SRR1187192
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR6865553
|
Sensitive
|
lineage4.1.2;lineage4.3.2
|
None
|
SRR1640549
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588610
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1187011
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640273
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588596
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588573
|
Sensitive
|
lineage4.1.2
|
None
|
ERR2184231
|
Other
|
lineage4.1.2.1;lineage4.3.3
|
pe
|
SRR1188184
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588556
|
Sensitive
|
lineage4.1.2
|
None
|
ERR6865521
|
Sensitive
|
lineage4.1.2
|
None
|
SRR15217985
|
MDR-TB
|
lineage4.1.2
|
None
|
SRR1640293
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR6865535
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588613
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1367198
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR6866009
|
Other
|
lineage4.1.2
|
None
|
ERR6865348
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640295
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588608
|
Sensitive
|
lineage4.1.2
|
None
|
ERR2510176
|
Sensitive
|
lineage4.1.2
|
pe
|
SRR1640346
|
Sensitive
|
lineage4.1.2
|
None
|
ERR552898
|
Sensitive
|
lineage4.1.2
|
de
|
ERR4025056
|
Other
|
lineage4.1.2.1
|
None
|
SRR1190442
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588604
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640707
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR6865599
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1188181
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1187186
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1187028
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1187393
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR5917755
|
Sensitive
|
lineage4.1.2
|
by
|
SRR1640343
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR6866027
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640294
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588570
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588584
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588595
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588598
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588614
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588560
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640541
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1188130
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR2184307
|
Sensitive
|
lineage4.1.2
|
pe
|
SRR9588575
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1188174
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR5341216
|
HR-TB
|
lineage3;lineage4.1.2
|
in
|
SRR1187380
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1187195
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1188183
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588574
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588585
|
Sensitive
|
lineage4.1.2
|
None
|
ERR6866199
|
MDR-TB
|
lineage4.1.2
|
None
|
SRR1640540
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1188175
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1188137
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1188121
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR4024691
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1186316
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR4813379
|
HR-TB
|
lineage4.1.2
|
None
|
SRR1190474
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640547
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR26112212
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588578
|
Sensitive
|
lineage4.1.2
|
None
|
ERR4812477
|
Sensitive
|
lineage4.1.2
|
pe
|
ERR3287344
|
Sensitive
|
lineage4.1.2
|
pe
|
SRR1187295
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR4025083
|
Sensitive
|
lineage4.1.2
|
None
|
ERR4024858
|
Sensitive
|
lineage4.1.2
|
None
|
SRR6398063
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588603
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640254
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588611
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640347
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR28394126
|
Sensitive
|
lineage4.1.2
|
None
|
SRR28393833
|
Sensitive
|
lineage4.1.2;lineage4.8
|
None
|
SRR1640567
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1188339
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR5341217
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1188085
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640750
|
Other
|
|
None
|
ERR4812726
|
Other
|
lineage4.1.2
|
pe
|
SRR9588566
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588586
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1187946
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1187630
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1200251
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640336
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR10808667
|
Sensitive
|
lineage4.1.2
|
None
|
ERR6865552
|
Sensitive
|
lineage4.1.2
|
None
|
ERR6865945
|
Sensitive
|
lineage4.1.2
|
None
|
ERR6865531
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1187001
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1188170
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR6866503
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1190473
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1191727
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640290
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR3287362
|
Sensitive
|
lineage4.1.2
|
pe
|
SRR9588605
|
Sensitive
|
lineage4.1.2
|
None
|
SRR28393665
|
MDR-TB
|
lineage4.1.2
|
None
|
ERR4024688
|
Sensitive
|
lineage4.1.2
|
None
|
ERR4024529
|
Other
|
lineage4.1.2
|
None
|
SRR1190475
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588561
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588563
|
HR-TB
|
lineage4.1.2
|
None
|
ERR4024941
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1188284
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1187627
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588580
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1188119
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588557
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588572
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1188359
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR21658562
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588577
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640542
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640342
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1187983
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1367199
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1188492
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1188084
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR6865525
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1188133
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1188286
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1187252
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588571
|
Sensitive
|
lineage4.1.2
|
None
|
SRR28859706
|
Sensitive
|
lineage4.1.2
|
None
|
ERR386989
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1187619
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588587
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640340
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR3287716
|
MDR-TB
|
lineage4.1.2
|
pe
|
SRR1640291
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR3287320
|
Sensitive
|
lineage4.1.2
|
pe
|
ERR775349
|
Sensitive
|
lineage4.1.2
|
pe
|
ERR4024949
|
Sensitive
|
lineage4.1.2
|
None
|
SRR10808488
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1187196
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR6866918
|
Other
|
lineage4.1.2
|
None
|
SRR1640710
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588582
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588612
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640565
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1186993
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588602
|
Sensitive
|
lineage4.1.2
|
None
|
ERR11043253
|
Sensitive
|
lineage4.1.2
|
None
|
ERR4024539
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640551
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR10808517
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1188259
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1188082
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588590
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1191277
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1187088
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640543
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588583
|
Sensitive
|
lineage4.1.2
|
None
|
ERR4812269
|
Sensitive
|
lineage4.1.2
|
None
|
ERR2184356
|
Sensitive
|
lineage4.1.2
|
None
|
ERR4178176
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588569
|
Sensitive
|
lineage4.1.2
|
None
|
ERR4812324
|
Sensitive
|
lineage4.1.2
|
pe
|
SRR1187423
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588567
|
Sensitive
|
lineage4.1.2
|
None
|
SRR19276604
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640334
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1187945
|
Other
|
lineage4.1.2
|
ca
|
ERR2512515
|
Sensitive
|
lineage4.1.2
|
gb
|
SRR9588559
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588588
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1187631
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR29356691
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588555
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588591
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640712
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640564
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR29053513
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588600
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1187086
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR6865729
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640708
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640563
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR4812400
|
Sensitive
|
lineage4.1.2
|
pe
|
ERR6865529
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588576
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588601
|
Sensitive
|
lineage4.1.2
|
None
|
ERR6866689
|
Sensitive
|
lineage4.1.2
|
None
|
ERR4025130
|
Sensitive
|
lineage4.1.2;lineage4.1.4
|
None
|
SRR1188439
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR3287759
|
MDR-TB
|
lineage4.1.2
|
pe
|
SRR1640246
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640316
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1187598
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640326
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1190434
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR4024812
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR9588597
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588606
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640327
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1188487
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588581
|
Sensitive
|
lineage4.1.2
|
None
|
ERR4024952
|
Sensitive
|
lineage4.1.2
|
None
|
ERR4025106
|
Sensitive
|
lineage4.1.2
|
None
|
SRR9588565
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1190480
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR6865932
|
Sensitive
|
lineage4.1.2;lineage4.1.4
|
None
|
SRR9588589
|
Sensitive
|
lineage4.1.2
|
None
|
SRR19317583
|
Sensitive
|
lineage4.1.2
|
None
|
SRR3732682
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1187633
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640250
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR26112029
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1187082
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640253
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588562
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1187576
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588553
|
Sensitive
|
lineage4.1.2
|
None
|
ERR4813524
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640539
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1187085
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1188083
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1187629
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640349
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588593
|
Sensitive
|
lineage4.1.2
|
None
|
ERR3287380
|
Sensitive
|
lineage4.1.2
|
pe
|
SRR28859724
|
Sensitive
|
lineage4.1.2
|
None
|
ERR6865503
|
Sensitive
|
lineage4.1.2
|
None
|
ERR4025078
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640749
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640287
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR4812166
|
Sensitive
|
lineage4.1.2
|
pe
|
SRR9588599
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1188479
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR6865901
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR1188127
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1188138
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR4024551
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640348
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640574
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640709
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1188143
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588558
|
Sensitive
|
lineage4.1.2
|
None
|
ERR4812259
|
Sensitive
|
lineage4.1.2
|
None
|
SRR22528560
|
Sensitive
|
lineage4.1.2
|
None
|
ERR1465729
|
Sensitive
|
lineage4.1.2
|
None
|
ERR550695
|
Sensitive
|
lineage4.1.2
|
de
|
SRR6398074
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640242
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588579
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1188131
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1191547
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR4024978
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640714
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1187620
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1187297
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR4812694
|
Sensitive
|
lineage4.1.2
|
pe
|
SRR1191546
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1188188
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588592
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640562
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR6866490
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1188220
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR4813225
|
Sensitive
|
lineage4.1.2
|
pe
|
SRR1640266
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR6865470
|
Other
|
lineage4.1.2.1
|
None
|
SRR1190477
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588554
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1187089
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR4813540
|
Sensitive
|
lineage4.1.2
|
pe
|
SRR1187628
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1187618
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640321
|
Sensitive
|
lineage4.1.2
|
None
|
ERR4811995
|
Sensitive
|
lineage4.1.2
|
pe
|
SRR1640752
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR6865551
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1640335
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR9588568
|
Sensitive
|
lineage4.1.2
|
None
|
SRR28394155
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1190468
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR2184517
|
Sensitive
|
lineage4.1.2
|
pe
|
SRR1640338
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640751
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR13261620
|
XDR-TB
|
lineage4.1.2
|
None
|
ERR4024998
|
Sensitive
|
lineage4.1.2;lineage4.3.2
|
None
|
ERR4813545
|
Sensitive
|
lineage4.1.2
|
pe
|
ERR6866267
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1188086
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1640292
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR4025064
|
Sensitive
|
lineage4.1.2
|
None
|
ERR2199858
|
Sensitive
|
lineage4.1.2
|
de
|
SRR10808415
|
Other
|
lineage4.1.2.1;lineage4.3.3
|
None
|
ERR6865534
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1187183
|
HR-TB
|
lineage4.1.2
|
ca
|
SRR9588564
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1188087
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1187251
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1188341
|
Sensitive
|
lineage4.1.2
|
ca
|
SRR1367200
|
Sensitive
|
lineage4.1.2
|
ca
|
ERR2184491
|
Sensitive
|
lineage4.1.2
|
pe
|