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SRA data
Rv0407
- c.552C>T
Drug resistance types
70 Sensitive
1 RR-TB
12 HR-TB
13 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
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lineage
Count
lineage
Count
lineage1.1.3
92
lineage4.9
2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
lineage2.2.1.2;lineage7
1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
1
lineage2.2
1
lineage1.1.3;lineage1.2.2.2
1
La1.7;M.canetti;lineage4.9
1
lineage3
1
lineage1.1.3;lineage2.2.1
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
104
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR474150
Other
lineage1.1.3
None
ERR11067247
Sensitive
lineage1.1.3
None
ERR11067264
Sensitive
lineage1.1.3
None
ERR13261313
Sensitive
lineage1.1.3
None
ERR13289718
Sensitive
lineage1.1.3
None
ERR2026695
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
None
ERR2026697
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2026698
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2446094
Sensitive
lineage1.1.3
nl
ERR2512534
Sensitive
lineage1.1.3
gb
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