Rv0407 - c.838_840delATCinsGG


Drug resistance types
0 Sensitive 3 RR-TB 31 HR-TB 61 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 14 Other
lineage Counts
lineage Count
M.canetti;lineage2.1;lineage4.9 11
lineage4.9 31
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage4.9;lineage9 1
lineage2.2.1 3
lineage2.1;lineage2.2;lineage6.3 1
lineage2.1;lineage4.9 3
La3;M.canetti;lineage2.1;lineage3.1 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9 11
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage1 1
lineage4.3.2.1 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
lineage2.2.1.1 1
La3;lineage4.9 3
M.canetti;lineage2.1;lineage3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage4 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.1;lineage4.3.2 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.3.4.2.1 1
lineage2.1;lineage4.9;lineage6.3 1
lineage4.8;lineage4.9 2
lineage2.1;lineage4.9;lineage6.3;lineage8 1
La1.6;lineage4 1
lineage2.2 1
La3;lineage2.1;lineage4.9 1
lineage4.1.2 1
La3;M.canetti;lineage4.9 1
lineage4.1.2.1 2
spoligotype Counts
spoligotype Count
None 110
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR736856 HR-TB lineage4.9 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR4798099 HR-TB lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323066 HR-TB lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR15014655 Other M.canetti;lineage1 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR1180996 Other lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR1165628 Other La3;lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR502511 HR-TB lineage4.9 None
ERR234659 HR-TB None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4797474 Other lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR702405 HR-TB lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR6866639 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR7535082 Other lineage4.9 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR5341300 HR-TB lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR124636 HR-TB lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341461 HR-TB lineage4.9 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR5341453 Other lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675246 Other lineage4.9 None
ERR473332 Other lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4797184 HR-TB lineage4.9 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR502510 HR-TB lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1063896 HR-TB None
SRR28351554 Other La1.6;lineage4 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR5341384 HR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR1166821 RR-TB lineage4.1.2.1 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR3675235 HR-TB lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4796254 Other lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None