lineage | Count |
---|---|
lineage3 | 1 |
lineage4.6.5 | 25 |
La1.7;lineage4.9 | 1 |
lineage3.1.1 | 1 |
M.canetti;lineage4.9;lineage9 | 1 |
lineage2.2.1 | 2 |
lineage2.1;lineage4.9 | 1 |
lineage4.8 | 3 |
lineage4.9 | 3 |
La3;lineage4.9 | 1 |
La1.7.X-unk4;lineage4.9 | 1 |
lineage6.1.1 | 2 |
lineage2.1;lineage4.9;lineage7 | 1 |
lineage4.2;lineage4.6.3;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 44 |
ID | Drug resistance | Lineage | Country iso2 | SRR19304040 | Sensitive | lineage3 | None | ERR1679638 | Pre-XDR-TB | lineage4.6.5 | ng | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR11444328 | Other | lineage4.6.5 | None | ERR11067236 | Other | lineage4.6.5 | None | ERR4820621 | HR-TB | lineage3.1.1 | gb | SRR6045507 | Other | lineage4.6.5 | gb | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR5074114 | HR-TB | lineage2.2.1 | vn | ERR11044236 | Pre-XDR-TB | lineage4.6.5 | None | ERR13290068 | Other | lineage4.6.5 | None | SRR11444371 | Other | lineage4.6.5 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR9901110 | Other | lineage4.6.5 | None | ERR4831471 | Pre-XDR-TB | lineage4.8 | pk | ERR971389 | Sensitive | lineage4.9 | None | SRR21689993 | HR-TB | lineage4.6.5 | None | SRR11444115 | Other | lineage4.6.5 | None | SRR11444123 | Other | lineage4.6.5 | None | SRR11444167 | HR-TB | lineage4.6.5 | None | ERR2516269 | Other | lineage4.6.5 | be | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR4831714 | HR-TB | lineage2.2.1 | vn | ERR387051 | Other | lineage4.9 | None | ERR2514219 | Other | lineage4.6.5 | gb | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR1577831 | MDR-TB | lineage6.1.1 | None | ERR161037 | Other | lineage4.9 | None | SRR21689961 | Other | lineage4.6.5 | None | ERR4831473 | MDR-TB | lineage4.8 | None | SRR11444333 | Other | lineage4.6.5 | None | SRR11461701 | Other | lineage4.6.5 | None | ERR4831465 | Pre-XDR-TB | lineage4.8 | None | ERR11082471 | Other | lineage4.6.5 | None | SRR11444330 | Other | lineage4.6.5 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR26112497 | Other | lineage4.6.5 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR7070137 | Other | lineage4.6.5 | None | ERR11050626 | HR-TB | lineage4.6.5 | None | SRR1577820 | MDR-TB | lineage6.1.1 | None | SRR11444277 | Other | lineage4.6.5 | None | ERR4822488 | Other | lineage4.6.5 | de | ERR4821183 | Other | lineage4.6.5 | gb |
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