
|
Sensitive
|
lineage1.1.2;lineage1.2.2.2
|
None
|
SRR7131042
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR1173329
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR11049175
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR4814747
|
HR-TB
|
lineage1.2.2.2
|
gb
|
SRR1183154
|
Sensitive
|
lineage1.1;lineage1.2.2.2
|
None
|
SAMN02599051
|
Sensitive
|
lineage1.2.2.2
|
in
|
ERR117639
|
HR-TB
|
lineage1.2.2.2;lineage3
|
None
|
SRR16057995
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR1180338
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR22251915
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR13180306
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR1172220
|
Sensitive
|
lineage1.1.2;lineage1.2.2.2
|
None
|
SRR1174296
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR7898216
|
MDR-TB
|
lineage1.2.2.2
|
in
|
SRR18149498
|
Sensitive
|
lineage1.2.2.2
|
None
|
SAMN02598989
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR4820355
|
HR-TB
|
lineage1.2.2.2
|
gb
|
ERR3275939
|
Sensitive
|
lineage1.2.2.2
|
nl
|
SRR13180329
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR4797259
|
Other
|
lineage1.2.2.2
|
None
|
SRR5818642
|
MDR-TB
|
lineage1.2.2.2
|
dj
|
SRR1180215
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR6797597
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR29017577
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR4814780
|
HR-TB
|
lineage1.2.2.2
|
gb
|
ERR4814817
|
HR-TB
|
lineage1.2.2.2
|
gb
|
SRR28045041
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR4800220
|
Sensitive
|
lineage1.2.2.2
|
in
|
ERR4818317
|
Sensitive
|
lineage1.2.2.2
|
gb
|
ERR11044817
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR7902698
|
Sensitive
|
lineage1.2.2.2;lineage4.2
|
None
|
SRR2100788
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR18289186
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR8380879
|
Sensitive
|
lineage1.2.2.2
|
in
|
ERR4815517
|
Other
|
lineage1.2.2.2
|
None
|
SAMN02599107
|
Sensitive
|
lineage1.2.2.2
|
in
|
SRR5818672
|
Other
|
lineage1.2.2.2
|
None
|
ERR4815788
|
HR-TB
|
lineage1.2.2.2
|
gb
|
ERR4553781
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR17406767
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR4815719
|
HR-TB
|
lineage1.2.2.2
|
gb
|
ERR4816458
|
Other
|
lineage1.2.2.2
|
None
|
ERR2516398
|
Sensitive
|
lineage1.2.2.2
|
be
|
ERR4799237
|
Sensitive
|
lineage1.2.2.2
|
in
|
SRR29772399
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR1169505
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR4815905
|
Other
|
lineage1.2.2.2
|
gb
|
SRR21690573
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR24114344
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR2514293
|
HR-TB
|
lineage1.2.2.2
|
gb
|
ERR4798433
|
MDR-TB
|
lineage1.2.2.2
|
in
|
SRR1173178
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR21674633
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR6797596
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR17856667
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR4820537
|
HR-TB
|
lineage1.2.2.2
|
None
|