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SRA data
Rv1173
- c.2565_*55delGGCCTAGCCCCGGCGACGATGCCGGGTCGCGGGATGCGGCCCGTTGAGGAGCGGGGCAATCT
Drug resistance types
0 Sensitive
8 RR-TB
18 HR-TB
47 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
576 Other
lineage Counts
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lineage
Count
lineage
Count
La1.8.1
188
lineage4.3.4.2
71
La1.7.1
51
lineage3
50
lineage4.5
43
lineage4.6.2.2
26
lineage4.3.4.2.1
22
lineage4.3.3
20
lineage2.2.1
16
La1.2.BCG
15
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
658
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR130106
Pre-XDR-TB
lineage4.5
None
DRR188591
Other
lineage4.5
None
DRR188749
Other
lineage2.2.1
None
DRR188782
Other
lineage4.3.3
None
DRR188810
Other
lineage2.2.1
None
DRR188917
Other
lineage4.3.4.2
None
DRR189066
HR-TB
lineage4.5
None
DRR261073
Other
lineage4.1
None
DRR261094
Other
lineage1.1.1.1
None
DRR261117
Other
lineage4.1
None
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