Rv0667 - p.Ser441Gln
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
2 RR-TB
0 HR-TB
72 MDR-TB
24 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1.1 | 10 |
| lineage3.1.1 | 1 |
| lineage4.3.3 | 23 |
| lineage2.2.1 | 39 |
| lineage1.2.2.2 | 3 |
| lineage4.5 | 4 |
| lineage4.2.1 | 4 |
| lineage4.3.4.1 | 4 |
| lineage3.1.2 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage3 | 1 |
| lineage4.6.2.2 | 2 |
| lineage2.2.1;lineage4.1 | 1 |
| lineage2.2.2 | 1 |
| lineage3.1.1;lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 98 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1165290 | MDR-TB | lineage4.4.1.1.1 | None | SRR19428541 | RR-TB | lineage3.1.1 | None | ERR11082363 | MDR-TB | lineage4.3.3 | None | SRR12062534 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040540 | MDR-TB | lineage2.2.1 | None | SRR1173378 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173742 | MDR-TB | lineage4.4.1.1.1 | None | ERR3794414 | MDR-TB | lineage2.2.1 | None | ERR13285055 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276400 | MDR-TB | lineage1.2.2.2 | None | ERR13285094 | MDR-TB | lineage2.2.1 | None | SRR12062530 | Pre-XDR-TB | lineage2.2.1 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370591 | Pre-XDR-TB | lineage4.5 | None | ERR3794365 | MDR-TB | lineage2.2.1 | None | ERR13285007 | MDR-TB | lineage4.2.1 | None | ERR8650528 | MDR-TB | lineage2.2.1 | None | SRR11662342 | MDR-TB | lineage2.2.1 | None | SRR10040224 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231570 | MDR-TB | lineage4.3.4.1 | None | SRR29231765 | MDR-TB | lineage4.3.3 | None | ERR4798362 | Pre-XDR-TB | lineage3.1.2 | in | ERR11641190 | MDR-TB | lineage2.2.1 | None | SRR25207138 | MDR-TB | lineage2.2.1 | None | ERR2864290 | MDR-TB | lineage2.2.1 | pt | ERR2706962 | MDR-TB | lineage4.3.4.1 | cd | ERR2706967 | MDR-TB | lineage4.3.3 | cd | ERR2707063 | MDR-TB | lineage4.3.3 | cd | SRR25206916 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040164 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173282 | MDR-TB | lineage4.4.1.1.1 | None | SRR29231700 | MDR-TB | lineage4.3.3 | None | SRR12062532 | Pre-XDR-TB | lineage2.2.1 | None | SRR1167254 | MDR-TB | lineage4.4.1.1.1 | None | ERR13284618 | MDR-TB | lineage2.2.1 | None | SRR25206897 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539354 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | None | SRR1165221 | MDR-TB | lineage4.4.1.1.1 | None | SRR23252678 | MDR-TB | lineage1.2.2.2 | None | SRR18715331 | MDR-TB | lineage2.2.1 | None | SRR10040249 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081028 | MDR-TB | lineage4.2.1 | None | SRR19315458 | Pre-XDR-TB | lineage4.5 | None | ERR13284565 | MDR-TB | lineage2.2.1 | None | SRR12062537 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040298 | MDR-TB | lineage2.2.1 | None | SRR25207035 | Pre-XDR-TB | lineage2.2.1 | None | SRR7655954 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR16087946 | MDR-TB | lineage4.3.3 | None | SRR29230789 | MDR-TB | lineage4.3.3 | None | SRR29052829 | Pre-XDR-TB | lineage4.5 | None | ERR4828820 | MDR-TB | lineage4.1.2.1 | None | ERR2707100 | MDR-TB | lineage4.3.3 | cd | ERR2706938 | MDR-TB | lineage4.3.3 | cd | ERR2707221 | MDR-TB | lineage4.3.3 | cd | ERR2707098 | MDR-TB | lineage4.3.3 | cd | ERR2707173 | MDR-TB | lineage4.3.3 | cd | ERR2707007 | MDR-TB | lineage4.3.3 | cd | SRR29230998 | MDR-TB | lineage4.3.3 | None | ERR11081429 | MDR-TB | lineage4.2.1 | None | SRR28351325 | MDR-TB | lineage3 | None | ERR4423637 | Pre-XDR-TB | lineage4.6.2.2 | None | SRR1173358 | MDR-TB | lineage4.4.1.1.1 | None | ERR8774265 | Pre-XDR-TB | lineage4.6.2.2 | None | SRR6511639 | MDR-TB | lineage2.2.1 | None | SRR29231702 | MDR-TB | lineage4.3.3 | None | SRR29231860 | MDR-TB | lineage4.3.4.1 | None | SRR6832200 | MDR-TB | lineage2.2.1 | None | ERR13284958 | MDR-TB | lineage4.2.1 | None | SRR29231677 | MDR-TB | lineage4.3.3 | None | SRR24255874 | Pre-XDR-TB | lineage2.2.1 | None | SRR1167314 | MDR-TB | lineage4.4.1.1.1 | None | SRR29539379 | Pre-XDR-TB | lineage2.2.1;lineage4.1 | None | SRR29231758 | MDR-TB | lineage4.3.3 | None | SRR29231701 | MDR-TB | lineage4.3.3 | None | SRR12062531 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539850 | MDR-TB | lineage2.2.1 | None | SRR29231862 | MDR-TB | lineage4.3.3 | None | SRR29231555 | MDR-TB | lineage4.3.3 | None | SRR29681272 | MDR-TB | lineage2.2.1 | None | ERR13284814 | MDR-TB | lineage4.3.3 | None | ERR2510358 | MDR-TB | lineage2.2.1 | pk | ERR13285086 | MDR-TB | lineage2.2.1 | None | ERR13194049 | MDR-TB | lineage2.2.2 | None | ERR2707219 | MDR-TB | lineage4.3.3 | cd | ERR2707115 | MDR-TB | lineage4.3.3 | cd | ERR2706936 | MDR-TB | lineage4.3.4.1 | cd | ERR2041937 | MDR-TB | lineage2.2.1 | None | ERR2041932 | MDR-TB | lineage2.2.1 | None | ERR2041931 | MDR-TB | lineage2.2.1 | None | ERR2041944 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824660 | MDR-TB | lineage2.2.1 | cn | ERR4800675 | MDR-TB | lineage4.5 | None | SRR19428597 | RR-TB | lineage3.1.1;lineage4.3.3 | None | ERR11044274 | MDR-TB | lineage1.2.2.2 | None | ERR13285085 | MDR-TB | lineage2.2.1 | None | SAMN02403520 | MDR-TB | lineage4.4.1.1.1 | za | SAMN02403521 | MDR-TB | lineage4.4.1.1.1 | za |
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