lineage | Count |
---|---|
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
lineage4.2;lineage4.9 | 3 |
La1.7;lineage3.1;lineage4 | 1 |
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
lineage4.9 | 4 |
lineage2.2.1.1 | 4 |
lineage4.2;lineage4.8.1;lineage4.9 | 2 |
lineage2.2.1 | 4 |
La3;lineage4.9 | 1 |
M.canetti;lineage4.2;lineage4.9 | 1 |
lineage4.9;lineage6.3 | 1 |
La1.7;lineage4.9 | 1 |
M.canetti;lineage2.2 | 2 |
M.canetti;lineage2.2.2;lineage6.2 | 2 |
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
spoligotype | Count |
---|---|
None | 29 |
ID | Drug resistance | Lineage | Country iso2 | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR3797063 | Other | La3;lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None |
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