Rv1644 - c.-90C>T
Drug resistance types
12 Sensitive
0 RR-TB
8 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2;lineage4.9 | 2 |
| lineage4.9 | 16 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 26 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None |
| ERR926156 | Sensitive | lineage4.9 | None |
| ERR926155 | Sensitive | lineage4.9 | None |
| ERR926157 | Sensitive | lineage4.9 | None |
| ERR3797029 | Other | lineage4.9 | None |
| ERR926162 | Sensitive | lineage4.9 | None |
| ERR926160 | Sensitive | lineage4.9 | None |
| ERR926163 | Other | lineage4.9 | None |
| ERR926159 | Sensitive | lineage4.9 | None |
| ERR926164 | Other | lineage4.9 | None |
| ERR926165 | Sensitive | lineage4.9 | None |
| ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None |
| SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| ERR4188247 | HR-TB | lineage4.9 | None |
| ERR926158 | Sensitive | lineage4.9 | None |
| ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None |
| ERR1063846 | HR-TB | lineage4.9 | None |
| ERR926161 | Sensitive | lineage4.9 | None |
| ERR212121 | HR-TB | lineage4.9;lineage6.3 | None |
| ERR926154 | Sensitive | lineage4.9 | None |
| ERR971389 | Sensitive | lineage4.9 | None |
| SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None |
| ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
| ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None |
