lineage | Count |
---|---|
lineage2.2.1 | 54 |
lineage4.3.3 | 21 |
lineage4.3.4.2 | 65 |
lineage4.3.4 | 1 |
lineage4.3.4.1 | 4 |
lineage3 | 1 |
lineage2.2.1.1 | 2 |
lineage4.4.1.1 | 1 |
lineage4.3.1 | 1 |
lineage4.1.2.1 | 1 |
lineage4.6.1.2 | 1 |
lineage2.2.1;lineage1.2.1.2 | 1 |
spoligotype | Count |
---|---|
None | 153 |
ID | Drug resistance | Lineage | Country iso2 | SRR6824530 | Pre-XDR-TB | lineage2.2.1 | cn | SRR5709952 | MDR-TB | lineage2.2.1 | th | ERR4813070 | MDR-TB | lineage4.3.3 | pe | SAMEA2534597 | MDR-TB | lineage2.2.1 | uz | ERR1034844 | MDR-TB | lineage4.3.4.2 | pt | ERR10969172 | MDR-TB | lineage4.3.4 | None | SRR2024958 | MDR-TB | lineage2.2.1 | cn | ERR275214 | Pre-XDR-TB | lineage4.3.4.1 | pt | ERR2864284 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR2864250 | MDR-TB | lineage4.3.4.2 | pt | SAMN03246565 | Pre-XDR-TB | lineage2.2.1 | cn | ERR1035220 | MDR-TB | lineage4.3.4.2 | pt | ERR1035318 | Pre-XDR-TB | lineage4.3.4.1 | br | SRR7585398 | Pre-XDR-TB | lineage3 | in | ERR2516687 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR4830149 | MDR-TB | lineage2.2.1 | None | SRR6824580 | Pre-XDR-TB | lineage2.2.1 | cn | SRR5709879 | MDR-TB | lineage2.2.1 | th | ERR1034879 | MDR-TB | lineage4.3.4.2 | pt | ERR1035203 | MDR-TB | lineage4.3.4.2 | pt | ERR8699107 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810975 | MDR-TB | lineage2.2.1 | cn | SRR5709809 | MDR-TB | lineage2.2.1 | th | ERR1034907 | Pre-XDR-TB | lineage4.3.4.1 | pt | ERR1213902 | MDR-TB | lineage4.3.3 | pe | SRR5709811 | MDR-TB | lineage2.2.1 | th | SRR5710007 | MDR-TB | lineage2.2.1 | th | ERR1034894 | MDR-TB | lineage4.3.4.2 | pt | ERR4813347 | MDR-TB | lineage4.3.3 | None | ERR8976110 | MDR-TB | lineage2.2.1.1 | None | ERR8975885 | MDR-TB | lineage2.2.1.1 | None | SRR7517777 | MDR-TB | lineage2.2.1 | th | ERR1034835 | MDR-TB | lineage4.3.4.2 | pt | ERR1035244 | MDR-TB | lineage4.3.4.2 | pt | ERR275229 | MDR-TB | lineage4.3.4.2 | pt | ERR4812925 | MDR-TB | lineage4.3.3 | pe | ERR8975852 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA2534181 | MDR-TB | lineage2.2.1 | uz | ERR4830063 | MDR-TB | lineage2.2.1 | None | SRR1723847 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2510195 | MDR-TB | lineage4.3.4.2 | pe | ERR5917991 | MDR-TB | lineage2.2.1 | za | ERR775340 | MDR-TB | lineage4.3.4.2 | pe | ERR1035194 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR275217 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR158581 | MDR-TB | lineage2.2.1 | ru | ERR3287612 | MDR-TB | lineage4.3.3 | pe | ERR3287569 | MDR-TB | lineage4.3.3 | None | ERR1034895 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR502893 | Pre-XDR-TB | lineage2.2.1 | None | ERR1036282 | MDR-TB | lineage4.3.4.2 | pt | ERR7911729 | MDR-TB | lineage2.2.1 | us | SRR5709844 | MDR-TB | lineage2.2.1 | th | ERR4812897 | MDR-TB | lineage4.3.3 | pe | ERR2864297 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR2864269 | MDR-TB | lineage4.3.4.2 | pt | ERR275212 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR5709769 | MDR-TB | lineage2.2.1 | th | SRR5709754 | Pre-XDR-TB | lineage2.2.1 | th | ERR1034909 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1036284 | MDR-TB | lineage4.3.4.2 | pt | SRR1723544 | MDR-TB | lineage2.2.1 | cn | ERR4829752 | Pre-XDR-TB | lineage4.4.1.1 | it | ERR2516682 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR7911721 | MDR-TB | lineage2.2.1 | us | SRR5709753 | MDR-TB | lineage2.2.1 | th | SRR6824471 | Pre-XDR-TB | lineage2.2.1 | cn | ERR1035221 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR7911371 | MDR-TB | lineage4.3.3 | pe | ERR2864271 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR2510136 | MDR-TB | lineage4.3.3 | pe | ERR275227 | MDR-TB | lineage4.3.4.2 | pt | ERR2864283 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR2864288 | MDR-TB | lineage4.3.4.2 | pt | ERR275207 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR775326 | MDR-TB | lineage4.3.3 | pe | SRR5709951 | MDR-TB | lineage2.2.1 | th | SRR5709775 | MDR-TB | lineage2.2.1 | th | ERR1035186 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR8699850 | MDR-TB | lineage2.2.1 | None | ERR4812902 | MDR-TB | lineage4.3.3 | pe | ERR4812946 | MDR-TB | lineage4.3.3 | pe | ERR1035187 | MDR-TB | lineage4.3.4.2 | pt | ERR1036285 | MDR-TB | lineage4.3.4.2 | pt | ERR1035243 | MDR-TB | lineage4.3.4.2 | pt | ERR275219 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR275221 | MDR-TB | lineage4.3.4.2 | pt | ERR1034823 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR5709930 | MDR-TB | lineage2.2.1 | th | ERR1034896 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035237 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1034873 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1034821 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR5709807 | MDR-TB | lineage2.2.1 | th | ERR3014602 | Pre-XDR-TB | lineage4.3.1 | None | ERR4813291 | MDR-TB | lineage4.3.4.2 | pe | ERR4819652 | Sensitive | lineage4.1.2.1 | None | SRR1723846 | Pre-XDR-TB | lineage2.2.1 | cn | ERR275224 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1034845 | MDR-TB | lineage4.3.4.2 | pt | ERR6358711 | MDR-TB | lineage4.6.1.2 | None | SRR5837706 | MDR-TB | lineage2.2.1 | th | ERR1035176 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1034855 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR4812581 | MDR-TB | lineage4.3.3 | pe | SAMEA2533453 | MDR-TB | lineage2.2.1 | uz | SRR5709817 | MDR-TB | lineage2.2.1 | th | SRR5709843 | Pre-XDR-TB | lineage2.2.1 | th | ERR4813091 | MDR-TB | lineage4.3.3 | pe | ERR4812516 | MDR-TB | lineage4.3.3 | pe | ERR1034886 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR5709818 | MDR-TB | lineage2.2.1;lineage1.2.1.2 | th | ERR2864253 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR2041787 | MDR-TB | lineage2.2.1 | rs | ERR4813002 | MDR-TB | lineage4.3.3 | None | SRR6824527 | Pre-XDR-TB | lineage2.2.1 | cn | ERR7911718 | MDR-TB | lineage2.2.1 | us | ERR1035233 | Pre-XDR-TB | lineage4.3.4.1 | pt | ERR4812143 | MDR-TB | lineage4.3.3 | pe | ERR2516554 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR7911714 | MDR-TB | lineage2.2.1 | us | SRR5709965 | MDR-TB | lineage2.2.1 | th | ERR3287312 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR2864225 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR7911399 | MDR-TB | lineage2.2.1 | us | SRR5709961 | MDR-TB | lineage2.2.1 | th | ERR7911746 | MDR-TB | lineage2.2.1 | us | SRR2024899 | Pre-XDR-TB | lineage2.2.1 | cn | ERR275222 | MDR-TB | lineage4.3.4.2 | pt | ERR751593 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR2864289 | MDR-TB | lineage4.3.4.2 | pt | SRR1723843 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035225 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035234 | MDR-TB | lineage4.3.4.2 | pt | ERR2707021 | MDR-TB | lineage4.3.4.2 | cd | ERR1035228 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR5709867 | Pre-XDR-TB | lineage2.2.1 | th | ERR2864240 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR5709877 | MDR-TB | lineage2.2.1 | th | SRR5709812 | MDR-TB | lineage2.2.1 | th | ERR1035247 | MDR-TB | lineage4.3.4.2 | pt | ERR1036293 | MDR-TB | lineage4.3.4.2 | pt | ERR2864264 | MDR-TB | lineage4.3.4.2 | pt | SRR6257108 | MDR-TB | lineage2.2.1 | None | ERR3287430 | MDR-TB | lineage4.3.3 | pe | ERR2864241 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR4812829 | MDR-TB | lineage4.3.3 | None | ERR2516823 | MDR-TB | lineage2.2.1 | gb | ERR4812849 | MDR-TB | lineage4.3.3 | pe | ERR275184 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1036291 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR4828878 | MDR-TB | lineage4.3.3 | None |
---|