Rv0565c - c.630G>A
Drug resistance types
44 Sensitive
3 RR-TB
23 HR-TB
16 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 54 |
| lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 9 |
| M.canetti;lineage4.3.1;lineage4.9 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 3 |
| La3;M.canetti;lineage2.1;lineage4.9 | 4 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage4 | 1 |
| lineage2.1;lineage4.3.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| lineage2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1159158 | Other | lineage2.2.1 | None | SRR1163171 | Sensitive | lineage2.2.1 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR13276002 | Sensitive | lineage2.2.1 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9119138 | RR-TB | M.canetti;lineage4.3.1;lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR5917698 | Sensitive | lineage2.2.1 | by | SRR28858712 | Other | lineage2.2.1 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1159237 | Sensitive | lineage2.2.1 | None | SRR6832249 | Sensitive | lineage2.2.1 | None | ERR13273357 | Sensitive | lineage2.2.1 | None | ERR13273331 | Sensitive | lineage2.2.1 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1163127 | Sensitive | lineage2.2.1 | None | SRR1169008 | Sensitive | lineage2.2.1 | None | SRR6484830 | Sensitive | lineage2.2.1 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR13273303 | Sensitive | lineage2.2.1 | None | SRR16088179 | Sensitive | lineage2.2.1 | None | ERR4132438 | Sensitive | lineage2.2.1 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None | SRR1163421 | Sensitive | lineage2.2.1 | None | SRR3675506 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR1180982 | Other | lineage2.2.1 | None | SRR1172328 | Sensitive | lineage2.2.1 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SAMN02419540 | Other | lineage2.2.1 | None | SAMN02419598 | Sensitive | lineage2.2.1 | by | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR1172423 | Sensitive | lineage2.2.1 | None | SRR28240111 | Sensitive | lineage2.2.1 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | SRR6785334 | Sensitive | lineage2.2.1 | None | SRR1162495 | Sensitive | lineage2.2.1 | None | SRR18715455 | Sensitive | lineage2.2.1 | None | SRR6785195 | Sensitive | lineage2.2.1 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1168996 | Sensitive | lineage2.2.1 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SAMN02419630 | Sensitive | lineage2.2.1 | by | SRR6831840 | Sensitive | lineage2.2.1 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR323038 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1184001 | Sensitive | lineage2.2.1 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SAMN02419646 | Sensitive | lineage2.2.1 | by | SRR6484916 | Sensitive | lineage2.2.1 | None | SRR6785227 | Other | lineage2.2.1 | None | SRR24673501 | Sensitive | lineage2.2.1 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR16088287 | Sensitive | lineage2.2.1 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1163368 | Sensitive | lineage2.2.1 | None | SRR1162501 | Other | lineage2.2.1 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR5152940 | Pre-XDR-TB | lineage2.2.1 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR5917770 | Sensitive | lineage2.2.1 | by | SRR1163365 | Sensitive | lineage2.2.1 | None | SRR1180983 | Sensitive | lineage2.2.1 | None | ERR2229143 | RR-TB | lineage4.9 | None | SRR3675515 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR13276046 | Sensitive | lineage2.2.1 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR13273330 | Sensitive | lineage2.2.1 | None | SRR1172314 | Sensitive | lineage2.2.1 | None | SRR1183958 | Other | lineage2.2.1 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1169068 | Sensitive | lineage2.2.1 | None | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR5311098 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6458400 | Sensitive | lineage2.2.1 | None | SRR28240053 | Sensitive | lineage2.2.1 | None | SAMN02419620 | Sensitive | lineage2.2.1 | by | SRR1163411 | Sensitive | lineage2.2.1 | None | ERR9119667 | Sensitive | lineage2.2.1 | None | ERR5917708 | Sensitive | lineage2.2.1 | by | SRR28239702 | Other | lineage2.2.1 | None | SRR6484966 | Other | lineage2.2.1 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR5311083 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None |
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