Rv1918c - c.1335T>C
Drug resistance types
170 Sensitive
9 RR-TB
29 HR-TB
21 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 161 |
| 2 | |
| lineage4.3.3 | 5 |
| lineage4.4.1.1 | 7 |
| lineage2.2.1 | 13 |
| lineage2.2.1.1 | 3 |
| lineage4.3.3;lineage2.2.1 | 1 |
| lineage4.3.4.2 | 4 |
| lineage4.2.2.2 | 4 |
| lineage4.2.1 | 3 |
| lineage4.7 | 1 |
| lineage2.2.2 | 1 |
| lineage1.1.3.1 | 2 |
| lineage1 | 1 |
| lineage4.1.2;lineage2.2.1 | 1 |
| La1.2 | 2 |
| La1.7 | 1 |
| lineage1.1.1 | 1 |
| La1.7.X-unk4 | 1 |
| lineage3.1 | 1 |
| lineage3 | 10 |
| lineage4 | 25 |
| lineage1.2.2.2 | 2 |
| lineage4.1.2.1 | 7 |
| lineage4.2.2 | 1 |
| lineage4.9 | 1 |
| lineage3.1.1 | 3 |
| La1.8.1 | 1 |
| lineage4.1.4 | 1 |
| lineage1.1.2 | 1 |
| lineage6 | 1 |
| lineage5.1.4 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.3.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 275 |
Geographic prevalence
Country level data for this variant is available for 52 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6785216 | Sensitive | lineage4.8 | None | SRR6785234 | HR-TB | lineage4.8 | None | SRR6785230 | HR-TB | None | SRR6785420 | Sensitive | lineage4.3.3 | None | SRR8420473 | Sensitive | lineage4.4.1.1 | None | ERR4831873 | MDR-TB | lineage2.2.1 | vn | ERR4831894 | MDR-TB | lineage2.2.1.1 | None | SRR998855 | Sensitive | lineage4.3.3;lineage2.2.1 | None | SRR8420472 | Sensitive | lineage4.4.1.1 | None | ERR4132456 | MDR-TB | lineage2.2.1 | None | SRR998858 | Pre-XDR-TB | lineage2.2.1 | None | ERR9786665 | Other | lineage4.8 | None | ERR9121800 | Other | lineage4.3.4.2 | None | ERR4195238 | Other | lineage4.3.4.2 | None | ERR4407453 | HR-TB | lineage4.2.2.2 | None | ERR5865156 | Pre-XDR-TB | lineage2.2.1 | None | ERR9285885 | Sensitive | lineage4.4.1.1 | None | SRR1002691 | HR-TB | lineage4.2.1 | None | ERR9892005 | HR-TB | lineage4.7 | None | SRR1002685 | HR-TB | lineage4.3.3 | None | SRR1002698 | Sensitive | lineage4.8 | None | SRR1002695 | Sensitive | lineage2.2.1 | None | SRR1002693 | MDR-TB | lineage4.3.3 | None | SRR10272563 | RR-TB | lineage4.4.1.1 | None | SRR10272570 | Sensitive | lineage4.4.1.1 | None | SRR11972171 | RR-TB | lineage2.2.2 | None | SRR10272574 | Sensitive | lineage4.4.1.1 | None | SRR10305772 | Sensitive | lineage2.2.1 | None | SRR1166876 | MDR-TB | lineage4.2.2.2 | None | SRR11972166 | Sensitive | lineage1.1.3.1 | None | SRR11972163 | Sensitive | lineage1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11972382 | Sensitive | lineage4.1.2;lineage2.2.1 | None | SRR12199426 | Sensitive | lineage1.1.3.1 | None | SRR11972416 | MDR-TB | lineage2.2.1.1 | None | SRR13986567 | Other | La1.2 | None | SRR13986560 | Other | La1.7 | None | SRR12199469 | Sensitive | lineage1.1.1 | None | SRR13986565 | Other | La1.7.X-unk4 | None | SRR13986568 | Other | La1.2 | None | SRR14088361 | MDR-TB | lineage3.1 | None | SRR14088349 | Pre-XDR-TB | lineage3 | None | SRR14088384 | MDR-TB | lineage3 | None | SRR14088367 | MDR-TB | lineage3 | None | SRR14088366 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR14088364 | MDR-TB | lineage3 | None | ERR2229534 | Sensitive | lineage4.8 | dk | SRR14088395 | MDR-TB | lineage3 | None | SRR3675476 | Other | lineage4 | None | SRR3082083 | MDR-TB | lineage1.2.2.2 | None | ERR4814437 | Other | lineage4.1.2.1 | None | ERR4815043 | Sensitive | lineage4.1.2.1 | None | ERR2229531 | Sensitive | lineage4.8 | None | SRR1723823 | Sensitive | lineage2.2.1 | cn | ERR2228921 | Sensitive | lineage4.8 | dk | ERR2229541 | Other | lineage4.8 | None | ERR2228948 | Sensitive | lineage4.8 | None | ERR4815883 | Sensitive | lineage4.1.2.1 | None | ERR2228946 | Sensitive | lineage4.8 | dk | ERR2229544 | Sensitive | lineage4.8 | None | ERR2228985 | Sensitive | lineage4 | None | ERR2229015 | Sensitive | lineage4.8 | dk | ERR2229005 | Sensitive | lineage4.8 | None | ERR2229010 | Sensitive | lineage4 | None | ERR2229041 | HR-TB | lineage4.8 | None | ERR2229028 | Sensitive | lineage4.8 | None | ERR1950027 | Sensitive | lineage4.8 | None | ERR2229052 | Sensitive | lineage4.8 | None | ERR2229040 | Sensitive | lineage4 | None | ERR2229027 | Sensitive | lineage4.8 | None | ERR2229038 | Sensitive | lineage4.8 | None | ERR2229745 | HR-TB | lineage4.8 | None | ERR2229046 | Sensitive | lineage4.8 | dk | ERR2229057 | HR-TB | lineage4 | None | ERR2229561 | Sensitive | lineage4.8 | None | ERR2229063 | Sensitive | lineage4.8 | dk | ERR2229575 | Sensitive | lineage4.8 | None | ERR2229813 | Sensitive | lineage4.8 | None | ERR2229082 | Sensitive | lineage4.8 | None | ERR2229086 | Sensitive | lineage4.8 | None | ERR2229091 | Sensitive | lineage4.8 | None | ERR2229092 | Other | lineage4.8 | None | ERR2229096 | Sensitive | lineage4 | None | ERR4816204 | Sensitive | lineage4.2.2 | None | ERR2229103 | Sensitive | lineage4.8 | None | ERR2229098 | Sensitive | lineage4.8 | None | ERR2229108 | Sensitive | lineage4.8 | dk | ERR2229110 | Sensitive | lineage4.8 | None | ERR2229109 | Sensitive | lineage4.8 | None | ERR2229107 | Sensitive | lineage4 | None | ERR2229748 | RR-TB | lineage4 | None | ERR2229122 | Sensitive | lineage4.8 | None | ERR2229135 | Sensitive | lineage4.8 | None | ERR2229130 | Sensitive | lineage4.8 | None | ERR2229744 | Sensitive | lineage4.8 | None | ERR2229147 | Other | lineage4.8 | None | ERR2229141 | Other | lineage4 | None | ERR2229142 | HR-TB | lineage4.8 | None | ERR2229584 | Other | lineage4.8 | None | ERR2229587 | Sensitive | lineage4.8 | None | ERR2229126 | Sensitive | lineage4.8 | dk | ERR2229154 | Sensitive | lineage4.8 | None | ERR2229155 | HR-TB | lineage4.8 | None | ERR2229152 | Sensitive | lineage4.8 | None | ERR2229158 | Sensitive | lineage4 | None | ERR2229112 | Sensitive | lineage4.8 | dk | ERR2229156 | Sensitive | lineage4.8 | None | ERR2229589 | HR-TB | lineage4.8 | None | ERR2229168 | Other | lineage4 | None | ERR2229165 | Sensitive | lineage4 | None | ERR2229592 | Sensitive | lineage4.8 | None | ERR2229177 | Sensitive | lineage4 | None | ERR2229594 | Other | lineage4 | None | ERR2229159 | Sensitive | lineage4.8 | None | ERR2229180 | Other | lineage4 | None | ERR2229171 | Sensitive | lineage4 | None | ERR2229188 | Sensitive | lineage4.8 | None | ERR2229762 | HR-TB | lineage4.8 | None | ERR2229175 | Other | lineage4.8 | None | ERR2229600 | Sensitive | lineage4.8 | None | ERR2229179 | HR-TB | lineage4.8 | None | ERR2229766 | Sensitive | lineage4.8 | None | ERR2229605 | Sensitive | lineage4.8 | None | ERR2229201 | Sensitive | lineage4.8 | dk | ERR2229190 | Sensitive | lineage4.8 | None | ERR2229751 | Sensitive | lineage4.8 | None | ERR2229200 | Sensitive | lineage4.8 | None | ERR2229608 | HR-TB | lineage4.8 | None | ERR2229768 | Sensitive | lineage4 | None | ERR2229764 | HR-TB | lineage4.8 | None | ERR2229595 | RR-TB | lineage4.8 | dk | ERR2229598 | Sensitive | lineage4.8 | dk | ERR2229231 | RR-TB | lineage4.8 | None | ERR2229228 | HR-TB | lineage4.8 | None | SRR3732650 | MDR-TB | lineage4.3.3 | None | ERR2229232 | HR-TB | lineage4.8 | None | ERR2229243 | Sensitive | lineage4.8 | None | ERR2229735 | Sensitive | lineage4.8 | dk | ERR2229237 | Sensitive | lineage4.8 | None | ERR2229242 | Sensitive | lineage4.8 | dk | ERR2229628 | Sensitive | lineage4.8 | None | ERR2229765 | Sensitive | lineage4.8 | dk | ERR2229210 | Sensitive | lineage4.8 | dk | ERR2229631 | Sensitive | lineage4.8 | None | ERR2229255 | Sensitive | lineage4.8 | dk | ERR2229633 | Sensitive | lineage4.8 | None | ERR2229639 | Sensitive | lineage4.8 | dk | ERR2229290 | Sensitive | lineage4.8 | None | ERR2229294 | Other | lineage4.8 | None | ERR2229646 | Sensitive | lineage4.8 | dk | ERR2229252 | Sensitive | lineage4.8 | dk | ERR2229258 | Sensitive | lineage4.8 | dk | ERR2229260 | Sensitive | lineage4.8 | dk | ERR2229626 | Sensitive | lineage4.8 | dk | ERR2229254 | Sensitive | lineage4.8 | dk | ERR2229638 | Sensitive | lineage4.8 | None | ERR2229295 | Sensitive | lineage4.8 | dk | ERR2229305 | Sensitive | lineage4.8 | None | ERR2229310 | Sensitive | lineage4.8 | dk | ERR2229313 | Sensitive | lineage4.8 | None | ERR2229327 | Sensitive | lineage4.8 | dk | ERR2229657 | Sensitive | lineage4.8 | None | ERR2229320 | Sensitive | lineage4.8 | None | ERR2229319 | Sensitive | lineage4.8 | dk | ERR2229318 | Sensitive | lineage4.8 | dk | ERR2229662 | Sensitive | lineage4.8 | dk | ERR2229353 | Sensitive | lineage4.8 | dk | ERR2229343 | Sensitive | lineage4.8 | dk | ERR2229344 | Sensitive | lineage4.8 | dk | ERR2229360 | Other | lineage4.8 | None | ERR2229659 | Sensitive | lineage4.8 | None | ERR2229359 | Other | lineage4.8 | dk | ERR2229380 | Sensitive | lineage4.8 | None | ERR2229368 | Sensitive | lineage4.8 | None | ERR2229374 | Sensitive | lineage4.8 | None | ERR2229372 | Sensitive | lineage4.8 | dk | ERR2229376 | Other | lineage4.8 | None | ERR2229370 | Sensitive | lineage4.8 | None | ERR2229381 | Sensitive | lineage4.8 | None | ERR2229377 | Other | lineage4.8 | None | ERR2229679 | Sensitive | lineage4.8 | dk | ERR2229391 | Other | lineage4.8 | None | ERR2229401 | Sensitive | lineage4.8 | None | ERR2229397 | Sensitive | lineage4.8 | None | ERR2229400 | Sensitive | lineage4.8 | None | ERR2229398 | Sensitive | lineage4.8 | None | ERR2229415 | Sensitive | lineage4.8 | None | ERR2229394 | Other | lineage4.8 | None | ERR2229405 | Sensitive | lineage4 | None | ERR2229414 | Sensitive | lineage4.8 | None | ERR2229399 | Sensitive | lineage4.8 | None | ERR2229402 | Sensitive | lineage4.8 | None | ERR2229802 | Sensitive | lineage4.8 | None | ERR2229424 | Sensitive | lineage4.8 | None | ERR2229693 | HR-TB | lineage4 | None | ERR2229698 | RR-TB | lineage4.8 | None | ERR2229428 | Sensitive | lineage4.8 | None | ERR2229701 | Sensitive | lineage4.8 | None | ERR2229440 | Sensitive | lineage4.8 | None | ERR2229466 | Sensitive | lineage4.8 | dk | ERR2229707 | Sensitive | lineage4.8 | None | ERR2229438 | Sensitive | lineage4.8 | None | ERR2229452 | Sensitive | lineage4.8 | None | ERR2229489 | HR-TB | lineage4.8 | None | ERR2229711 | Sensitive | lineage4.8 | None | ERR2229486 | Other | lineage4.8 | None | ERR2229499 | Sensitive | lineage4 | None | ERR2229495 | Sensitive | lineage4.8 | dk | ERR2229494 | HR-TB | lineage4.8 | None | ERR2229485 | Sensitive | lineage4.8 | None | ERR2228817 | Sensitive | lineage4 | None | ERR2228823 | Sensitive | lineage4 | None | ERR2229483 | Sensitive | lineage4.8 | None | ERR2229501 | HR-TB | lineage4.9 | None | ERR2229487 | Sensitive | lineage4.8 | None | ERR2229504 | Sensitive | lineage4.8 | None | ERR2229505 | Other | lineage4.8 | None | ERR2229729 | Sensitive | lineage4 | None | ERR2229726 | Sensitive | lineage4.8 | None | ERR2229724 | Other | lineage4 | None | ERR2228871 | Sensitive | lineage4.8 | dk | ERR2228868 | Sensitive | lineage4.8 | None | ERR2229512 | Sensitive | lineage4.8 | None | ERR2229497 | Sensitive | lineage4.8 | None | ERR2229500 | Sensitive | lineage4.8 | None | ERR2228883 | Sensitive | lineage4.8 | dk | ERR2228899 | RR-TB | lineage4.8 | None | ERR2229519 | Sensitive | lineage4.8 | None | ERR2229731 | Sensitive | lineage4.8 | None | ERR2228896 | Sensitive | lineage4.8 | dk | ERR2229737 | HR-TB | lineage4.8 | None | ERR2228916 | Sensitive | lineage4.8 | dk | ERR2245286 | HR-TB | lineage3.1.1 | None | ERR2229523 | Sensitive | lineage4.8 | None | ERR4818387 | Sensitive | lineage4.1.2.1 | None | ERR2245345 | HR-TB | lineage3.1.1 | no | ERR2510812 | Other | lineage4.1.2.1 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818736 | Sensitive | lineage1.2.2.2 | None | ERR4818092 | Other | La1.8.1 | None | ERR2503397 | Sensitive | lineage4.1.4 | fi | ERR4818539 | Other | lineage4.1.2.1 | None | ERR2503516 | Sensitive | lineage1.1.2 | fi | ERR2514261 | Other | lineage3 | None | ERR4818574 | Other | lineage6 | None | ERR2513717 | Other | lineage2.2.1 | None | ERR4820266 | RR-TB | lineage3 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2513328 | Sensitive | lineage4.6.2.2 | gb | ERR2510404 | MDR-TB | lineage3 | None | ERR2513758 | Sensitive | lineage4.3.1.1 | None | ERR2513895 | Sensitive | lineage4.8 | None | ERR4819378 | Other | lineage4.8 | None | ERR2515032 | Other | lineage3 | None | ERR2517058 | Sensitive | lineage3 | None | ERR4821823 | Sensitive | lineage1.2.1.2.1 | None | ERR4820622 | Other | lineage4.3.4.2 | None | SRR5526782 | MDR-TB | lineage2.2.1.1 | None | ERR4821978 | Sensitive | lineage4 | None | SRR5535698 | Sensitive | lineage4.1.2.1 | None | ERR4830859 | MDR-TB | lineage4.4.1.1 | sz | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6045793 | HR-TB | lineage3.1.1 | None | ERR4829124 | HR-TB | lineage4.6.2.2 | None | ERR4830829 | MDR-TB | lineage4.2.2.2 | et | SRR6256977 | Pre-XDR-TB | lineage2.2.1 | ru | SRR6485140 | Other | lineage4.2.1 | None | SRR6479538 | Other | None | SRR6257062 | Sensitive | lineage4.8 | None | SRR6257068 | Sensitive | lineage2.2.1 | None | SRR6257066 | MDR-TB | lineage4.3.3 | None | SRR6257061 | MDR-TB | lineage2.2.1 | None | SRR6257067 | HR-TB | lineage4.2.1 | None | SRR6484925 | MDR-TB | lineage2.2.1 | None | ERR4831818 | HR-TB | lineage4.4.2 | vn |
|---|
