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SRA data
Rv0676c
- c.1374T>C
Drug resistance types
4 Sensitive
0 RR-TB
8 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
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lineage
Count
lineage
Count
La1.7;lineage4.9;lineage7
2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
2
lineage2.1;lineage4.1.1.1;lineage6.3
2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
1
M.canetti;lineage2.1;lineage6.3
1
lineage4.4.1.2
1
La1.7;lineage3;lineage4.9;lineage7
1
La3;M.canetti;lineage4.8;lineage4.9
1
lineage4.9;lineage7
1
lineage4.9
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
16
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR124642
MDR-TB
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR323056
HR-TB
lineage4.4.1.2
None
ERR323108
HR-TB
La1.7;lineage4.9
None
ERR3445501
HR-TB
La1.7.1;La1.7.X-unk4;lineage7
None
ERR3445502
Sensitive
lineage4.9;lineage7
None
ERR8976043
HR-TB
lineage2.1;lineage2.2;lineage6.3
None
SRR26399239
Sensitive
lineage4.9
None
SRR5341313
Sensitive
La1.7;lineage4.9;lineage7
None
SRR5341315
Other
La1.7;lineage3;lineage4.9;lineage7
None
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