Rv0006 - p.Gly88Cys


Drug resistance types
0 Sensitive 0 RR-TB 0 HR-TB 0 MDR-TB 181 Pre-XDR-TB 2 XDR-TB 11 Other
lineage Counts
lineage Count
lineage4.4.1.1.1 2
lineage4.3.3;lineage2.2.1 5
lineage2.2 4
lineage2.2.2 58
lineage4.1.2.1 2
lineage2.2.1 49
lineage4.3.3 20
lineage4.2.1 6
lineage4.1.1.3 5
lineage4.5 5
lineage3.1.2 2
lineage1.1.2 1
lineage2.2.1.1 6
lineage4.3.2.1;lineage2.2.2 2
lineage4.4.1.1 2
lineage3 9
lineage4.1.1 1
lineage4.3.4.2 1
lineage4.8 1
lineage4.1 1
lineage4.3.4.1 1
lineage1.2.2.2 1
lineage4.3.2 1
lineage4.2 1
lineage4.2.1;lineage2.2.1 1
2
lineage2.2.1.2 1
lineage4;lineage3.1.2 1
lineage4 1
lineage1.2.1.2.1 1
lineage3.1.1 1
spoligotype Counts
spoligotype Count
None 194
Geographic prevalence
Country level data for this variant is available for 49 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1140936 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1163172 Pre-XDR-TB lineage4.3.3;lineage2.2.1 None
SRR1163374 Pre-XDR-TB lineage4.3.3;lineage2.2.1 None
SRR1165229 Pre-XDR-TB lineage2.2 None
SRR1165247 Pre-XDR-TB lineage2.2.2 None
SRR1165232 Pre-XDR-TB lineage2.2.2 None
SRR1167181 Pre-XDR-TB lineage2.2.2 None
SRR1165238 Pre-XDR-TB lineage2.2.2 None
SRR1167310 Pre-XDR-TB lineage2.2 None
SRR1167277 Pre-XDR-TB lineage2.2 None
SRR1167311 Pre-XDR-TB lineage2.2.2 None
SRR1169046 Pre-XDR-TB lineage4.3.3;lineage2.2.1 None
SRR1172073 Pre-XDR-TB lineage4.3.3;lineage2.2.1 None
SRR1175331 Pre-XDR-TB lineage2.2.2 None
SRR1173137 Pre-XDR-TB lineage2.2.2 None
SRR1173202 Pre-XDR-TB lineage2.2.2 None
SRR1173405 Pre-XDR-TB lineage2.2.2 None
SRR1173423 Pre-XDR-TB lineage2.2.2 None
SRR1173500 Pre-XDR-TB lineage2.2.2 None
SRR1173175 Pre-XDR-TB lineage2.2.2 None
SRR1173305 Pre-XDR-TB lineage2.2.2 None
SRR13870429 Pre-XDR-TB lineage4.1.2.1 None
SRR11871429 Pre-XDR-TB lineage2.2.1 None
SRR13870410 Pre-XDR-TB lineage4.3.3 None
SRR11871424 Pre-XDR-TB lineage2.2.1 None
SRR11871437 Pre-XDR-TB lineage2.2.1 None
SRR13120434 Pre-XDR-TB lineage2.2.1 None
SRR13232439 Pre-XDR-TB lineage2.2.1 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR16089539 Pre-XDR-TB lineage4.1.1.3 None
SRR15315955 Pre-XDR-TB lineage4.5 None
SRR14801530 Pre-XDR-TB lineage4.2.1 None
SRR14807642 Pre-XDR-TB lineage2.2.1 None
SRR18715420 Pre-XDR-TB lineage2.2.1 None
SRR16097557 Other lineage4.5 None
ERR11082007 Pre-XDR-TB lineage2.2.1 None
SRR18911240 Other lineage4.1.2.1 None
SRR2100527 Other lineage3.1.2 None
SRR21276923 Pre-XDR-TB lineage4.5 None
SRR22424791 Pre-XDR-TB lineage1.1.2 None
SRR22424762 Pre-XDR-TB lineage2.2.1.1 None
SRR23938609 Pre-XDR-TB lineage2.2.1 None
SRR23861993 Pre-XDR-TB lineage2.2.1 None
ERR8025659 Pre-XDR-TB lineage2.2.2 None
ERR8025533 Pre-XDR-TB lineage2.2.2 None
ERR8025460 Pre-XDR-TB lineage4.3.2.1;lineage2.2.2 None
ERR9806866 Pre-XDR-TB lineage4.1.1.3 None
ERR8025711 Pre-XDR-TB lineage4.1.1.3 None
ERR10112847 XDR-TB lineage2.2.1 None
ERR9807004 Pre-XDR-TB lineage4.1.1.3 None
ERR9806814 Pre-XDR-TB lineage2.2.2 None
ERR8025476 Pre-XDR-TB lineage2.2.2 None
ERR8025430 Pre-XDR-TB lineage2.2.2 None
ERR8025694 Pre-XDR-TB lineage2.2.2 None
ERR8025620 Pre-XDR-TB lineage2.2.2 None
ERR8025587 Pre-XDR-TB lineage2.2.2 None
ERR8025745 Pre-XDR-TB lineage2.2.2 None
ERR10610127 Pre-XDR-TB lineage2.2.2 None
ERR5758373 Pre-XDR-TB lineage2.2.2 None
ERR5758350 Pre-XDR-TB lineage2.2.2 None
ERR5758428 Pre-XDR-TB lineage2.2.2 None
ERR4813848 Pre-XDR-TB lineage4.4.1.1 None
ERR5758434 Pre-XDR-TB lineage2.2.2 None
ERR4813050 Pre-XDR-TB lineage4.3.3 None
ERR1873429 Pre-XDR-TB lineage2.2.2 za
ERR2513126 Pre-XDR-TB lineage4.3.3 gb
ERR1873490 Pre-XDR-TB lineage2.2.2 za
ERR1873564 Pre-XDR-TB lineage2.2.2 za
ERR4814715 Other lineage3 gb
ERR4813106 Pre-XDR-TB lineage4.1.1 None
ERR4813087 Pre-XDR-TB lineage4.3.3 pe
SAMN02403485 Pre-XDR-TB lineage2.2.2 za
ERR4813348 Pre-XDR-TB lineage4.3.3 None
SRR6045972 Pre-XDR-TB lineage4.3.3 gb
ERR228170 Other lineage3.1.2 None
ERR8665834 Pre-XDR-TB lineage4.3.3 None
SAMN02419670 Pre-XDR-TB lineage4.3.3;lineage2.2.1 by
ERR2510647 Pre-XDR-TB lineage3 pk
SAMN02403442 Pre-XDR-TB lineage2.2.2 za
ERR2516750 Pre-XDR-TB lineage3 gb
ERR2516947 Pre-XDR-TB lineage3 gb
ERR2517052 Pre-XDR-TB lineage2.2.1 gb
SRR5153317 Pre-XDR-TB lineage2.2.1 None
ERR2516491 Pre-XDR-TB lineage4.3.4.2 pe
ERR2513819 Pre-XDR-TB lineage4.3.3 gb
SRR23340088 Pre-XDR-TB lineage2.2 None
ERR2516856 Pre-XDR-TB lineage2.2.1 gb
SRR23310932 XDR-TB lineage4.2.1 None
SAMN02350479 Pre-XDR-TB lineage4.4.1.1.1 za
ERR502924 Other lineage2.2.1 None
ERR4822340 Pre-XDR-TB lineage4.8 de
ERR4830778 Pre-XDR-TB lineage4.5 None
ERR1873551 Pre-XDR-TB lineage2.2.2 za
SRR6930934 Pre-XDR-TB lineage4.1 None
ERR2984792 Pre-XDR-TB lineage4.3.4.1 None
SAMN02403479 Pre-XDR-TB lineage2.2.2 za
ERR4830762 Pre-XDR-TB lineage4.5 ir
ERR4831488 Pre-XDR-TB lineage3 None
SAMN02403451 Pre-XDR-TB lineage2.2.2 za
SRR6930923 Pre-XDR-TB lineage1.2.2.2 None
SRR8186766 Pre-XDR-TB lineage2.2.1 None
SRR9224939 Pre-XDR-TB lineage4.3.2 None
SRR7516319 Pre-XDR-TB lineage2.2.1 None
SRR8186781 Pre-XDR-TB lineage2.2.1 None
SRR8186776 Pre-XDR-TB lineage2.2.1 None
SRR8186775 Pre-XDR-TB lineage2.2.1 None
SRR8791314 Pre-XDR-TB lineage4.2 None
SRR8791313 Pre-XDR-TB lineage4.2.1 None
ERR10748257 Pre-XDR-TB lineage2.2.2 None
SRR8791340 Pre-XDR-TB lineage4.2.1 None
ERR10748256 Pre-XDR-TB lineage2.2.2 None
DRR130207 Pre-XDR-TB lineage2.2.1 None
ERR067761 Pre-XDR-TB lineage2.2.1 ru
ERR10748484 Pre-XDR-TB lineage2.2.1.1 None
ERR4011101 Other lineage2.2.1.1 None
ERR133848 Pre-XDR-TB lineage2.2.1 ru
ERR3287582 Pre-XDR-TB lineage4.3.3 None
ERR3335786 Pre-XDR-TB lineage3 pk
ERR4011102 Other lineage2.2.1.1 None
ERR10762342 Pre-XDR-TB lineage4.2.1;lineage2.2.1 None
ERR11043211 Pre-XDR-TB lineage2.2.1 None
ERR4553494 Pre-XDR-TB None
ERR4011108 Other lineage2.2.1.1 None
ERR4011122 Pre-XDR-TB lineage2.2.2 None
ERR4797175 Pre-XDR-TB lineage4.3.3 in
ERR4553590 Pre-XDR-TB None
ERR4796521 Pre-XDR-TB lineage2.2.1.1 in
ERR4796898 Pre-XDR-TB lineage2.2.1 in
ERR4798507 Pre-XDR-TB lineage4.3.3 in
ERR4798186 Pre-XDR-TB lineage4.3.3 in
ERR4798352 Pre-XDR-TB lineage2.2.1.2 in
ERR5863866 Pre-XDR-TB lineage2.2.1 None
ERR4799983 Pre-XDR-TB lineage4;lineage3.1.2 None
ERR4800348 Pre-XDR-TB lineage4.3.3 in
ERR4800545 Other lineage3 in
ERR4809074 Pre-XDR-TB lineage2.2.2 za
ERR5863865 Pre-XDR-TB lineage2.2.1 None
ERR4798945 Pre-XDR-TB lineage3 in
ERR4800556 Pre-XDR-TB lineage2.2.1 in
ERR4809076 Pre-XDR-TB lineage2.2.2 za
ERR4810925 Pre-XDR-TB lineage4 cn
ERR4812196 Pre-XDR-TB lineage4.3.3 pe
ERR5863878 Pre-XDR-TB lineage2.2.1 None
ERR5864453 Pre-XDR-TB lineage2.2.1 None
ERR5864455 Pre-XDR-TB lineage2.2.1 None
ERR5864456 Pre-XDR-TB lineage2.2.1 None
ERR5864452 Pre-XDR-TB lineage2.2.1 None
ERR5864457 Pre-XDR-TB lineage2.2.1 None
ERR5864459 Pre-XDR-TB lineage2.2.1 None
ERR5864460 Pre-XDR-TB lineage2.2.1 None
ERR5864454 Pre-XDR-TB lineage2.2.1 None
ERR5864458 Pre-XDR-TB lineage2.2.1 None
ERR5866044 Pre-XDR-TB lineage2.2.1 None
ERR5866045 Pre-XDR-TB lineage2.2.1 None
ERR5866498 Pre-XDR-TB lineage2.2.1 None
ERR5866497 Pre-XDR-TB lineage2.2.1 None
ERR5897089 Pre-XDR-TB lineage3 None
ERR5987219 Pre-XDR-TB lineage2.2.2 None
ERR5917999 Pre-XDR-TB lineage2.2.2 za
ERR5918002 Pre-XDR-TB lineage2.2.2 za
ERR7361979 Pre-XDR-TB lineage2.2.2 None
ERR7911368 Pre-XDR-TB lineage4.3.3 pe
ERR7902741 Other lineage1.2.1.2.1 None
ERR7911192 Pre-XDR-TB lineage4.3.3 za
ERR7911632 Pre-XDR-TB lineage2.2.2 za
ERR7911554 Pre-XDR-TB lineage2.2.2 za
ERR7911602 Pre-XDR-TB lineage2.2.2 za
ERR7911622 Pre-XDR-TB lineage2.2.2 None
ERR7911559 Pre-XDR-TB lineage2.2.2 za
ERR7911600 Pre-XDR-TB lineage2.2.2 za
ERR8975659 Pre-XDR-TB lineage2.2.2 None
ERR8665992 Pre-XDR-TB lineage2.2.1 None
ERR8665626 Pre-XDR-TB lineage4.3.3 None
ERR8665765 Pre-XDR-TB lineage2.2.1 None
ERR8665764 Pre-XDR-TB lineage2.2.1 None
ERR8975713 Pre-XDR-TB lineage2.2.1 None
ERR8975803 Pre-XDR-TB lineage2.2.1 None
ERR9993154 Pre-XDR-TB lineage3.1.1 None
ERR9993009 Pre-XDR-TB lineage4.1.1.3 None
ERR9992654 Pre-XDR-TB lineage4.3.3 None
ERR9993162 Pre-XDR-TB lineage2.2.2 None
ERR9993133 Pre-XDR-TB lineage4.3.3 None
ERR9993119 Pre-XDR-TB lineage4.3.3 None
ERR9993239 Pre-XDR-TB lineage2.2.2 None
ERR9993178 Pre-XDR-TB lineage2.2.2 None
ERR9993180 Pre-XDR-TB lineage2.2.2 None
SRR1019141 Pre-XDR-TB lineage4.4.1.1 None
SRR10379916 Pre-XDR-TB lineage4.2.1 None
SRR10397155 Pre-XDR-TB lineage2.2.1 None
SRR10869291 Pre-XDR-TB lineage2.2.2 None
SRR10869097 Pre-XDR-TB lineage2.2.2 None
SRR10869262 Pre-XDR-TB lineage2.2.2 None
SRR10397164 Pre-XDR-TB lineage2.2.1 None
SRR10869206 Pre-XDR-TB lineage4.3.2.1;lineage2.2.2 None