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SRA data
Rv1918c
- c.1545_1622delGGCGATGACGCCAGCTAACATCACGGTGGGTGCGTTTGATTTGCCGGGGTTGACGGTGCCGTCGTTGACGATTCCAGC
Drug resistance types
328 Sensitive
0 RR-TB
5 HR-TB
0 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.8
319
lineage4.5
5
lineage4.3.2
5
lineage4.1.2
3
lineage1.2.2.2
2
lineage1.2.1.2.1
2
lineage4.3.4.2.1
1
lineage4.3.4.1
1
lineage4.6.2.2
1
lineage4.3.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
343
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR188796
Other
lineage4.5
None
ERR1193689
Sensitive
lineage4.3.4.2.1
sd
ERR1193742
Sensitive
lineage4.3.4.1
pt
ERR13276186
Other
lineage4.5
None
ERR13291582
Sensitive
lineage4.5
None
ERR13291582
Sensitive
lineage4.5
None
ERR2515590
Pre-XDR-TB
lineage4.1.2
za
ERR2515932
Sensitive
lineage4.3.2
za
ERR4195855
Sensitive
lineage4.3.2
None
ERR4195859
Sensitive
lineage4.3.2
None
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