lineage | Count |
---|---|
lineage4.3.3 | 23 |
lineage2.2.1 | 38 |
lineage3 | 1 |
lineage4.4.1.1.1 | 10 |
lineage2.2.1;lineage4.8 | 1 |
lineage4.5 | 4 |
lineage4.3.4.1 | 4 |
lineage1.2.2.2 | 3 |
lineage4.2.1 | 4 |
lineage3.1.2 | 1 |
lineage2.2.1;lineage4.3.3 | 1 |
lineage4.1.2.1 | 1 |
lineage2.2.1.1 | 1 |
lineage3.1.1;lineage4.3.3 | 1 |
lineage3.1.1 | 1 |
lineage4.6.2.2 | 2 |
lineage2.2.1;lineage4.1 | 1 |
lineage2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 98 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR2707219 | MDR-TB | lineage4.3.3 | cd |
ERR2707100 | MDR-TB | lineage4.3.3 | cd |
ERR2706938 | MDR-TB | lineage4.3.3 | cd |
ERR2707221 | MDR-TB | lineage4.3.3 | cd |
ERR2707098 | MDR-TB | lineage4.3.3 | cd |
ERR2707173 | MDR-TB | lineage4.3.3 | cd |
ERR2707007 | MDR-TB | lineage4.3.3 | cd |
ERR2041932 | MDR-TB | lineage2.2.1 | None |
SRR29230998 | MDR-TB | lineage4.3.3 | None |
SRR25206916 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2041931 | MDR-TB | lineage2.2.1 | None |
SRR28351325 | MDR-TB | lineage3 | None |
SRR29231700 | MDR-TB | lineage4.3.3 | None |
SAMN02403520 | MDR-TB | lineage4.4.1.1.1 | za |
SRR12062532 | Pre-XDR-TB | lineage2.2.1 | None |
SRR12062534 | Pre-XDR-TB | lineage2.2.1 | None |
SRR6511639 | MDR-TB | lineage2.2.1 | None |
SRR25206897 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29539354 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | None |
SRR1167314 | MDR-TB | lineage4.4.1.1.1 | None |
SRR18715331 | MDR-TB | lineage2.2.1 | None |
SRR10040249 | Pre-XDR-TB | lineage2.2.1 | None |
SRR16370591 | Pre-XDR-TB | lineage4.5 | None |
ERR3794365 | MDR-TB | lineage2.2.1 | None |
ERR13284565 | MDR-TB | lineage2.2.1 | None |
SRR11662342 | MDR-TB | lineage2.2.1 | None |
ERR13284814 | MDR-TB | lineage4.3.3 | None |
ERR13285086 | MDR-TB | lineage2.2.1 | None |
SRR29231570 | MDR-TB | lineage4.3.4.1 | None |
SRR29231765 | MDR-TB | lineage4.3.3 | None |
SRR16087946 | MDR-TB | lineage4.3.3 | None |
SRR25207138 | MDR-TB | lineage2.2.1 | None |
ERR2510358 | MDR-TB | lineage2.2.1 | pk |
ERR2707115 | MDR-TB | lineage4.3.3 | cd |
ERR2706936 | MDR-TB | lineage4.3.4.1 | cd |
ERR11044274 | MDR-TB | lineage1.2.2.2 | None |
ERR11081429 | MDR-TB | lineage4.2.1 | None |
SRR1173282 | MDR-TB | lineage4.4.1.1.1 | None |
SRR1167254 | MDR-TB | lineage4.4.1.1.1 | None |
SRR6832200 | MDR-TB | lineage2.2.1 | None |
SRR1173742 | MDR-TB | lineage4.4.1.1.1 | None |
ERR13276400 | MDR-TB | lineage1.2.2.2 | None |
ERR13285094 | MDR-TB | lineage2.2.1 | None |
SRR29231758 | MDR-TB | lineage4.3.3 | None |
ERR2041937 | MDR-TB | lineage2.2.1 | None |
SRR12062530 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11081028 | MDR-TB | lineage4.2.1 | None |
ERR13285007 | MDR-TB | lineage4.2.1 | None |
SRR29681272 | MDR-TB | lineage2.2.1 | None |
SRR12062537 | Pre-XDR-TB | lineage2.2.1 | None |
SRR10040224 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4798362 | Pre-XDR-TB | lineage3.1.2 | in |
SRR10040298 | MDR-TB | lineage2.2.1 | None |
SRR25207035 | Pre-XDR-TB | lineage2.2.1 | None |
SRR7655954 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None |
ERR11641190 | MDR-TB | lineage2.2.1 | None |
SRR29230789 | MDR-TB | lineage4.3.3 | None |
ERR4828820 | MDR-TB | lineage4.1.2.1 | None |
SAMN02403521 | MDR-TB | lineage4.4.1.1.1 | za |
ERR2706962 | MDR-TB | lineage4.3.4.1 | cd |
ERR2706967 | MDR-TB | lineage4.3.3 | cd |
ERR2707063 | MDR-TB | lineage4.3.3 | cd |
SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None |
ERR4800675 | MDR-TB | lineage4.5 | None |
SRR19428597 | RR-TB | lineage3.1.1;lineage4.3.3 | None |
ERR13285085 | MDR-TB | lineage2.2.1 | None |
SRR10040164 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1165290 | MDR-TB | lineage4.4.1.1.1 | None |
ERR2041944 | Pre-XDR-TB | lineage2.2.1 | None |
SRR19428541 | RR-TB | lineage3.1.1 | None |
ERR4423637 | Pre-XDR-TB | lineage4.6.2.2 | None |
ERR11082363 | MDR-TB | lineage4.3.3 | None |
SRR1173358 | MDR-TB | lineage4.4.1.1.1 | None |
ERR8774265 | Pre-XDR-TB | lineage4.6.2.2 | None |
SRR10040540 | MDR-TB | lineage2.2.1 | None |
SRR1173378 | MDR-TB | lineage4.4.1.1.1 | None |
SRR29231702 | MDR-TB | lineage4.3.3 | None |
SRR29231860 | MDR-TB | lineage4.3.4.1 | None |
ERR13284618 | MDR-TB | lineage2.2.1 | None |
ERR13284958 | MDR-TB | lineage4.2.1 | None |
SRR29231677 | MDR-TB | lineage4.3.3 | None |
ERR3794414 | MDR-TB | lineage2.2.1 | None |
SRR1165221 | MDR-TB | lineage4.4.1.1.1 | None |
SRR23252678 | MDR-TB | lineage1.2.2.2 | None |
SRR6824660 | MDR-TB | lineage2.2.1 | cn |
SRR24255874 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13285055 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29539379 | Pre-XDR-TB | lineage2.2.1;lineage4.1 | None |
SRR29231701 | MDR-TB | lineage4.3.3 | None |
SRR12062531 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29539850 | MDR-TB | lineage2.2.1 | None |
SRR29231862 | MDR-TB | lineage4.3.3 | None |
SRR29231555 | MDR-TB | lineage4.3.3 | None |
ERR8650528 | MDR-TB | lineage2.2.1 | None |
SRR19315458 | Pre-XDR-TB | lineage4.5 | None |
SRR29052829 | Pre-XDR-TB | lineage4.5 | None |
ERR13194049 | MDR-TB | lineage2.2.2 | None |
ERR2864290 | MDR-TB | lineage2.2.1 | pt |