Rv0682 - c.-154_-153insC

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
199 Sensitive 2 RR-TB 49 HR-TB 192 MDR-TB 177 Pre-XDR-TB 11 XDR-TB 16 Other
lineage Counts
lineage Count
lineage2.2.2 612
lineage3 6
lineage4.1.2.1 1
lineage2.2.1;lineage2.2.2 5
lineage2.2.2;lineage4.4.2 2
lineage2.2.2;lineage4.5 3
La1.7;lineage2.2.2 1
lineage4.3.4.2.1 3
lineage4.3.4.1 2
lineage2.2.2;lineage4.9 3
lineage2.2.2;lineage4 3
lineage2.2.1 2
lineage4.8 1
lineage4.3.3 1
lineage4.2.1.1 1
spoligotype Counts
spoligotype Count
None 646
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR26399480 Sensitive lineage2.2.2 None
ERR13243243 MDR-TB lineage2.2.2 None
SRR29093128 XDR-TB lineage2.2.2 None
ERR13230064 Sensitive lineage2.2.2 None
ERR403246 Sensitive lineage2.2.2 None
SRR1020005 Sensitive lineage2.2.2 None
SRR1208407 Sensitive lineage2.2.2 None
SRR29093939 MDR-TB lineage2.2.2 None
SRR29093688 Pre-XDR-TB lineage2.2.2 None
SRR28860110 Sensitive lineage2.2.2 None
SRR1013627 MDR-TB lineage2.2.2 None
ERR4798280 Sensitive lineage3 in
SRR28239462 Sensitive lineage2.2.2 None
SRR6152985 HR-TB lineage2.2.2 ca
SRR6153273 Sensitive lineage2.2.2 ca
SRR6397393 Sensitive lineage2.2.2 ca
SRR6397561 Sensitive lineage2.2.2 ca
SRR6397796 Sensitive lineage2.2.2 ca
SRR6397700 Sensitive lineage2.2.2 ca
SRR7496541 Sensitive lineage2.2.2 us
SRR28409608 MDR-TB lineage2.2.2 None
SRR29052658 Sensitive lineage2.2.2 None
SRR26387470 MDR-TB lineage2.2.2 None
SAMN02360557 Pre-XDR-TB lineage2.2.2 kr
SAMN02360555 Pre-XDR-TB lineage2.2.2 kr
SAMN02360561 MDR-TB lineage2.2.2 kr
SAMN02360559 Pre-XDR-TB lineage2.2.2 kr
SAMN02360617 Pre-XDR-TB lineage2.2.2 kr
SRR1047984 Pre-XDR-TB lineage2.2.2 None
SAMN02360616 Pre-XDR-TB lineage2.2.2 kr
SAMN02360594 MDR-TB lineage2.2.2 kr
SRR1049075 Pre-XDR-TB lineage2.2.2 None
ERR4822343 Pre-XDR-TB lineage2.2.2 None
SRR1049074 Pre-XDR-TB lineage2.2.2 None
SAMN02398696 Pre-XDR-TB lineage2.2.2 kr
SAMN02398711 Pre-XDR-TB lineage2.2.2 kr
SAMN02398704 Pre-XDR-TB lineage2.2.2 kr
SAMN02398712 Pre-XDR-TB lineage2.2.2 kr
ERR4810671 Sensitive lineage2.2.2 cn
SRR1202568 Sensitive lineage2.2.2 None
ERR11082765 Sensitive lineage4.1.2.1 None
SRR10397271 Sensitive lineage2.2.2 None
SAMN02360582 Sensitive lineage2.2.2 kr
SAMN02360593 Pre-XDR-TB lineage2.2.2 kr
SAMN02360596 Pre-XDR-TB lineage2.2.2 kr
SAMN02360610 Pre-XDR-TB lineage2.2.2 kr
SAMN02360619 Pre-XDR-TB lineage2.2.2 kr
SAMN02360576 MDR-TB lineage2.2.2 kr
SAMN02398698 Pre-XDR-TB lineage2.2.2 kr
SRR1048856 Pre-XDR-TB lineage2.2.2 None
SRR1048863 MDR-TB lineage2.2.2 None
SRR1049038 MDR-TB lineage2.2.2 None
SAMN02398713 Pre-XDR-TB lineage2.2.2 kr
SAMN02360613 Pre-XDR-TB lineage2.2.2 kr
SAMN02360558 Pre-XDR-TB lineage2.2.2 kr
SAMN02360603 Pre-XDR-TB lineage2.2.2 kr
SAMN02360601 MDR-TB lineage2.2.2 kr
SAMN02360551 Pre-XDR-TB lineage2.2.2 kr
ERR4195671 Pre-XDR-TB lineage2.2.2 None
DRR130191 Pre-XDR-TB lineage2.2.2 None
ERR11083149 MDR-TB lineage2.2.2 None
SAMN02360604 Pre-XDR-TB lineage2.2.2 kr
SAMN02360583 HR-TB lineage2.2.2 None
SAMN37191346 Sensitive lineage2.2.2 None
SRR18910194 HR-TB lineage2.2.2 None
DRR034509 Sensitive lineage2.2.2 None
DRR130074 MDR-TB lineage2.2.2 None
ERR13191050 Pre-XDR-TB lineage2.2.2 None
ERR13191053 MDR-TB lineage2.2.2 None
DRR188986 Sensitive lineage2.2.2 None
ERR11080987 HR-TB lineage2.2.2 None
DRR189013 Sensitive lineage2.2.2 None
DRR034497 Sensitive lineage2.2.2 None
ERR13191054 MDR-TB lineage2.2.2 None
DRR473807 Sensitive lineage2.2.2 None
ERR13191055 MDR-TB lineage2.2.2 None
ERR13191056 MDR-TB lineage2.2.2 None
DRR473917 Sensitive lineage2.2.2 None
ERR13191057 MDR-TB lineage2.2.2 None
ERR1213864 HR-TB lineage2.2.2 kr
ERR13191059 MDR-TB lineage2.2.2 None
ERR13191065 MDR-TB lineage2.2.2 None
ERR13191063 MDR-TB lineage2.2.2 None
ERR13191066 MDR-TB lineage2.2.2 None
ERR13191069 MDR-TB lineage2.2.2 None
ERR13191076 Pre-XDR-TB lineage2.2.2 None
ERR13191075 Pre-XDR-TB lineage2.2.2 None
ERR13191060 MDR-TB lineage2.2.2 None
ERR13191095 Pre-XDR-TB lineage2.2.2 None
ERR13191100 MDR-TB lineage2.2.2 None
ERR13191094 MDR-TB lineage2.2.2 None
ERR13191093 MDR-TB lineage2.2.2 None
ERR13191077 MDR-TB lineage2.2.2 None
ERR13191369 Pre-XDR-TB lineage2.2.2 None
ERR13191366 MDR-TB lineage2.2.2 None
ERR13191098 MDR-TB lineage2.2.2 None
ERR13191370 Pre-XDR-TB lineage2.2.2 None
ERR13191363 MDR-TB lineage2.2.1;lineage2.2.2 None
ERR13191373 Pre-XDR-TB lineage2.2.2 None
ERR13191375 MDR-TB lineage2.2.2 None
ERR13191621 Pre-XDR-TB lineage2.2.2 None
ERR13191623 MDR-TB lineage2.2.2 None
ERR13191710 MDR-TB lineage2.2.2 None
ERR13193998 Pre-XDR-TB lineage2.2.2 None
ERR13193755 MDR-TB lineage2.2.2 None
ERR13193999 MDR-TB lineage2.2.2 None
ERR13194000 MDR-TB lineage2.2.2 None
ERR13192092 MDR-TB lineage2.2.2 None
ERR13193935 Sensitive lineage2.2.2 None
ERR13192113 MDR-TB lineage2.2.2 None
ERR13194003 MDR-TB lineage2.2.2 None
ERR13193753 MDR-TB lineage2.2.2 None
ERR13194024 Pre-XDR-TB lineage2.2.2 None
ERR13194049 MDR-TB lineage2.2.2 None
ERR13194053 MDR-TB lineage2.2.2 None
ERR13194054 MDR-TB lineage2.2.2 None
ERR13194055 MDR-TB lineage2.2.2 None
ERR13194233 Sensitive lineage2.2.2 None
ERR13194859 MDR-TB lineage2.2.2 None
ERR13194429 MDR-TB lineage2.2.2 None
ERR13194025 MDR-TB lineage2.2.2 None
ERR13194665 MDR-TB lineage2.2.2 None
ERR13194084 Pre-XDR-TB lineage2.2.2 None
ERR13194117 MDR-TB lineage2.2.2 None
ERR13194428 MDR-TB lineage2.2.2 None
ERR13195056 MDR-TB lineage2.2.2 None
ERR13195220 MDR-TB lineage2.2.2 None
ERR13195379 MDR-TB lineage2.2.2 None
ERR13195059 MDR-TB lineage2.2.2 None
ERR13195354 MDR-TB lineage2.2.2 None
ERR13195058 MDR-TB lineage2.2.2 None
ERR13195559 MDR-TB lineage2.2.2 None
ERR13195396 MDR-TB lineage2.2.2 None
ERR13195563 Pre-XDR-TB lineage2.2.2 None
ERR13195561 MDR-TB lineage2.2.2 None
ERR13195571 MDR-TB lineage2.2.2 None
ERR13195573 MDR-TB lineage2.2.2 None
ERR13195574 MDR-TB lineage2.2.2 None
ERR13195555 MDR-TB lineage2.2.2 None
ERR13195575 Pre-XDR-TB lineage2.2.2 None
ERR13195578 MDR-TB lineage2.2.2 None
ERR13195565 MDR-TB lineage2.2.2 None
ERR13195604 MDR-TB lineage2.2.2 None
ERR13231273 Sensitive lineage2.2.2 None
ERR13195610 HR-TB lineage2.2.2 None
ERR13195613 MDR-TB lineage2.2.2 None
ERR13195616 Pre-XDR-TB lineage2.2.2 None
ERR13195617 HR-TB lineage2.2.2 None
ERR13243542 MDR-TB lineage2.2.2 None
ERR13245556 MDR-TB lineage2.2.2 None
ERR13243543 MDR-TB lineage2.2.2 None
ERR13258487 MDR-TB lineage2.2.2 None
ERR13265081 MDR-TB lineage2.2.2 None
ERR13265086 MDR-TB lineage2.2.2 None
ERR13265094 Pre-XDR-TB lineage2.2.2 None
ERR13265196 MDR-TB lineage2.2.2 None
ERR13291275 Sensitive lineage2.2.2 None
ERR13291443 Sensitive lineage2.2.2 None
ERR13291987 HR-TB lineage2.2.2 None
ERR13292447 MDR-TB lineage2.2.2 None
ERR3132099 HR-TB lineage2.2.2 None
ERR13296441 MDR-TB lineage2.2.2 None
ERR13296459 HR-TB lineage2.2.2 None
ERR13296451 Pre-XDR-TB lineage2.2.2 None
ERR13296461 MDR-TB lineage2.2.2 None
ERR552176 HR-TB lineage2.2.2 None
ERR552177 HR-TB lineage2.2.2 None
SAMEA2534464 HR-TB lineage2.2.2 kr
SAMN02360590 MDR-TB lineage2.2.2 None
SRR1013633 MDR-TB lineage2.2.2 None
SRR1013634 MDR-TB lineage2.2.2 None
SRR1013658 Pre-XDR-TB lineage2.2.2 None
SRR1013659 Pre-XDR-TB lineage2.2.2 None
SRR1013672 Pre-XDR-TB lineage2.2.2 None
SRR1013673 Pre-XDR-TB lineage2.2.2 None
SAMN02360615 Pre-XDR-TB lineage2.2.2 kr
SAMN02360608 Pre-XDR-TB lineage2.2.2 kr
SRR1049005 RR-TB lineage2.2.2 None
SRR1049054 Pre-XDR-TB lineage2.2.2 None
SRR1049055 Pre-XDR-TB lineage2.2.2 None
SRR1049066 Pre-XDR-TB lineage2.2.2 None
SRR1049067 Pre-XDR-TB lineage2.2.2 None
SRR1020014 Pre-XDR-TB lineage2.2.2 None
SRR1020013 Pre-XDR-TB lineage2.2.2 None
SRR125301 Sensitive lineage2.2.2 None
SRR125306 Sensitive lineage2.2.2 None
SRR1049020 Pre-XDR-TB lineage2.2.2 None
SRR1202546 Sensitive lineage2.2.2 None
SRR1202551 Sensitive lineage2.2.2 None
SRR1049059 Pre-XDR-TB lineage2.2.2 None
SRR15369025 Sensitive lineage2.2.2;lineage4.4.2 None
SRR1202581 Sensitive lineage2.2.2 None
SRR28467045 MDR-TB lineage2.2.2 None
ERR4811238 Sensitive lineage2.2.2 None
ERR4811265 Sensitive lineage2.2.2 None
ERR4811378 Sensitive lineage2.2.2 None
ERR4828684 HR-TB lineage2.2.2 vn
ERR4828693 HR-TB lineage2.2.2 vn
SRR26387496 MDR-TB lineage2.2.2 None
ERR3132080 MDR-TB lineage2.2.2 None
SRR067488 Sensitive lineage2.2.2 None
SRR1049071 Pre-XDR-TB lineage2.2.2 None
ERR551834 Sensitive lineage2.2.2 de
ERR400424 Sensitive lineage2.2.2 gb
ERR1213857 MDR-TB lineage2.2.2 kr
ERR2516219 RR-TB lineage2.2.2 be
ERR2516143 Pre-XDR-TB lineage2.2.2 es
ERR2516692 MDR-TB lineage2.2.2 nl
ERR2516737 Sensitive lineage2.2.2 pe
ERR2516446 Sensitive lineage2.2.2 pe
SRR7796667 Pre-XDR-TB lineage2.2.2 None
DRR474022 Sensitive lineage2.2.2 None
DRR473920 Other lineage2.2.2 None
SRR6256978 MDR-TB lineage2.2.2 ru
SRR21709865 Sensitive lineage2.2.2 None
DRR184887 MDR-TB lineage2.2.2 vn
SRR11033603 Sensitive lineage2.2.2 None
DRR185008 Sensitive lineage2.2.2 vn
DRR185014 HR-TB lineage2.2.2 vn
SRR1202593 Sensitive lineage2.2.2 None
ERR11138642 Sensitive lineage2.2.2 None
ERR11138650 Pre-XDR-TB lineage2.2.2 None
SRR1208213 Sensitive lineage2.2.2 None
SRR1208257 Sensitive lineage2.2.2 None
DRR473773 Sensitive lineage2.2.2 None
ERR1213827 Sensitive lineage2.2.2 kr
ERR1213830 Sensitive lineage2.2.2 kr
ERR1213853 MDR-TB lineage2.2.2 kr
ERR1213859 MDR-TB lineage2.2.2 kr
SRR1144813 Pre-XDR-TB lineage2.2.2 None
SRR2075818 Pre-XDR-TB lineage2.2.2 None
SRR1202515 Sensitive lineage2.2.2 None
ERR3132092 MDR-TB lineage2.2.2 None
ERR13264803 Other lineage2.2.2 None
SRR1202636 Sensitive lineage2.2.2 None
ERR11043658 MDR-TB lineage2.2.2 None
SRR067484 Sensitive lineage2.2.2 None
SRR26387473 MDR-TB lineage2.2.2 None
SRR21709347 HR-TB lineage2.2.2 None
SRR16088007 Sensitive lineage2.2.2 None
SRR1013544 Pre-XDR-TB lineage2.2.2 None
ERR13194007 MDR-TB lineage2.2.2 None
ERR13194006 MDR-TB lineage2.2.2 None
ERR152761 HR-TB lineage2.2.2 None
SRR1013674 Pre-XDR-TB lineage2.2.2 None
SRR15368814 Other lineage2.2.2;lineage4.5 None
SRR1048843 Pre-XDR-TB lineage2.2.2 None
SRR1049070 Pre-XDR-TB lineage2.2.2 None
SRR1013650 Pre-XDR-TB lineage2.2.2 None
SRR26112813 Sensitive lineage2.2.2 None
ERR11069075 MDR-TB lineage2.2.2 None
ERR11081550 MDR-TB lineage2.2.2 None
SRR1049024 MDR-TB lineage2.2.2 None
SRR1144807 Pre-XDR-TB lineage2.2.2 None
ERR3132282 Sensitive lineage2.2.2 None
SRR1049029 Pre-XDR-TB lineage2.2.2 None
SRR1144776 Pre-XDR-TB lineage2.2.2 None
SRR26112763 Sensitive lineage2.2.2 None
SRR1208415 Sensitive lineage2.2.2 None
ERR13243569 Pre-XDR-TB lineage2.2.2 None
SRR29093099 MDR-TB lineage2.2.2 None
SRR1144749 Pre-XDR-TB lineage2.2.2 None
SRR22251278 Sensitive lineage2.2.2 None
DRR130192 Pre-XDR-TB lineage2.2.2 None
ERR13193933 Sensitive lineage2.2.2 None
SRR069922 Sensitive lineage2.2.2 None
SRR26387499 MDR-TB lineage2.2.2 None
ERR3639775 MDR-TB lineage2.2.2 None
ERR13243907 MDR-TB lineage2.2.2 None
SRR1013553 MDR-TB lineage2.2.2 None
SRR1208362 Sensitive lineage2.2.2 None
SRR28239978 Sensitive lineage2.2.2 None
SRR15368757 Sensitive lineage2.2.2 None
SRR29093914 Sensitive lineage2.2.2 None
SRR29093928 XDR-TB lineage2.2.2 None
ERR13194027 Sensitive lineage2.2.2 None
ERR13230578 Sensitive La1.7;lineage2.2.2 None
ERR13243548 MDR-TB lineage2.2.2 None
SRR29093938 Pre-XDR-TB lineage2.2.2 None
SRR27450568 Sensitive lineage3 None
SRR29093947 XDR-TB lineage2.2.2 None
ERR11138648 Pre-XDR-TB lineage2.2.2 None
SRR1013644 MDR-TB lineage2.2.2 None
SRR29093955 XDR-TB lineage2.2.2 None
SRR26397807 Sensitive lineage2.2.2 None
SRR29050779 Other lineage2.2.1;lineage2.2.2 None
ERR3132278 Sensitive lineage2.2.2 None
DRR130165 Pre-XDR-TB lineage2.2.2 None
ERR13291606 Sensitive lineage2.2.2 None
SRR1144737 Pre-XDR-TB lineage2.2.2 None
ERR11138658 Pre-XDR-TB lineage2.2.2 None
SRR8217909 MDR-TB lineage2.2.2 None
ERR867556 Sensitive lineage2.2.2 None
ERR13193939 Sensitive lineage2.2.2 None
SRR26387498 MDR-TB lineage2.2.2 None
SRR067502 Sensitive lineage2.2.2 None
SRR070032 Sensitive lineage2.2.2 None
SRR1013651 Pre-XDR-TB lineage2.2.2 None
ERR13254328 MDR-TB lineage2.2.2 None
SRR29093358 MDR-TB lineage2.2.2 None
SRR18591741 MDR-TB lineage2.2.2 None
SRR1049019 Pre-XDR-TB lineage2.2.2 None
SRR1048854 Pre-XDR-TB lineage2.2.2 None
SRR067468 Sensitive lineage2.2.2 None
SRR14520034 Sensitive lineage2.2.2 None
ERR13260010 Pre-XDR-TB lineage2.2.2 None
ERR3132091 MDR-TB lineage2.2.2 None
SRR1048855 Pre-XDR-TB lineage2.2.2 None
ERR3132074 MDR-TB lineage2.2.2 None
ERR13230703 Other lineage2.2.2 None
SRR069930 Sensitive lineage2.2.2 None
DRR189003 Sensitive lineage2.2.2 None
ERR13284995 MDR-TB lineage2.2.2 None
ERR13230057 Other lineage2.2.2 None
SRR1020006 Sensitive lineage2.2.2 None
ERR13284063 MDR-TB lineage2.2.2 None
SRR28240136 Sensitive lineage2.2.2 None
SRR1208259 Sensitive lineage2.2.2 None
SRR29093916 XDR-TB lineage2.2.2 None
SRR125309 Sensitive lineage2.2.2 None
SRR19267893 Sensitive lineage2.2.2 None
SRR21676322 HR-TB lineage2.2.2 None
SRR16370661 Sensitive lineage2.2.2 None
SRR21677250 Sensitive lineage2.2.2 None
SRR21685347 Sensitive lineage2.2.2 None
SRR18913795 MDR-TB lineage2.2.2 None
SRR15368707 HR-TB lineage2.2.1;lineage2.2.2 None
SRR21820124 Sensitive lineage2.2.2 None
SRR21820125 Sensitive lineage2.2.2 None
SRR19320531 Sensitive lineage2.2.2 None
SRR19325663 Sensitive lineage2.2.2 None
SRR21710587 HR-TB lineage2.2.2 None
SRR21661639 Sensitive lineage2.2.2 None
SRR24799220 HR-TB lineage2.2.2 None
SRR28385876 Pre-XDR-TB lineage2.2.2 None
SRR22249954 MDR-TB lineage2.2.2 None
SRR21820122 Sensitive lineage2.2.2 None
SRR28385884 MDR-TB lineage2.2.2 None
SRR25515671 HR-TB lineage2.2.2 None
SRR21732568 HR-TB lineage2.2.2 None
SRR25784783 Sensitive lineage2.2.2 None
SRR28859662 Sensitive lineage2.2.2 None
SRR28385880 Pre-XDR-TB lineage2.2.2 None
SRR28385882 MDR-TB lineage2.2.2 None
SRR28385881 MDR-TB lineage2.2.2 None
SRR29052974 HR-TB lineage2.2.2 None
SRR17657975 HR-TB lineage2.2.2 None
SRR29053198 Sensitive lineage2.2.2 None
SRR28859629 Sensitive lineage2.2.2 None
SRR29093357 Pre-XDR-TB lineage2.2.2 None
SRR29093919 Pre-XDR-TB lineage2.2.2 None
SRR29056220 Sensitive lineage2.2.2 None
SRR29093687 Sensitive lineage2.2.2 None
SRR29093893 Pre-XDR-TB lineage2.2.2 None
SRR29093950 Pre-XDR-TB lineage2.2.2 None
SRR29093906 MDR-TB lineage2.2.2 None
SRR21887758 MDR-TB lineage2.2.2 None
SRR1013680 Pre-XDR-TB lineage2.2.2 None
SRR6397509 Sensitive lineage2.2.2 ca
DRR474190 Sensitive lineage2.2.2 None
SRR28467020 Pre-XDR-TB lineage2.2.2 None
SRR6152960 HR-TB lineage2.2.2 ca
SRR1013555 Pre-XDR-TB lineage2.2.2 None
ERR4822356 MDR-TB lineage2.2.2 None
SRR29681403 Pre-XDR-TB lineage2.2.2 None
SRR6824584 Pre-XDR-TB lineage2.2.2 cn
SRR1144780 Pre-XDR-TB lineage2.2.2 None
SRR069982 Sensitive lineage2.2.2 None
SRR1048864 MDR-TB lineage2.2.2 None
SRR1049044 Pre-XDR-TB lineage2.2.2 None
SRR1202641 Sensitive lineage2.2.2 None
ERR152760 HR-TB lineage2.2.2 None
ERR13194010 Pre-XDR-TB lineage2.2.2 None
ERR182047 Sensitive lineage4.3.4.2.1 mw
DRR185108 Sensitive lineage2.2.2 vn
SRR29093119 Pre-XDR-TB lineage2.2.2 None
SRR29093366 XDR-TB lineage2.2.2;lineage4.4.2 None
SRR29053346 Sensitive lineage2.2.2 None
ERR13265638 Sensitive lineage2.2.2 None
ERR10465955 Sensitive lineage2.2.2 None
ERR13232608 MDR-TB lineage2.2.2 None
SRR28467067 MDR-TB lineage2.2.2 None
SRR28467071 Pre-XDR-TB lineage2.2.2 None
SRR29055382 Sensitive lineage2.2.2 None
SRR5065656 Sensitive lineage2.2.2 vn
SRR23691399 Sensitive lineage2.2.2 None
SRR070000 Sensitive lineage2.2.2 None
SRR21675639 Sensitive lineage2.2.2 None
SRR1048857 Pre-XDR-TB lineage2.2.2 None
ERR1213851 MDR-TB lineage2.2.2 kr
SRR5073824 Sensitive lineage2.2.2 vn
SRR1048978 MDR-TB lineage2.2.2 None
SRR5073586 Other lineage2.2.2 vn
SRR26112099 Sensitive lineage2.2.2 None
SRR1013632 Pre-XDR-TB lineage2.2.2 None
SRR1050530 Pre-XDR-TB lineage2.2.2 None
SRR13583500 MDR-TB lineage4.3.4.1 None
SRR1013645 MDR-TB lineage2.2.2 None
ERR11488553 Pre-XDR-TB lineage4.3.4.2.1 None
SRR1048858 Pre-XDR-TB lineage2.2.2 None
SRR26387497 MDR-TB lineage2.2.2 None
ERR11138629 Sensitive lineage2.2.2 None
SRR23862060 Sensitive lineage2.2.2 None
ERR9124885 MDR-TB lineage2.2.2 None
DRR034502 Sensitive lineage2.2.2 None
DRR130190 Pre-XDR-TB lineage2.2.2 None
DRR473915 HR-TB lineage2.2.2 None
SRR8758892 MDR-TB lineage2.2.2 None
ERR11082603 Sensitive lineage2.2.2 None
SRR29093106 MDR-TB lineage2.2.2 None
SRR27450182 Sensitive lineage3 None
SRR1144783 Pre-XDR-TB lineage2.2.2 None
SRR16058414 MDR-TB lineage2.2.2 None
SRR29093123 XDR-TB lineage2.2.2 None
SRR29093120 XDR-TB lineage2.2.2 None
SRR1013662 Pre-XDR-TB lineage2.2.2 None
SRR2075817 Pre-XDR-TB lineage2.2.2 None
SRR24083648 Sensitive lineage2.2.2 None
ERR13291217 Sensitive lineage2.2.2 None
SRR29093941 HR-TB lineage2.2.2 None
DRR474161 Sensitive lineage2.2.2 None
SRR1049025 MDR-TB lineage2.2.2 None
DRR130065 Pre-XDR-TB lineage2.2.2;lineage4.9 None
SRR26387474 MDR-TB lineage2.2.2 None
SRR29225201 HR-TB lineage2.2.2 None
SRR29225203 HR-TB lineage2.2.2 None
SRR1013668 Pre-XDR-TB lineage2.2.2 None
SRR1049046 Pre-XDR-TB lineage2.2.2 None
ERR11050001 Sensitive lineage2.2.2 None
SRR1013631 Pre-XDR-TB lineage2.2.2 None
DRR346650 Sensitive lineage2.2.2 None
SRR1013649 Pre-XDR-TB lineage2.2.2 None
ERR13284624 MDR-TB lineage2.2.2 None
SRR070002 Sensitive lineage2.2.2 None
SRR1013683 Pre-XDR-TB lineage2.2.2 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SRR1208348 Sensitive lineage2.2.2 None
SRR1202596 Sensitive lineage2.2.2 None
ERR13245323 Pre-XDR-TB lineage2.2.2 None
ERR11044957 Other lineage2.2.2 None
SRR29093122 XDR-TB lineage2.2.2 None
SRR21686596 Sensitive lineage2.2.2 None
ERR13284773 MDR-TB lineage2.2.2 None
SRR29093925 MDR-TB lineage2.2.2 None
ERR11138653 Pre-XDR-TB lineage2.2.2 None
DRR474026 Sensitive lineage2.2.2 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
ERR13232609 MDR-TB lineage2.2.2 None
SRR29093109 Pre-XDR-TB lineage2.2.2 None
SRR1049047 Pre-XDR-TB lineage2.2.2 None
ERR13194014 HR-TB lineage2.2.2 None
ERR13194183 Sensitive lineage2.2.2 None
ERR13231268 Sensitive lineage2.2.2 None
SRR29225202 HR-TB lineage2.2.2 None
SRR29055656 Sensitive lineage2.2.2 None
SRR1202595 Sensitive lineage2.2.2 None
ERR11138637 MDR-TB lineage2.2.2 None
ERR867561 Sensitive lineage3 None
ERR13266782 Pre-XDR-TB lineage2.2.2 None
SRR1013578 HR-TB lineage2.2.2;lineage4 None
ERR11775684 Sensitive lineage2.2.2 None
SRR21676313 HR-TB lineage2.2.2 None
ERR13243546 MDR-TB lineage2.2.2 None
SRR1013679 Pre-XDR-TB lineage2.2.2 None
ERR3132076 MDR-TB lineage2.2.2 None
SRR1048990 Sensitive lineage2.2.2 None
SRR1013594 MDR-TB lineage2.2.2 None
SRR10040195 MDR-TB lineage2.2.1 None
SRR18054793 Pre-XDR-TB lineage2.2.2 None
SRR1013663 Pre-XDR-TB lineage2.2.2 None
ERR13284172 MDR-TB lineage2.2.2 None
SRR1048851 Pre-XDR-TB lineage2.2.2 None
SRR29051499 MDR-TB lineage4.3.4.1 None
ERR13194008 XDR-TB lineage2.2.2 None
SRR069934 Sensitive lineage2.2.2 None
ERR4798113 Pre-XDR-TB lineage4.8 in
SRR1049028 Pre-XDR-TB lineage2.2.2 None
SRR29093372 XDR-TB lineage2.2.2 None
SRR26387472 MDR-TB lineage2.2.2 None
ERR13191067 MDR-TB lineage2.2.2 None
SRR1013556 Pre-XDR-TB lineage2.2.2 None
ERR3132087 MDR-TB lineage2.2.2 None
ERR11043495 MDR-TB lineage2.2.2 None
SRR26387495 MDR-TB lineage2.2.2 None
DRR130199 Pre-XDR-TB lineage2.2.1 None
SRR30182620 HR-TB lineage2.2.2 None
DRR261126 MDR-TB lineage2.2.2 None
DRR130095 Pre-XDR-TB lineage2.2.2 None
SRR21677625 MDR-TB lineage2.2.2 None
SRR29356795 Sensitive lineage3 None
SRR28409364 HR-TB lineage2.2.2 None
ERR13232478 Pre-XDR-TB lineage2.2.2 None
SRR069941 Sensitive lineage2.2.2 None
ERR13243575 MDR-TB lineage2.2.2 None
ERR025439 HR-TB lineage2.2.2 nl
SRR15368753 Other lineage2.2.2;lineage4.5 None
SRR28170693 Sensitive lineage2.2.2 None
SRR1144733 Pre-XDR-TB lineage2.2.2 None
SRR1049039 MDR-TB lineage2.2.2 None
SRR1049069 Pre-XDR-TB lineage2.2.2 None
SRR1013564 MDR-TB lineage2.2.2 None
SRR2075820 Pre-XDR-TB lineage2.2.2 None
ERR13291900 Sensitive lineage2.2.2 None
SRR28859717 Sensitive lineage2.2.2 None
DRR474196 Sensitive lineage2.2.2 None
SRR1208289 Sensitive lineage2.2.2;lineage4.9 None
SRR16089538 Sensitive lineage2.2.2 None
DRR130098 MDR-TB lineage2.2.2 None
SAMN02398699 Pre-XDR-TB lineage2.2.2 kr
SAMN02398693 Pre-XDR-TB lineage2.2.2 kr
SAMN02398703 Pre-XDR-TB lineage2.2.2 kr
SRR067486 Sensitive lineage2.2.2 None
SRR671753 MDR-TB lineage2.2.2 cn
SRR1013630 Pre-XDR-TB lineage2.2.2;lineage4 None
DRR188714 Sensitive lineage2.2.2 None
SRR6397611 Sensitive lineage2.2.2 ca
ERR11798524 MDR-TB lineage2.2.2 None
SRR1013593 MDR-TB lineage2.2.2 None
SRR6397369 Sensitive lineage2.2.2 ca
ERR3287611 MDR-TB lineage4.3.3 pe
SRR28467054 HR-TB lineage2.2.2 None
SRR6397697 MDR-TB lineage2.2.2 ca
ERR4828544 Other lineage2.2.1;lineage2.2.2 vn
SRR17657925 MDR-TB lineage2.2.2 None
ERR1035135 Other lineage2.2.2 vn
ERR3132100 MDR-TB lineage2.2.2 None
SRR1013559 Pre-XDR-TB lineage2.2.2 None
SRR2075823 Pre-XDR-TB lineage2.2.2 None
SRR1013621 Pre-XDR-TB lineage2.2.2 None
SRR1049045 Pre-XDR-TB lineage2.2.2 None
SRR1710079 Sensitive lineage2.2.2 cn
ERR4814473 Sensitive lineage3 gb
SRR5709906 MDR-TB lineage2.2.2 th
SRR9613552 MDR-TB lineage2.2.2 None
SRR1013606 Sensitive lineage2.2.2 None
SRR1013648 Pre-XDR-TB lineage2.2.2 None
SRR1013682 Pre-XDR-TB lineage2.2.2 None
SRR29093380 Pre-XDR-TB lineage2.2.2 None
ERR234211 Sensitive lineage2.2.2 vn
SRR2075822 Pre-XDR-TB lineage2.2.2 None
SRR30182741 Sensitive lineage2.2.2 None
SRR1013628 MDR-TB lineage2.2.2 None
SRR1048979 MDR-TB lineage2.2.2 None
SRR5067372 Other lineage2.2.1;lineage2.2.2 vn
SRR5067406 HR-TB lineage2.2.2 vn
SRR1013558 Pre-XDR-TB lineage2.2.2 None
DRR346649 Sensitive lineage2.2.2 None
ERR028623 HR-TB lineage2.2.2 None
SRR1049062 Pre-XDR-TB lineage2.2.2 None
SRR29440784 Sensitive lineage2.2.2 None
SRR28409441 Sensitive lineage4.2.1.1 None
SRR13180214 MDR-TB lineage2.2.2 None
SRR25784784 Sensitive lineage2.2.2 None
SRR21714042 Sensitive lineage2.2.2 None
ERR4822348 MDR-TB lineage2.2.2 None
DRR130096 Pre-XDR-TB lineage2.2.2 None
SRR26112807 Sensitive lineage2.2.2 None
ERR1213865 MDR-TB lineage2.2.2 kr
SRR7796668 Pre-XDR-TB lineage2.2.2 None
SRR26112739 Sensitive lineage2.2.2 None
DRR261146 Other lineage2.2.2 None
ERR11069054 MDR-TB lineage2.2.2 None
SRR22251534 HR-TB lineage2.2.2 None
SRR22249552 Sensitive lineage2.2.2 None
SRR1013551 Pre-XDR-TB lineage2.2.2 None
SRR1013552 Pre-XDR-TB lineage2.2.2 None
SRR1048850 Pre-XDR-TB lineage2.2.2 None
SRR067534 Sensitive lineage2.2.2 None
SRR1013626 Pre-XDR-TB lineage2.2.2 None
SRR29050941 HR-TB lineage2.2.2 None
ERR11049669 Other lineage2.2.2 None
SRR28467064 MDR-TB lineage2.2.2 None
SRR18591743 HR-TB lineage2.2.2 None
SRR28859992 Sensitive lineage2.2.2 None
SRR29093912 MDR-TB lineage2.2.2 None
SRR069947 Sensitive lineage2.2.2 None
SRR18591744 MDR-TB lineage2.2.2 None
SRR29093926 MDR-TB lineage2.2.2 None
SRR067489 Sensitive lineage2.2.2 None
ERR867562 Sensitive lineage2.2.2 None
SRR26387494 MDR-TB lineage2.2.2 None
SRR1013560 Pre-XDR-TB lineage2.2.2 None
SRR29093934 MDR-TB lineage2.2.2 None
ERR13191062 MDR-TB lineage2.2.2 None
ERR13231298 Sensitive lineage2.2.2 None
ERR2503414 Sensitive lineage2.2.2 fi
SRR30182678 Sensitive lineage2.2.2 None
ERR13254339 Pre-XDR-TB lineage2.2.2 None
SRR1202510 Sensitive lineage2.2.2 None
ERR13231280 Sensitive lineage2.2.2 None
ERR13231249 Sensitive lineage2.2.2 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR1013675 Pre-XDR-TB lineage2.2.2 None
SRR1048842 Pre-XDR-TB lineage2.2.2 None
SRR6930929 HR-TB lineage2.2.2 None
SRR1013563 MDR-TB lineage2.2.2 None
ERR13258464 Pre-XDR-TB lineage2.2.2 None
ERR13191078 MDR-TB lineage2.2.2 None
SRR26387475 MDR-TB lineage2.2.2 None
SRR29016754 HR-TB lineage2.2.2 None
SRR29681255 Pre-XDR-TB lineage2.2.2 None
SRR1013557 Pre-XDR-TB lineage2.2.2 None
SRR1049063 Pre-XDR-TB lineage2.2.2 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
SRR1049068 Pre-XDR-TB lineage2.2.2 None
SRR1202582 Sensitive lineage2.2.2 None
SRR26936978 Pre-XDR-TB lineage2.2.2 None
SAMN02398710 MDR-TB lineage2.2.2 None
SRR1049058 Pre-XDR-TB lineage2.2.2 None
SRR1013554 MDR-TB lineage2.2.2;lineage4 None
SRR1013543 Pre-XDR-TB lineage2.2.2 None
SRR29056156 MDR-TB lineage4.3.4.2.1 None
ERR11083136 MDR-TB lineage2.2.2 None
ERR11083056 Sensitive lineage2.2.2 None
SRR1013669 Pre-XDR-TB lineage2.2.2 None
ERR13258387 Pre-XDR-TB lineage2.2.2;lineage4.9 None
SRR28170731 Sensitive lineage2.2.2 None
SRR1048859 Pre-XDR-TB lineage2.2.2 None
SRR18591745 MDR-TB lineage2.2.2 None
SRR15368825 Other lineage2.2.2;lineage4.5 None
ERR028358 Sensitive lineage2.2.2 None
SRR29053077 HR-TB lineage2.2.2 None
SRR1020007 Sensitive lineage2.2.2 None
SRR1144796 Pre-XDR-TB lineage2.2.2 None
ERR13231300 Sensitive lineage2.2.2 None
SRR18591742 Pre-XDR-TB lineage2.2.2 None
DRR185024 Other lineage2.2.2 None
SRR1013605 Sensitive lineage2.2.2 None
ERR13195510 MDR-TB lineage2.2.2 None
SRR1048989 Sensitive lineage2.2.2 None
SRR1013625 Pre-XDR-TB lineage2.2.2 None
SRR26387471 MDR-TB lineage2.2.2 None
SRR067547 Sensitive lineage2.2.2 None
ERR13243562 MDR-TB lineage2.2.2 None
ERR13230061 Sensitive lineage2.2.2 None
ERR13246864 Sensitive lineage2.2.2 None
DRR130097 Pre-XDR-TB lineage2.2.2 None
ERR13291772 HR-TB lineage2.2.2 None
DRR189080 Sensitive lineage2.2.2 None
SRR30333231 Sensitive lineage2.2.2 None
SRR1144790 Pre-XDR-TB lineage2.2.2 None
ERR11081081 Sensitive lineage2.2.2 None
SRR28240191 Sensitive lineage2.2.2 None
SRR067493 Sensitive lineage2.2.2 None
DRR474181 Sensitive lineage2.2.2 None
SRR21727567 Sensitive lineage2.2.2 None