Rv0407 - c.552C>T
Drug resistance types
70 Sensitive
0 RR-TB
12 HR-TB
14 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3 | 92 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage1.1.3;lineage2.2.1 | 1 |
| lineage1.1.3;lineage1.2.2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage3 | 1 |
| lineage2.2 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.9 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 104 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR28868526 | Sensitive | lineage1.1.3 | None |
| SRR27450338 | Sensitive | lineage1.1.3 | None |
| SRR29772761 | MDR-TB | lineage1.1.3 | None |
| SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None |
| ERR2517477 | Sensitive | lineage1.1.3 | nl |
| SRR21732382 | HR-TB | lineage1.1.3 | None |
| SRR25827494 | Sensitive | lineage1.1.3 | None |
| SRR22251817 | Sensitive | lineage1.1.3 | None |
| SRR17856670 | Sensitive | lineage1.1.3 | None |
| ERR4797700 | Pre-XDR-TB | lineage1.1.3;lineage2.2.1 | in |
| SRR7898223 | MDR-TB | lineage1.1.3 | in |
| ERR4796606 | Sensitive | lineage1.1.3 | in |
| SAMN02599157 | Sensitive | lineage1.1.3 | in |
| ERR4796582 | Sensitive | lineage1.1.3 | in |
| ERR2513092 | Sensitive | lineage1.1.3 | None |
| SRR29050765 | HR-TB | lineage1.1.3 | None |
| ERR3275469 | Sensitive | lineage1.1.3 | nl |
| SRR10828628 | MDR-TB | lineage1.1.3 | None |
| ERR13289718 | Sensitive | lineage1.1.3 | None |
| SRR29772424 | MDR-TB | lineage1.1.3 | None |
| ERR752184 | Sensitive | lineage1.1.3;lineage1.2.2.2 | th |
| SRR16058378 | Sensitive | lineage1.1.3 | None |
| ERR752291 | Sensitive | lineage1.1.3 | th |
| ERR718494 | Sensitive | lineage1.1.3 | th |
| ERR768024 | Sensitive | lineage1.1.3 | th |
| ERR718265 | Sensitive | lineage1.1.3 | th |
| SRR26159058 | Sensitive | lineage1.1.3 | None |
| ERR775768 | Sensitive | lineage1.1.3 | th |
| SRR28045644 | Sensitive | lineage1.1.3 | None |
| ERR751961 | Sensitive | lineage1.1.3 | th |
| ERR752124 | Sensitive | lineage1.1.3 | th |
| SRR8380877 | Sensitive | lineage1.1.3 | in |
| ERR4820104 | Sensitive | lineage1.1.3 | None |
| SRR11662423 | MDR-TB | lineage1.1.3 | None |
| ERR11067247 | Sensitive | lineage1.1.3 | None |
| SRR19318151 | HR-TB | lineage1.1.3 | None |
| SRR28044851 | Sensitive | lineage1.1.3 | None |
| ERR9125655 | Sensitive | lineage1.1.3 | None |
| ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| DRR474150 | Other | lineage1.1.3 | None |
| SRR6046577 | Other | lineage4.6.3;lineage4.9 | None |
| SRR11972442 | MDR-TB | lineage1.1.3 | None |
| SRR1173036 | Sensitive | lineage1.1.3 | None |
| ERR2514775 | Sensitive | lineage1.1.3 | None |
| SRR6045556 | Sensitive | lineage1.1.3 | gb |
| SRR30182383 | Other | lineage1.1.3 | None |
| SRR30182554 | Sensitive | lineage1.1.3 | None |
| ERR2512534 | Sensitive | lineage1.1.3 | gb |
| SRR29231207 | HR-TB | lineage1.1.3 | None |
| SRR5341311 | Pre-XDR-TB | lineage3 | in |
| SRR5709782 | MDR-TB | lineage1.1.3 | th |
| SRR29772517 | MDR-TB | lineage1.1.3 | None |
| SRR12882101 | HR-TB | lineage1.1.3 | None |
| SRR26159059 | Sensitive | lineage1.1.3 | None |
| SRR21689496 | Sensitive | lineage1.1.3 | None |
| SRR21733384 | Sensitive | lineage1.1.3 | None |
| ERR4799513 | HR-TB | lineage2.2 | None |
| SRR11972439 | MDR-TB | lineage1.1.3 | None |
| ERR13261313 | Sensitive | lineage1.1.3 | None |
| SRR15014684 | Sensitive | lineage1.1.3 | None |
| ERR752134 | Sensitive | lineage1.1.3 | th |
| ERR718404 | Sensitive | lineage1.1.3 | th |
| ERR752094 | Sensitive | lineage1.1.3 | th |
| ERR752158 | Sensitive | lineage1.1.3 | th |
| ERR751986 | Sensitive | lineage1.1.3 | th |
| ERR4799750 | Sensitive | lineage1.1.3 | in |
| ERR4799954 | Sensitive | lineage1.1.3 | in |
| ERR2446094 | Sensitive | lineage1.1.3 | nl |
| ERR4798474 | Sensitive | lineage1.1.3 | in |
| ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None |
| SRR1172914 | Sensitive | lineage1.1.3 | None |
| SRR21732051 | Sensitive | lineage1.1.3 | None |
| SRR11662704 | MDR-TB | lineage1.1.3 | None |
| SRR25340981 | Sensitive | lineage1.1.3 | None |
| ERR9901059 | Sensitive | lineage1.1.3 | None |
| SRR21690349 | Sensitive | lineage1.1.3 | None |
| SRR1172752 | Sensitive | lineage1.1.3 | None |
| ERR7902632 | Sensitive | lineage1.1.3 | None |
| SRR28044568 | Sensitive | lineage1.1.3 | None |
| ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
| SRR25340887 | Sensitive | lineage1.1.3 | None |
| ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| SRR22251785 | Sensitive | lineage1.1.3 | None |
| SRR28044579 | Sensitive | lineage1.1.3 | None |
| SRR1172709 | Sensitive | lineage1.1.3 | None |
| SRR28868673 | Other | lineage1.1.3 | None |
| ERR4799511 | Sensitive | lineage1.1.3 | in |
| SRR29772589 | MDR-TB | lineage1.1.3 | None |
| ERR4816246 | Sensitive | lineage1.1.3 | gb |
| ERR4828178 | HR-TB | lineage1.1.3 | vn |
| SRR29053566 | HR-TB | lineage1.1.3 | None |
| SAMN02599161 | Sensitive | lineage1.1.3 | None |
| SRR29772497 | MDR-TB | lineage1.1.3 | None |
| SRR5341456 | Other | lineage4.9 | None |
| SRR28046092 | Sensitive | lineage1.1.3 | None |
| SRR28044548 | Sensitive | lineage1.1.3 | None |
| ERR718550 | Sensitive | lineage1.1.3 | th |
| SRR28044572 | Sensitive | lineage1.1.3 | None |
| SRR28045998 | Sensitive | lineage1.1.3 | None |
| ERR11067264 | Sensitive | lineage1.1.3 | None |
| SRR10808730 | Other | lineage4.9 | None |
| SRR28045056 | Sensitive | lineage1.1.3 | None |
| SRR15014611 | MDR-TB | lineage1.1.3 | None |
| SRR28045628 | Sensitive | lineage1.1.3 | None |
