Rv2043c - p.Thr76Pro
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
8 RR-TB
17 HR-TB
397 MDR-TB
201 Pre-XDR-TB
36 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.5 | 20 |
| lineage4.2.2.2 | 51 |
| lineage4.3.3 | 41 |
| lineage2.2.1 | 313 |
| lineage4.3.2 | 16 |
| lineage1.1.3.3 | 3 |
| lineage2.2.1.1 | 7 |
| lineage4.6.4 | 12 |
| lineage3 | 18 |
| lineage4 | 4 |
| lineage2.2.2 | 18 |
| lineage1.1.2 | 10 |
| lineage3.1.2.1 | 2 |
| lineage2.2.1.2 | 6 |
| lineage2.2.1;lineage4.1.2.1 | 4 |
| lineage2.2.2;lineage4 | 1 |
| lineage4.1.2.1 | 15 |
| lineage4.1.1.1 | 2 |
| lineage4.2.2 | 2 |
| lineage4.1.3 | 4 |
| lineage4.7 | 19 |
| lineage4.2.1 | 14 |
| lineage4.2.2.1 | 1 |
| lineage4.8 | 7 |
| lineage4.3.4.2.1 | 4 |
| lineage3.1.1 | 3 |
| lineage4.6.1.2 | 4 |
| lineage4.1.1 | 3 |
| lineage4.1.1.3 | 7 |
| lineage4.1.2 | 2 |
| lineage4.4.2 | 8 |
| lineage4.3.3;lineage4.6.4 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.9 | 3 |
| lineage4.1.2.1;lineage4.3.3 | 1 |
| lineage4.3.4.1 | 4 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage2.2.1;lineage4.1 | 1 |
| lineage1.2.1.2 | 2 |
| lineage4.3.4.2 | 3 |
| lineage2.2.1.1;lineage3 | 1 |
| lineage4.6.2 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.6.2.2 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.1.1 | 2 |
| lineage1.1.2;lineage2.2.1 | 1 |
| lineage4.4 | 1 |
| lineage1.2.2.1 | 2 |
| lineage1.1.1 | 1 |
| lineage2.2.1.1;lineage2.2.1.2;lineage3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage2.1 | 1 |
| lineage5.1.3 | 1 |
| lineage2.2.1.1;lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 659 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR13290971 | MDR-TB | lineage4.5 | None | ERR4011961 | MDR-TB | lineage4.2.2.2 | None | SRR1167378 | MDR-TB | lineage4.3.3 | None | ERR13290988 | Pre-XDR-TB | lineage4.5 | None | SRR12420480 | Pre-XDR-TB | lineage2.2.1 | None | ERR13291060 | Pre-XDR-TB | lineage2.2.1 | None | SRR1167261 | MDR-TB | lineage4.3.2 | None | SRR6384969 | Pre-XDR-TB | lineage2.2.1 | None | SRR7655612 | MDR-TB | lineage2.2.1 | None | ERR13276328 | MDR-TB | lineage2.2.1 | None | ERR16022307 | MDR-TB | lineage2.2.1 | None | ERR13276291 | XDR-TB | lineage4.3.3 | None | ERR16022289 | Pre-XDR-TB | lineage2.2.1 | None | ERR16022294 | MDR-TB | lineage1.1.3.3 | None | SRR26937102 | MDR-TB | lineage2.2.1 | None | SRR28351358 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR1035324 | MDR-TB | lineage4.6.4 | br | ERR4831518 | Pre-XDR-TB | lineage3 | pk | ERR4831510 | Pre-XDR-TB | lineage3 | pk | ERR13284593 | MDR-TB | lineage2.2.1 | None | SRR29289132 | Pre-XDR-TB | lineage2.2.1 | None | ERR16022321 | MDR-TB | lineage1.1.3.3 | None | ERR3132296 | HR-TB | lineage4 | None | SRR28240055 | MDR-TB | lineage2.2.1 | None | ERR13289505 | MDR-TB | lineage2.2.1 | None | SRR1144733 | Pre-XDR-TB | lineage2.2.2 | None | SRR29539245 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797389 | MDR-TB | lineage1.1.2 | in | ERR1035310 | MDR-TB | lineage4.6.4 | br | ERR1035363 | Pre-XDR-TB | lineage4.6.4 | br | ERR13284324 | MDR-TB | lineage2.2.1 | None | SRR29093933 | MDR-TB | lineage2.2.1 | None | SRR29017241 | MDR-TB | lineage1.1.2 | None | SRR18002906 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799017 | MDR-TB | lineage3.1.2.1 | in | ERR7737856 | MDR-TB | lineage4.2.2.2 | None | ERR13276127 | MDR-TB | lineage4.2.2.2 | None | SRR6484856 | MDR-TB | lineage2.2.1 | None | SRR29093116 | MDR-TB | lineage2.2.1 | None | ERR13276389 | XDR-TB | lineage4.3.3 | None | ERR11043586 | MDR-TB | lineage2.2.1 | None | ERR13261617 | MDR-TB | lineage4 | None | ERR4798063 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR10762433 | MDR-TB | lineage2.2.1 | None | SRR1165278 | MDR-TB | lineage4.3.2 | None | SRR21887679 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710166 | MDR-TB | lineage2.2.1 | None | SRR26400028 | HR-TB | lineage2.2.1 | None | SRR29017023 | MDR-TB | lineage2.2.2 | None | SRR1172093 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SAMN02414967 | MDR-TB | lineage2.2.1 | se | SRR25827867 | MDR-TB | lineage2.2.1 | None | SAMN02584606 | MDR-TB | lineage4.3.3 | md | ERR13191369 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811057 | Pre-XDR-TB | lineage2.2.1 | cn | SRR27069450 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173851 | MDR-TB | lineage4.3.2 | None | SRR14801694 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811367 | MDR-TB | lineage2.2.1 | None | SRR1013630 | Pre-XDR-TB | lineage2.2.2;lineage4 | None | ERR3287830 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR28467049 | Pre-XDR-TB | lineage2.2.2 | None | SRR28045435 | MDR-TB | lineage2.2.1.1 | None | SRR27069371 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044341 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR24256024 | MDR-TB | lineage2.2.1 | None | ERR4811333 | MDR-TB | lineage4.2.2 | cn | ERR7911126 | MDR-TB | lineage2.2.1 | vn | ERR4810483 | MDR-TB | lineage2.2.1 | cn | ERR8665929 | MDR-TB | lineage2.2.1 | None | ERR4828871 | MDR-TB | lineage4.2.2.2 | None | ERR7911280 | MDR-TB | lineage2.2.1 | vn | ERR4830403 | HR-TB | lineage2.2.1 | vn | ERR4828843 | MDR-TB | lineage4.2.2.2 | None | ERR8665949 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665873 | MDR-TB | lineage2.2.1 | None | ERR4828868 | MDR-TB | lineage4.2.2.2 | None | ERR4828894 | MDR-TB | lineage4.1.3 | None | ERR4831611 | Pre-XDR-TB | lineage2.2.1 | vn | SRR29538999 | HR-TB | lineage4.7 | None | ERR4830605 | MDR-TB | lineage2.2.1 | tm | ERR4830839 | MDR-TB | lineage4.2.2.2 | et | ERR8665928 | MDR-TB | lineage2.2.1 | None | ERR4872045 | XDR-TB | lineage4.7 | None | SRR7645805 | MDR-TB | lineage4.2.1 | None | SRR28393605 | MDR-TB | lineage4.1.1.1 | None | SRR28339302 | MDR-TB | lineage2.2.1 | None | SRR1172095 | MDR-TB | lineage4.3.3 | None | SRR13232574 | Pre-XDR-TB | lineage2.2.1 | None | ERR551159 | MDR-TB | lineage2.2.1 | uz | ERR1465932 | MDR-TB | lineage4.7 | br | ERR2677400 | MDR-TB | lineage2.2.1 | de | ERR2677414 | MDR-TB | lineage2.2.1 | de | ERR2677416 | XDR-TB | lineage4.3.3 | de | ERR2516459 | MDR-TB | lineage2.2.1 | nl | SRR5709949 | Pre-XDR-TB | lineage2.2.1 | th | ERR552136 | MDR-TB | lineage2.2.1 | ru | ERR551212 | MDR-TB | lineage2.2.1 | ru | SRR6824680 | RR-TB | lineage2.2.1 | cn | SRR16156679 | MDR-TB | lineage2.2.1 | None | SRR16156720 | MDR-TB | lineage2.2.1 | None | SRR16149145 | MDR-TB | lineage4.2.2.1 | None | SRR1168979 | Pre-XDR-TB | lineage2.2.1 | None | SRR3082073 | MDR-TB | lineage4.2.2.2 | None | SRR7516305 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207350 | MDR-TB | lineage4.2.2 | None | ERR1034809 | Pre-XDR-TB | lineage4.8 | pt | SRR6831862 | Pre-XDR-TB | lineage2.2.1 | None | SRR13243559 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866440 | MDR-TB | lineage4.3.3 | None | SRR27069440 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02419556 | Pre-XDR-TB | lineage2.2.1 | by | SRR29096320 | MDR-TB | lineage4.2.2.2 | None | SRR25207212 | MDR-TB | lineage2.2.1 | None | SRR7517789 | MDR-TB | lineage4.1.3 | ci | SRR29093683 | MDR-TB | lineage4.3.4.2.1 | None | ERR13284423 | MDR-TB | lineage3.1.1 | None | ERR6358871 | MDR-TB | lineage4.6.1.2 | None | SRR5067348 | MDR-TB | lineage2.2.1 | vn | SAMN02403480 | MDR-TB | lineage4.3.2 | za | SAMN02403481 | MDR-TB | lineage4.3.2 | za | SRR13232646 | Pre-XDR-TB | lineage2.2.1 | None | SRR7516304 | Pre-XDR-TB | lineage2.2.1 | None | ERR1213843 | HR-TB | lineage4 | kr | SRR13120447 | MDR-TB | lineage2.2.1 | None | SRR3743489 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035290 | Pre-XDR-TB | lineage4.6.4 | br | ERR4800096 | Pre-XDR-TB | lineage3 | None | ERR8665568 | HR-TB | lineage2.2.1 | None | SRR21690975 | MDR-TB | lineage4.2.2.2 | None | SRR16156837 | MDR-TB | lineage2.2.1 | None | ERR11044024 | MDR-TB | lineage4.2.2.2 | None | ERR2307381 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162995 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163199 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166307 | MDR-TB | lineage4.3.3 | None | SRR1163414 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822395 | MDR-TB | lineage2.2.1 | kg | SRR13870419 | XDR-TB | lineage4.1.1 | None | SRR14782025 | Pre-XDR-TB | lineage4.2.1 | None | ERR4872048 | XDR-TB | lineage4.7 | None | ERR3287331 | Pre-XDR-TB | lineage4.1.1.3 | pe | SRR1163446 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR4799367 | Pre-XDR-TB | lineage3 | None | SRR6485098 | MDR-TB | lineage2.2.1 | None | ERR1034587 | Pre-XDR-TB | lineage3 | pk | SRR671722 | MDR-TB | lineage2.2.1 | cn | SRR24466782 | MDR-TB | lineage4.1.2.1 | None | ERR4827927 | MDR-TB | lineage2.2.1 | None | ERR5987278 | MDR-TB | lineage4.1.2 | None | ERR11083060 | MDR-TB | lineage4.3.2 | None | SRR25207063 | MDR-TB | lineage4.4.2 | None | ERR9119701 | MDR-TB | lineage4.1.2 | None | SRR10040214 | MDR-TB | lineage4.5 | None | SRR15014763 | HR-TB | lineage1.1.2 | None | SRR1169009 | Pre-XDR-TB | lineage2.2.1 | None | ERR3132175 | Pre-XDR-TB | lineage2.2.1 | None | SRR14807477 | Pre-XDR-TB | lineage2.2.1 | None | SRR16089691 | MDR-TB | lineage1.1.2 | None | SRR13232588 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156825 | MDR-TB | lineage2.2.1 | None | SRR16157043 | MDR-TB | lineage2.2.1 | None | ERR1035259 | Pre-XDR-TB | lineage4.6.4 | br | SRR18593222 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR22873597 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865656 | MDR-TB | lineage4.3.3 | None | SRR6256966 | MDR-TB | lineage2.2.1 | None | SRR17787489 | MDR-TB | lineage2.2.1 | None | SRR29289340 | MDR-TB | lineage2.2.1.1 | None | SRR29289352 | MDR-TB | lineage1.1.2 | None | ERR551869 | MDR-TB | lineage2.2.1 | None | ERR13284082 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710210 | MDR-TB | lineage2.2.1 | None | ERR1035325 | Pre-XDR-TB | lineage4.6.4 | br | SRR14088373 | MDR-TB | lineage3.1.1 | None | ERR1035319 | MDR-TB | lineage4.3.3;lineage4.6.4 | br | SRR29289127 | XDR-TB | lineage3 | None | SRR29097041 | MDR-TB | lineage4.3.4.2.1 | None | SRR1011518 | Pre-XDR-TB | lineage4.5 | None | SRR1166118 | MDR-TB | lineage2.2.1 | None | ERR4798142 | MDR-TB | lineage2.2.2 | in | ERR4798455 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR13259984 | XDR-TB | lineage4.4.2 | None | ERR6397199 | MDR-TB | lineage4.2.2.2 | None | SRR12142326 | MDR-TB | lineage2.2.1 | None | ERR13276239 | MDR-TB | lineage4.2.2.2 | None | ERR5866391 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267512 | RR-TB | lineage4.3.3 | None | ERR13276180 | MDR-TB | lineage4.2.2.2 | None | ERR11043317 | MDR-TB | lineage4.2.1 | None | ERR4809327 | MDR-TB | lineage4.3.3 | za | SRR14807618 | MDR-TB | lineage4.2.1 | None | ERR4799278 | MDR-TB | lineage4.3.3 | in | ERR4872039 | XDR-TB | lineage4.7 | None | ERR4796975 | MDR-TB | lineage4.4.1.1 | in | SRR1166178 | MDR-TB | lineage4.9 | ro | ERR4872042 | XDR-TB | lineage4.7 | None | ERR4830782 | MDR-TB | lineage4.2.2.2 | et | ERR552509 | MDR-TB | lineage2.2.1 | None | SAMN02403583 | MDR-TB | lineage4.3.3 | za | ERR6866995 | MDR-TB | lineage4.1.2.1 | None | SAMN02584629 | MDR-TB | lineage4.3.3 | md | ERR13195379 | MDR-TB | lineage2.2.2 | None | SRR21887763 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810473 | Pre-XDR-TB | lineage2.2.1 | cn | SAMEA5569998 | MDR-TB | lineage4.1.2.1 | None | ERR4811322 | Pre-XDR-TB | lineage2.2.1 | cn | DRR454968 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088530 | MDR-TB | lineage4.3.3 | None | ERR3287745 | MDR-TB | lineage2.2.1 | pe | SRR28394128 | MDR-TB | lineage4.1.2.1;lineage4.3.3 | None | ERR3287755 | MDR-TB | lineage2.2.1 | pe | SRR1168962 | MDR-TB | lineage4.3.3 | None | SRR28393253 | MDR-TB | lineage4.1.2.1 | None | SRR5153607 | HR-TB | lineage4.3.3 | None | ERR4810997 | Pre-XDR-TB | lineage2.2.1 | cn | SRR28706512 | MDR-TB | lineage2.2.1 | None | ERR7910884 | MDR-TB | lineage4.1.1 | pe | SRR10040231 | MDR-TB | lineage2.2.1 | None | ERR1034616 | Pre-XDR-TB | lineage3 | pk | ERR5897119 | Pre-XDR-TB | lineage3 | None | ERR6358858 | MDR-TB | lineage4.6.1.2 | None | ERR1035348 | Pre-XDR-TB | lineage4.6.4 | br | ERR4810766 | MDR-TB | lineage4.4.2 | cn | SRR2024893 | MDR-TB | lineage2.2.2 | cn | ERR4811303 | MDR-TB | lineage2.2.1 | cn | ERR2707131 | MDR-TB | lineage4.3.4.1 | cd | ERR4829116 | HR-TB | lineage4.2.1 | it | ERR4829831 | MDR-TB | lineage2.2.1;lineage4.2.1 | it | ERR4812297 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29539784 | XDR-TB | lineage2.2.1 | None | SRR25207159 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159154 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801998 | HR-TB | lineage4.2.1 | None | ERR5865952 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420742 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232612 | Pre-XDR-TB | lineage2.2.1 | None | SRR3085331 | MDR-TB | lineage4.2.2.2 | None | SRR10869218 | Pre-XDR-TB | lineage2.2.1 | None | SRR833216 | Pre-XDR-TB | lineage4.5 | None | SAMEA2534634 | MDR-TB | lineage2.2.1 | uz | SAMEA2534696 | MDR-TB | lineage2.2.1 | uz | ERR067732 | MDR-TB | lineage2.2.1;lineage4.1 | ru | SRR6280311 | MDR-TB | lineage2.2.2 | cn | SRR5817479 | MDR-TB | lineage1.2.1.2 | au | SAMEA5569978 | MDR-TB | lineage2.2.1 | None | ERR2653077 | MDR-TB | lineage4.3.4.2 | None | SRR12420387 | Pre-XDR-TB | lineage2.2.1 | None | ERR11243557 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173860 | MDR-TB | lineage4.3.2 | None | SRR1174838 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034810 | Pre-XDR-TB | lineage4.8 | pt | SRR28046135 | Pre-XDR-TB | lineage2.2.1.1 | None | SAMN02419608 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419621 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419639 | Pre-XDR-TB | lineage2.2.1 | by | ERR4872049 | Pre-XDR-TB | lineage4.7 | None | SRR29231832 | MDR-TB | lineage4.3.4.1 | None | ERR13232613 | MDR-TB | lineage2.2.1 | None | SRR5818577 | MDR-TB | lineage4.2.2.2 | dj | ERR13258489 | HR-TB | lineage2.2.1 | None | ERR5865989 | MDR-TB | lineage4.2.1 | None | SRR28351355 | MDR-TB | lineage4.8 | None | ERR4872041 | Pre-XDR-TB | lineage4.7 | None | SRR1181072 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207325 | Pre-XDR-TB | lineage2.2.1 | None | ERR552510 | MDR-TB | lineage2.2.1 | None | SRR5074185 | MDR-TB | lineage2.2.1 | vn | SRR1169109 | Pre-XDR-TB | lineage2.2.1 | None | ERR688048 | Pre-XDR-TB | lineage3 | None | ERR4872040 | Pre-XDR-TB | lineage4.7 | None | ERR5866441 | MDR-TB | lineage4.3.3 | None | SRR18715470 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287784 | MDR-TB | lineage2.2.1 | None | ERR2307378 | MDR-TB | lineage2.2.1 | None | ERR688019 | Pre-XDR-TB | lineage3 | None | SRR1162811 | MDR-TB | lineage2.2.1 | None | ERR2510696 | MDR-TB | lineage2.2.1 | it | SRR26936944 | MDR-TB | lineage2.2.1 | None | ERR3639696 | MDR-TB | lineage2.2.1 | None | ERR8665570 | MDR-TB | lineage2.2.1 | None | ERR5865463 | MDR-TB | lineage2.2.1 | None | ERR4797311 | XDR-TB | lineage2.2.1.1;lineage3 | in | SRR3105801 | MDR-TB | lineage4.6.2 | None | SRR18715408 | XDR-TB | lineage2.2.1 | None | ERR2515130 | MDR-TB | lineage4.3.2.1 | za | ERR9125330 | MDR-TB | lineage4.5 | None | ERR4810763 | MDR-TB | lineage4.4.2 | cn | SRR1169184 | MDR-TB | lineage4.3.3 | None | ERR5866460 | MDR-TB | lineage2.2.1 | None | SRR1165604 | MDR-TB | lineage2.2.1 | None | ERR9119633 | MDR-TB | lineage4.6.2.2 | None | SRR28393277 | MDR-TB | lineage4.1.2.1 | None | SRR12420824 | RR-TB | lineage2.2.1 | None | ERR13291389 | MDR-TB | lineage1.1.2 | None | SRR13232445 | MDR-TB | lineage2.2.1 | None | ERR11081287 | Pre-XDR-TB | lineage2.2.1 | None | SRR17658004 | Pre-XDR-TB | lineage2.2.1 | None | SRR18054798 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872151 | MDR-TB | lineage4.8 | None | ERR4827926 | MDR-TB | lineage2.2.1 | None | SRR7781506 | MDR-TB | lineage4.2.2.2 | None | ERR11043185 | MDR-TB | lineage2.2.1 | None | SRR11786868 | MDR-TB | lineage2.2.1 | None | ERR1035355 | Pre-XDR-TB | lineage4.6.4 | br | ERR1034615 | Pre-XDR-TB | lineage3 | pk | ERR8774581 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865832 | MDR-TB | lineage2.2.1 | None | ERR3273108 | Pre-XDR-TB | lineage2.2.2 | None | SRR29016738 | MDR-TB | lineage2.2.1 | None | SRR25206943 | MDR-TB | lineage2.2.1 | None | SRR28393590 | MDR-TB | lineage2.2.1 | None | ERR11138620 | RR-TB | lineage2.2.1 | None | ERR9029847 | MDR-TB | lineage2.2.1 | None | ERR7737644 | MDR-TB | lineage4.2.2.2 | None | SRR11662570 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119729 | Pre-XDR-TB | lineage2.2.1 | None | ERR550764 | MDR-TB | lineage3.1.1 | None | ERR11044294 | MDR-TB | lineage1.2.1.2.1 | None | ERR11081337 | MDR-TB | lineage4.2.1 | None | SRR16156843 | MDR-TB | lineage2.2.1 | None | ERR552510_ERR552509 | MDR-TB | lineage2.2.1 | None | ERR13260356 | MDR-TB | lineage2.2.1 | None | ERR4872046 | XDR-TB | lineage4.7 | None | ERR688047 | Pre-XDR-TB | lineage3 | None | SRR8335148 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723431 | Pre-XDR-TB | lineage2.2.2 | cn | SRR25206957 | MDR-TB | lineage4.4.2 | None | SRR5535708 | MDR-TB | lineage4.1.3 | None | SRR1011522 | Pre-XDR-TB | lineage4.5 | None | ERR552418 | MDR-TB | lineage2.2.1 | None | SRR7781511 | MDR-TB | lineage4.1.3 | None | ERR4872044 | XDR-TB | lineage4.7 | None | ERR7737698 | MDR-TB | lineage1.1.1.1 | None | ERR5865655 | MDR-TB | lineage4.3.3 | None | SRR1167321 | MDR-TB | lineage4.3.2 | None | SRR1172320 | Pre-XDR-TB | lineage2.2.1 | None | SRR29289310 | XDR-TB | lineage3 | None | ERR16022285 | Pre-XDR-TB | lineage2.2.1 | None | ERR16022251 | Pre-XDR-TB | lineage2.2.1 | None | ERR16022272 | MDR-TB | lineage1.1.3.3 | None | ERR11488561 | MDR-TB | lineage2.2.1 | None | ERR11082024 | MDR-TB | lineage2.2.1 | None | DRR130173 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017632 | MDR-TB | lineage1.1.2 | None | SRR29539754 | MDR-TB | lineage2.2.1 | None | ERR2510624 | MDR-TB | lineage3 | pk | ERR3335751 | MDR-TB | lineage2.2.1 | pk | ERR3335749 | MDR-TB | lineage2.2.1 | pk | ERR13267513 | XDR-TB | lineage4.3.3 | None | SRR25206997 | Pre-XDR-TB | lineage2.2.1 | None | SRR29289339 | MDR-TB | lineage2.2.1.1 | None | SRR29289226 | XDR-TB | lineage3 | None | ERR16022273 | MDR-TB | lineage2.2.1 | None | SRR29289421 | XDR-TB | lineage3 | None | ERR16022293 | MDR-TB | lineage3 | None | ERR16022326 | Pre-XDR-TB | lineage2.2.1 | None | ERR13273204 | MDR-TB | lineage2.2.1 | None | ERR4797097 | Pre-XDR-TB | lineage1.1.2;lineage2.2.1 | in | SRR26936924 | HR-TB | lineage2.2.1 | None | ERR5866461 | MDR-TB | lineage2.2.1 | None | ERR13276385 | MDR-TB | lineage2.2.1 | None | ERR9029851 | MDR-TB | lineage4.1.2.1 | None | ERR4799692 | Pre-XDR-TB | lineage2.2.1 | in | SRR29231698 | MDR-TB | lineage4.3.4.1 | None | SRR17657952 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796441 | Pre-XDR-TB | lineage2.2.1 | in | ERR552417_ERR552418 | MDR-TB | lineage2.2.1 | None | ERR4872043 | Pre-XDR-TB | lineage4.7 | None | ERR13260980 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260497 | MDR-TB | lineage4.9 | None | SRR1166189 | Pre-XDR-TB | lineage4.1.2.1 | ro | SAMN02584652 | MDR-TB | lineage2.2.1 | md | ERR11044260 | MDR-TB | lineage2.2.1 | None | ERR4813365 | MDR-TB | lineage4.3.4.2 | pe | ERR11773815 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737680 | MDR-TB | lineage4.2.2.2 | None | SRR1159053 | Pre-XDR-TB | lineage2.2.1 | None | ERR718464 | MDR-TB | lineage4.4.2 | th | SRR28339301 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706478 | MDR-TB | lineage2.2.1 | None | SRR28706440 | MDR-TB | lineage2.2.1 | None | SRR28046141 | Pre-XDR-TB | lineage4.4 | None | SRR12142350 | MDR-TB | lineage2.2.1 | None | ERR4831240 | MDR-TB | lineage4.2.2.2 | de | SRR24256041 | MDR-TB | lineage2.2.1 | None | ERR4831239 | MDR-TB | lineage4.2.2.2 | None | ERR4831648 | Pre-XDR-TB | lineage2.2.1 | vn | ERR4810724 | MDR-TB | lineage4.4.2 | cn | ERR4828599 | MDR-TB | lineage2.2.1 | vn | ERR7911295 | Pre-XDR-TB | lineage2.2.1 | vn | ERR4829030 | MDR-TB | lineage2.2.1 | None | ERR13290592 | MDR-TB | lineage2.2.1 | None | ERR2707174 | MDR-TB | lineage4.6.1.2 | cd | ERR2707191 | MDR-TB | lineage4.3.4.1 | cd | ERR4828989 | MDR-TB | lineage4.2.2.2 | it | ERR4831647 | MDR-TB | lineage1.1.1.1 | None | SRR29772468 | MDR-TB | lineage1.2.2.1 | None | ERR779896 | MDR-TB | lineage4.1.1.3 | pe | ERR4828059 | Pre-XDR-TB | lineage2.2.1 | None | SRR24709905 | MDR-TB | lineage2.2.1 | None | SRR16156826 | MDR-TB | lineage2.2.1 | None | ERR8976108 | MDR-TB | lineage4.9 | None | ERR11044007 | MDR-TB | lineage4.2.2.2 | None | ERR11082256 | MDR-TB | lineage4.7 | None | ERR2510289 | MDR-TB | lineage3 | None | SRR12420759 | RR-TB | lineage2.2.1 | None | ERR11049567 | MDR-TB | lineage4.2.2.2 | None | ERR11082240 | MDR-TB | lineage4.2.2.2 | None | ERR11082377 | Pre-XDR-TB | lineage4.7 | None | ERR2516716 | MDR-TB | lineage2.2.1 | pe | ERR2516501 | MDR-TB | lineage2.2.1 | pe | SRR6824613 | Pre-XDR-TB | lineage2.2.2 | cn | SRR1166869 | MDR-TB | lineage2.2.1 | None | SRR10306015 | RR-TB | lineage2.2.1 | None | ERR4828996 | MDR-TB | lineage4.2.2.2 | None | ERR13290917 | Pre-XDR-TB | lineage4.5 | None | SRR29126587 | MDR-TB | lineage4.2.2.2 | None | ERR5865462 | MDR-TB | lineage2.2.1 | None | SRR6807705 | Pre-XDR-TB | lineage2.2.1 | None | SRR29274760 | Pre-XDR-TB | lineage2.2.1 | None | ERR12118032 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR5865460 | MDR-TB | lineage2.2.1 | None | ERR13276320 | XDR-TB | lineage4.3.3 | None | ERR8665569 | MDR-TB | lineage2.2.1 | None | SRR11662394 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662537 | MDR-TB | lineage2.2.1 | None | ERR2984801 | MDR-TB | lineage4.1.1.3 | None | SRR16370435 | HR-TB | lineage2.2.1 | None | ERR4276903 | MDR-TB | lineage2.2.1 | None | SRR25827342 | Pre-XDR-TB | lineage4.8 | None | ERR9119438 | HR-TB | lineage2.2.1 | None | ERR2307696 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865459 | MDR-TB | lineage2.2.1 | None | ERR3794495 | MDR-TB | lineage2.2.1 | None | SRR25207086 | MDR-TB | lineage2.2.1 | None | SRR1050530 | Pre-XDR-TB | lineage2.2.2 | None | SRR7249137 | MDR-TB | lineage2.2.1 | None | SRR15316061 | Pre-XDR-TB | lineage2.2.2 | None | ERR4813219 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11081519 | MDR-TB | lineage2.2.1 | None | ERR5866392 | Pre-XDR-TB | lineage2.2.1 | None | ERR10680045 | MDR-TB | lineage4.1.2.1 | None | SRR1011521 | Pre-XDR-TB | lineage4.5 | None | SRR24827267 | MDR-TB | lineage1.1.2 | None | SRR8651659 | MDR-TB | lineage2.2.1 | cn | ERR4811312 | MDR-TB | lineage2.2.1 | cn | ERR4827525 | MDR-TB | lineage2.2.1 | None | ERR4822324 | XDR-TB | lineage4.3.3 | de | ERR4822599 | XDR-TB | lineage4.3.3 | de | ERR4822600 | XDR-TB | lineage4.3.3 | de | SRR16088410 | MDR-TB | lineage4.3.3 | None | SRR24710045 | XDR-TB | lineage2.2.1 | None | SRR25206935 | MDR-TB | lineage2.2.1 | None | ERR3287495 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR4830919 | Pre-XDR-TB | lineage2.2.1 | np | SRR23938664 | MDR-TB | lineage2.2.1 | None | SRR12420284 | MDR-TB | lineage2.2.1 | None | ERR11042995 | MDR-TB | lineage4.2.2.2 | None | SRR7652984 | Pre-XDR-TB | lineage4.8 | None | ERR10877868 | MDR-TB | lineage2.2.1 | None | ERR13285025 | MDR-TB | lineage4.2.2.2 | None | ERR9907699 | MDR-TB | lineage4.3.3 | None | SRR11662167 | MDR-TB | lineage1.1.1 | None | SRR23938668 | MDR-TB | lineage2.2.1 | None | SRR7657757 | MDR-TB | lineage2.2.1 | None | SRR11972437 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR25207221 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710211 | MDR-TB | lineage2.2.1 | None | SRR25827356 | Pre-XDR-TB | lineage2.2.1.1;lineage2.2.1.2;lineage3 | None | SRR16058058 | MDR-TB | lineage4.5 | None | SRR6855694 | MDR-TB | lineage4.3.3 | None | SRR1173155 | MDR-TB | lineage4.3.2 | None | ERR551870 | MDR-TB | lineage2.2.1 | None | SRR29093359 | MDR-TB | lineage2.2.1 | None | ERR11082116 | MDR-TB | lineage4.2.2.2 | None | ERR10877897 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232745 | MDR-TB | lineage2.2.1 | None | SRR29772668 | MDR-TB | lineage1.2.2.1 | None | ERR10868477 | MDR-TB | lineage2.2.1 | None | ERR4830809 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR1163317 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156852 | MDR-TB | lineage2.2.1 | None | ERR1200620 | MDR-TB | lineage4.2.2.2 | et | SRR10380178 | Pre-XDR-TB | lineage2.2.1 | None | ERR13262003 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13290593 | MDR-TB | lineage2.2.1 | None | SRR12142371 | MDR-TB | lineage4.5 | None | SRR1166193 | MDR-TB | lineage4.3.3 | None | ERR13285185 | MDR-TB | lineage2.2.1 | None | SRR29231735 | MDR-TB | lineage4.6.1.2 | None | ERR11081152 | XDR-TB | lineage4.3.3 | None | SRR1163036 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR13267015 | XDR-TB | lineage2.2.1 | None | SRR28119710 | MDR-TB | lineage2.2.1 | None | SRR22251727 | MDR-TB | lineage2.2.1 | None | ERR13267514 | XDR-TB | lineage4.3.3 | None | SRR24710021 | MDR-TB | lineage2.2.1 | None | SRR28351164 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR13260318 | MDR-TB | lineage2.2.1 | None | ERR4830796 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR29096482 | MDR-TB | lineage4.2.2.2 | None | ERR4011968 | MDR-TB | lineage4.2.2.2 | None | SRR1169091 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR552417 | MDR-TB | lineage2.2.1 | None | ERR11081809 | XDR-TB | lineage4.3.3 | None | SRR29539208 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267438 | MDR-TB | lineage4.1.2.1 | None | ERR13260082 | Pre-XDR-TB | lineage4.3.3 | None | ERR13290830 | Pre-XDR-TB | lineage4.5 | None | ERR13290591 | MDR-TB | lineage2.2.1 | None | SRR23311058 | MDR-TB | lineage2.2.1 | None | SRR29017017 | MDR-TB | lineage1.1.3.1 | None | ERR13290848 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR1175350 | MDR-TB | lineage4.3.2 | None | SRR24710098 | MDR-TB | lineage2.2.1 | None | SRR29681402 | MDR-TB | lineage2.2.1 | None | SRR29273817 | XDR-TB | lineage4.1.2.1 | None | ERR8665754 | Pre-XDR-TB | lineage2.2.1 | None | SRR29342496 | MDR-TB | lineage4.3.2 | None | ERR11044613 | MDR-TB | lineage4.2.2.2 | None | ERR13291058 | Pre-XDR-TB | lineage4.5 | None | SRR15316075 | MDR-TB | lineage2.2.1.2 | None | SRR7645999 | MDR-TB | lineage4.2.1 | None | ERR11464959 | MDR-TB | lineage4.3.2.1 | None | SRR10040538 | MDR-TB | lineage2.2.1 | None | ERR5866595 | MDR-TB | lineage4.3.3 | None | SRR28514696 | MDR-TB | lineage4.3.2 | None | ERR11043936 | MDR-TB | lineage4.2.2.2 | None | SRR26937089 | MDR-TB | lineage2.2.1 | None | SRR16370474 | MDR-TB | lineage4.1.1 | None | ERR13276419 | MDR-TB | lineage4.2.1 | None | SRR11972432 | MDR-TB | lineage2.2.1 | None | SRR23310981 | MDR-TB | lineage4.2.1 | None | ERR11488415 | MDR-TB | lineage4.3.2.1 | None | SRR7796665 | MDR-TB | lineage2.2.1 | None | SRR29772609 | MDR-TB | lineage3.1.2.1 | None | ERR13290861 | MDR-TB | lineage4.3.3 | None | SRR1174829 | Pre-XDR-TB | lineage2.2.1 | None | SRR16087959 | MDR-TB | lineage2.2.1 | None | ERR13266509 | XDR-TB | lineage2.2.1 | None | SRR23691423 | MDR-TB | lineage2.2.1 | None | ERR1035274 | Pre-XDR-TB | lineage4.6.4 | br | ERR3287804 | MDR-TB | lineage4.1.2.1 | None | SRR1165332 | MDR-TB | lineage4.3.2 | None | ERR8665755 | Pre-XDR-TB | lineage2.2.1 | None | SRR29385271 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260374 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4872038 | XDR-TB | lineage4.7 | None | ERR13290815 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498360 | MDR-TB | lineage4.2.1 | None | ERR13285047 | MDR-TB | lineage4.2.2.2 | None | ERR4553776 | RR-TB | lineage1.1.2 | None | SRR17787491 | MDR-TB | lineage2.2.1 | None | SRR10040234 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872037 | XDR-TB | lineage4.7 | None | ERR5866393 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811363 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420656 | HR-TB | lineage2.2.1 | None | SRR833219 | Pre-XDR-TB | lineage4.5 | None | ERR5865461 | MDR-TB | lineage2.2.1 | None | ERR11044333 | MDR-TB | lineage4.2.2.2 | None | ERR4799289 | MDR-TB | lineage2.2.1 | None | ERR6866249 | MDR-TB | lineage2.2.1 | None | SRR10040352 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276333 | MDR-TB | lineage4.2.2.2 | None | ERR5865831 | MDR-TB | lineage2.2.1 | None | ERR13261212 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR13285140 | MDR-TB | lineage2.2.1 | None | SRR6785362 | MDR-TB | lineage2.2.1 | None | SRR23862154 | Pre-XDR-TB | lineage2.2.1 | None | SRR1019192 | Pre-XDR-TB | lineage4.5 | None | SRR29052799 | HR-TB | lineage2.2.1 | None | SRR29772400 | MDR-TB | lineage1.1.2 | None | SRR21747027 | Pre-XDR-TB | lineage2.2.1 | None | ERR13243549 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267511 | RR-TB | lineage4.3.3 | None | ERR13285114 | MDR-TB | lineage4.7 | None | SRR21277848 | MDR-TB | lineage2.2.1.2 | None | SRR1169085 | MDR-TB | lineage4.3.3 | None | ERR11081695 | MDR-TB | lineage4.2.2.2 | None | SRR29096583 | MDR-TB | lineage4.3.4.2.1 | None | SRR17657932 | HR-TB | lineage4 | None | ERR3132151 | XDR-TB | lineage4.1.2.1 | None | ERR13291087 | Pre-XDR-TB | lineage4.5 | None | SRR1168997 | MDR-TB | lineage2.2.1 | None | SRR25207094 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011963 | MDR-TB | lineage4.2.2.2 | None | SRR26558638 | MDR-TB | lineage2.2.1 | None | ERR4827637 | MDR-TB | lineage2.2.1 | None | ERR13290946 | MDR-TB | lineage4.5 | None | SRR1163166 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827485 | MDR-TB | lineage2.2.1 | None | SRR25206926 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035307 | MDR-TB | lineage4.6.4 | br | ERR11043615 | XDR-TB | lineage4.3.3 | None | SRR12420596 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232647 | MDR-TB | lineage2.2.1 | None | SRR25206908 | MDR-TB | lineage4.5 | None | ERR233350 | MDR-TB | lineage4.2.2.2 | et | SRR29274278 | MDR-TB | lineage4.3.3 | None | SRR29055614 | MDR-TB | lineage2.2.1 | None | SRR26937002 | MDR-TB | lineage2.2.1 | None | SRR10305623 | Pre-XDR-TB | lineage2.2.2 | None | SRR29385436 | Pre-XDR-TB | lineage2.2.1 | None | SRR29342482 | MDR-TB | lineage4.3.2 | None | ERR13291147 | Pre-XDR-TB | lineage2.2.1 | None | ERR3275847 | MDR-TB | lineage4.2.2.2 | nl | ERR1213904 | XDR-TB | lineage4.1.2.1 | pe | ERR13284905 | Pre-XDR-TB | lineage4.7 | None | SRR29342492 | MDR-TB | lineage4.3.2 | None | SRR8651660 | Pre-XDR-TB | lineage4.4.2 | cn | SRR10040390 | MDR-TB | lineage2.2.1 | None | ERR3273198 | MDR-TB | lineage2.1 | None | ERR5866596 | MDR-TB | lineage4.3.3 | None | ERR11067190 | MDR-TB | lineage5.1.3 | None | SRR6384968 | Pre-XDR-TB | lineage2.2.1 | None | SRR7657754 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748565 | MDR-TB | lineage2.2.1.1;lineage4.1.2 | None | ERR2653078 | MDR-TB | lineage4.3.4.2 | None | SRR21277276 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119553 | MDR-TB | lineage4.8 | None | ERR13284313 | MDR-TB | lineage2.2.1 | None | ERR11798780 | MDR-TB | lineage4.2.1 | None | ERR13291074 | Pre-XDR-TB | lineage4.5 | None | ERR13284839 | MDR-TB | lineage4.3.2 | None | ERR11773825 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872047 | XDR-TB | lineage4.7 | None | ERR13290944 | MDR-TB | lineage1.2.1.2 | None | ERR4553718 | MDR-TB | lineage2.2.2 | None | ERR13276163 | MDR-TB | lineage4.2.2.2 | None | ERR4827978 | MDR-TB | lineage2.2.1 | None | ERR13290590 | MDR-TB | lineage2.2.1 | None | SRR1165502 | MDR-TB | lineage2.2.1 | None | ERR2307486 | MDR-TB | lineage2.2.1 | None | ERR7737919 | MDR-TB | lineage4.2.2.2 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR3132179 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798741 | MDR-TB | lineage4.2.1 | None | ERR4831236 | MDR-TB | lineage2.2.1 | None | SRR29538980 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142329 | MDR-TB | lineage2.2.1 | None | ERR11488783 | MDR-TB | lineage2.2.1 | None | ERR11082971 | MDR-TB | lineage2.2.1 | None | SRR1163376 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035303 | Pre-XDR-TB | lineage4.6.4 | br | SRR29096493 | MDR-TB | lineage4.2.2.2 | None | SRR30180260 | MDR-TB | lineage4.5 | None | ERR551832 | MDR-TB | lineage2.2.1 | None | SRR1013629 | Pre-XDR-TB | lineage2.2.2 | None | SRR25534517 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093272 | MDR-TB | lineage4.2.2.2 | None | ERR4872241 | MDR-TB | lineage4.6.2.2 | None | SRR21277571 | Pre-XDR-TB | lineage2.2.2 | None | SRR29096595 | MDR-TB | lineage4.3.4.2.1 | None | ERR1035364 | Pre-XDR-TB | lineage4.6.4 | br | SRR1165625 | MDR-TB | lineage4.3.3 | None | ERR4011973 | MDR-TB | lineage4.2.2.2 | None |
|---|
