Rv1854c - c.-184C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
154 Sensitive
19 RR-TB
6 HR-TB
24 MDR-TB
4 Pre-XDR-TB
3 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 198 |
| lineage2.2.1;lineage4.1.1 | 2 |
| lineage2.2.1;lineage4.3.4.2.1 | 4 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4.1.2 | 1 |
| lineage2.2.1;lineage4 | 2 |
| La2;lineage2.2 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage2.2.1;lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 211 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1063867 | Sensitive | lineage2.2.1 | None | SRR29055927 | MDR-TB | lineage2.2.1 | None | ERR10610167 | RR-TB | lineage2.2.1 | None | ERR2515129 | Sensitive | lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR736808 | Sensitive | lineage2.2.1 | None | ERR473304 | Sensitive | lineage2.2.1 | None | ERR228192 | Sensitive | lineage2.2.1 | None | SRR832998 | Sensitive | lineage2.2.1 | None | SRR6855728 | Sensitive | lineage2.2.1;lineage4.1.1 | None | SRR9971330 | Sensitive | lineage2.2.1 | None | ERR10748176 | MDR-TB | lineage2.2.1 | None | ERR11488388 | RR-TB | lineage2.2.1 | None | ERR10748236 | MDR-TB | lineage2.2.1 | None | SRR2101308 | Sensitive | lineage2.2.1 | None | SRR6856012 | Sensitive | lineage2.2.1 | None | SRR9971115 | Sensitive | lineage2.2.1 | None | ERR221659 | Sensitive | lineage2.2.1;lineage4.3.4.2.1 | None | SRR1019136 | Pre-XDR-TB | lineage2.2.1 | None | SRR6855939 | Sensitive | lineage2.2.1 | None | SRR29055603 | MDR-TB | lineage2.2.1 | None | ERR163990 | Sensitive | lineage2.2.1 | mw | ERR190368 | Sensitive | lineage2.2.1 | mw | ERR221536 | Sensitive | lineage2.2.1;lineage4.9 | mw | ERR221553 | Sensitive | lineage2.2.1 | mw | SRR6855886 | Sensitive | lineage2.2.1 | None | ERR11811394 | Sensitive | lineage2.2.1 | None | SRR9971006 | Sensitive | lineage2.2.1 | None | SRR6855740 | Sensitive | lineage2.2.1 | None | SRR9971304 | Sensitive | lineage2.2.1 | None | ERR11774971 | RR-TB | lineage2.2.1 | None | SRR6855709 | Sensitive | lineage2.2.1 | None | SRR6855964 | HR-TB | lineage2.2.1 | None | SRR6856078 | Sensitive | lineage2.2.1 | None | ERR4809218 | Sensitive | lineage2.2.1 | za | ERR11775353 | Sensitive | lineage2.2.1 | None | ERR2515309 | Sensitive | lineage2.2.1 | None | ERR4830476 | Sensitive | lineage2.2.1 | None | ERR2515297 | Sensitive | lineage2.2.1 | None | SRR6855819 | Sensitive | lineage2.2.1 | None | ERR8975211 | Sensitive | lineage2.2.1 | None | ERR7737805 | MDR-TB | lineage2.2.1 | None | SRR10315557 | Sensitive | lineage2.2.1 | None | SRR2101309 | HR-TB | lineage2.2.1 | None | SRR2101335 | Sensitive | lineage2.2.1 | None | SRR2101672 | Sensitive | lineage2.2.1 | None | ERR2515619 | Sensitive | lineage2.2.1 | za | ERR2515279 | Sensitive | lineage2.2.1 | za | ERR2515873 | Sensitive | lineage2.2.1 | za | ERR2515106 | Sensitive | lineage2.2.1 | za | ERR2515149 | Sensitive | lineage2.2.1 | za | ERR2515786 | Sensitive | lineage2.2.1 | za | ERR2515613 | Sensitive | lineage2.2.1;lineage4.1.1 | za | ERR2515223 | RR-TB | lineage2.2.1 | za | ERR2515530 | Sensitive | lineage2.2.1 | za | ERR2515719 | Pre-XDR-TB | lineage2.2.1 | za | ERR553241 | RR-TB | lineage2.2.1 | sz | ERR2200051 | Sensitive | lineage2.2.1 | sz | ERR245831 | Sensitive | lineage2.2.1 | mw | ERR245680 | Sensitive | lineage2.2.1 | mw | ERR245663 | Sensitive | lineage2.2.1 | mw | ERR245710 | Sensitive | lineage2.2.1 | mw | ERR245834 | Sensitive | lineage2.2.1 | mw | ERR245754 | Sensitive | lineage2.2.1;lineage4.1.2 | mw | ERR245655 | Sensitive | lineage2.2.1 | mw | ERR245723 | Sensitive | lineage2.2.1 | mw | ERR221538 | Sensitive | lineage2.2.1 | mw | ERR221542 | Sensitive | lineage2.2.1 | mw | ERR221545 | Sensitive | lineage2.2.1 | mw | ERR221558 | Sensitive | lineage2.2.1 | mw | ERR221574 | Sensitive | lineage2.2.1 | mw | SRR18213672 | Sensitive | lineage2.2.1 | None | SAMN02586028 | RR-TB | lineage2.2.1 | za | ERR221544 | Sensitive | lineage2.2.1 | mw | ERR221603 | Sensitive | lineage2.2.1;lineage4 | mw | ERR221605 | Sensitive | lineage2.2.1 | mw | ERR221632 | Sensitive | lineage2.2.1;lineage4.3.4.2.1 | mw | ERR221634 | Sensitive | lineage2.2.1 | mw | ERR221655 | Sensitive | lineage2.2.1 | mw | ERR221658 | Sensitive | lineage2.2.1 | mw | ERR11252452 | Sensitive | lineage2.2.1 | None | SRR6856045 | Sensitive | lineage2.2.1 | None | ERR13286054 | MDR-TB | lineage2.2.1 | None | ERR2515987 | Sensitive | lineage2.2.1 | za | SRR1180273 | Sensitive | lineage2.2.1 | None | ERR9806840 | RR-TB | lineage2.2.1 | None | SRR1175030 | RR-TB | lineage2.2.1 | None | SRR1019132 | Sensitive | lineage2.2.1 | None | SRR6982236 | Sensitive | lineage2.2.1 | None | ERR9806839 | MDR-TB | lineage2.2.1 | None | SRR10869149 | Sensitive | lineage2.2.1 | None | ERR9119982 | MDR-TB | lineage2.2.1 | None | ERR10610185 | RR-TB | lineage2.2.1 | None | SRR6896200 | Sensitive | lineage2.2.1 | None | SRR6856037 | Sensitive | lineage2.2.1 | None | ERR13260457 | HR-TB | lineage2.2.1 | None | SRR6855716 | Sensitive | lineage2.2.1 | None | ERR9992872 | XDR-TB | lineage2.2.1 | None | SRR6856054 | Sensitive | lineage2.2.1 | None | SRR6896341 | Sensitive | lineage2.2.1 | None | SRR9971219 | RR-TB | lineage2.2.1 | None | SRR6896363 | Sensitive | lineage2.2.1 | None | SRR10315548 | Sensitive | lineage2.2.1 | None | SRR29093395 | Sensitive | lineage2.2.1 | None | ERR2516032 | Sensitive | lineage2.2.1 | None | ERR7821223 | Sensitive | lineage2.2.1 | None | ERR9992821 | XDR-TB | lineage2.2.1 | None | SRR10315549 | Sensitive | lineage2.2.1 | None | SRR832984 | Sensitive | lineage2.2.1 | None | ERR8975653 | MDR-TB | lineage2.2.1 | None | ERR8975408 | Sensitive | lineage2.2.1;lineage4 | None | ERR2515888 | Sensitive | lineage2.2.1 | za | ERR2515771 | Sensitive | lineage2.2.1 | za | ERR2516011 | HR-TB | lineage2.2.1 | za | ERR2515291 | Sensitive | lineage2.2.1 | za | ERR2515689 | Sensitive | lineage2.2.1 | za | ERR2515853 | Sensitive | lineage2.2.1 | za | ERR2515517 | Sensitive | lineage2.2.1 | za | SRR2101456 | Sensitive | lineage2.2.1 | None | ERR216958 | Sensitive | lineage2.2.1 | mw | ERR181821 | Sensitive | lineage2.2.1 | mw | ERR181916 | Sensitive | lineage2.2.1 | mw | ERR181918 | Sensitive | lineage2.2.1 | mw | ERR190401 | Sensitive | lineage2.2.1 | mw | ERR221628 | Sensitive | lineage2.2.1 | mw | ERR221630 | Sensitive | lineage2.2.1 | mw | ERR221629 | Sensitive | lineage2.2.1 | mw | ERR221633 | Sensitive | lineage2.2.1 | mw | ERR221652 | Sensitive | lineage2.2.1;lineage4.3.4.2.1 | mw | ERR323119 | Sensitive | lineage2.2.1 | mw | ERR2660484 | Sensitive | lineage2.2.1 | None | ERR11489051 | MDR-TB | lineage2.2.1 | None | ERR7737783 | MDR-TB | lineage2.2.1 | None | ERR2515418 | Sensitive | lineage2.2.1 | None | SRR9971208 | Sensitive | lineage2.2.1 | None | ERR2515190 | Sensitive | lineage2.2.1 | za | ERR2515845 | Sensitive | lineage2.2.1 | za | ERR2515661 | MDR-TB | lineage2.2.1 | za | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR6855813 | Sensitive | lineage2.2.1 | None | SRR1196724 | RR-TB | lineage2.2.1 | None | ERR7737828 | RR-TB | lineage2.2.1 | None | SRR1180434 | Sensitive | lineage2.2.1 | None | ERR773792 | Sensitive | lineage2.2.1 | None | ERR7821170 | Sensitive | lineage2.2.1 | None | SRR10315559 | Sensitive | lineage2.2.1 | None | SRR1140964 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748226 | MDR-TB | lineage2.2.1 | None | ERR245846 | Sensitive | lineage2.2.1 | None | ERR5987287 | MDR-TB | lineage2.2.1 | None | SRR6856118 | Sensitive | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR11811436 | Sensitive | lineage2.2.1 | None | ERR11252604 | Sensitive | lineage2.2.1 | None | ERR7737948 | MDR-TB | lineage2.2.1 | None | ERR9806832 | RR-TB | lineage2.2.1 | None | SRR10315527 | Sensitive | lineage2.2.1 | None | SRR6982251 | RR-TB | lineage2.2.1 | None | SRR10315489 | Sensitive | lineage2.2.1 | None | ERR9992656 | XDR-TB | lineage2.2.1 | None | SRR10315528 | Sensitive | lineage2.2.1;lineage4.1.2.1 | None | ERR10748227 | MDR-TB | lineage2.2.1 | None | SRR6855867 | Sensitive | lineage2.2.1;lineage4.3.2.1 | None | ERR2515305 | Sensitive | lineage2.2.1 | None | ERR13292507 | MDR-TB | lineage2.2.1 | None | ERR221656 | Sensitive | lineage2.2.1;lineage4.3.4.2.1 | None | SRR6856042 | Sensitive | lineage2.2.1 | None | ERR4830539 | MDR-TB | lineage2.2.1 | None | ERR221604 | Sensitive | lineage2.2.1 | None | ERR4809191 | Other | lineage2.2.1 | za | ERR4809029 | Sensitive | lineage2.2.1 | za | ERR11252422 | Sensitive | lineage2.2.1 | None | ERR245716 | Sensitive | lineage2.2.1 | None | SRR6856014 | Sensitive | lineage2.2.1 | None | ERR8975067 | Sensitive | lineage2.2.1 | None | ERR8975366 | Sensitive | lineage2.2.1 | None | ERR8975833 | Sensitive | lineage2.2.1 | None | ERR2515657 | Sensitive | lineage2.2.1 | None | SRR2100549 | Sensitive | lineage2.2.1 | None | SRR9971265 | RR-TB | lineage2.2.1 | None | ERR181769 | Sensitive | lineage2.2.1 | mw | SRR6896347 | HR-TB | lineage2.2.1 | None | ERR212126 | Sensitive | lineage2.2.1 | mw | ERR212120 | Sensitive | lineage2.2.1 | mw | SAMN02053780 | Sensitive | lineage2.2.1 | za | SAMN02350458 | Sensitive | lineage2.2.1 | za | SAMN02350462 | Pre-XDR-TB | lineage2.2.1 | za | SAMN02585956 | Sensitive | lineage2.2.1 | za | SRR6856123 | HR-TB | lineage2.2.1 | None | ERR10610104 | MDR-TB | lineage2.2.1 | None | ERR8774567 | MDR-TB | lineage2.2.1 | None | SRR9971220 | RR-TB | lineage2.2.1 | None | SRR1140900 | Sensitive | lineage2.2.1 | None | SRR6855719 | Sensitive | lineage2.2.1 | None | SRR6982212 | Sensitive | lineage2.2.1 | None | SRR1184018 | Sensitive | lineage2.2.1 | None | SRR6207273 | Sensitive | lineage2.2.1 | None | ERR13260773 | Sensitive | lineage2.2.1 | None | SRR6855924 | Sensitive | lineage2.2.1 | None | ERR13289039 | RR-TB | lineage2.2.1 | None | ERR13260776 | Sensitive | lineage2.2.1 | None | SRR1180991 | Sensitive | lineage2.2.1 | None | ERR9992788 | RR-TB | lineage2.2.1 | None | ERR9993248 | RR-TB | lineage2.2.1 | None | ERR2515823 | Sensitive | lineage2.2.1 | None | SRR6855712 | Sensitive | lineage2.2.1 | None | ERR10748183 | MDR-TB | lineage2.2.1 | None | SRR6856000 | Sensitive | lineage2.2.1 | None | SRR9971015 | Sensitive | lineage2.2.1 | None | ERR7737892 | MDR-TB | lineage2.2.1 | None | SRR6855742 | Sensitive | lineage2.2.1 | None |
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