lineage | Count |
---|---|
lineage2.2.1 | 53 |
lineage4.3.3 | 9 |
lineage4.6.1.2 | 3 |
lineage4.3.2 | 2 |
lineage4.3.4.1 | 2 |
lineage4.7 | 1 |
lineage3.1.2.1 | 1 |
lineage4.2.2.2 | 12 |
lineage4.6.4 | 12 |
lineage2.2 | 5 |
lineage4.2.1 | 2 |
lineage3 | 7 |
lineage2.2.1;lineage1.1.2 | 1 |
lineage3;lineage2.2.1.1 | 1 |
lineage4.1.1 | 1 |
lineage4.1.1.3 | 4 |
lineage4.1.3 | 2 |
lineage4.1.2.1 | 3 |
lineage1.2.1.2 | 1 |
lineage4.4.2 | 5 |
lineage2.2.2 | 6 |
lineage4.8 | 2 |
lineage4.3.2.1 | 1 |
lineage2.2.1.2 | 2 |
lineage4.2.2 | 1 |
lineage4.2.1;lineage2.2.1 | 1 |
lineage1.1.2 | 1 |
lineage4.6.4;lineage4.3.3 | 1 |
lineage4.4.1.1 | 1 |
lineage4.9 | 2 |
lineage3.1.1 | 1 |
lineage1.1.1.1 | 1 |
lineage4.3.4.2 | 1 |
lineage4 | 1 |
lineage4.1;lineage2.2.1 | 1 |
spoligotype | Count |
---|---|
None | 150 |
ID | Drug resistance | Lineage | Country iso2 | ERR7911295 | Pre-XDR-TB | lineage2.2.1 | vn | SRR8651659 | MDR-TB | lineage2.2.1 | cn | ERR4811057 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4822324 | XDR-TB | lineage4.3.3 | de | SAMN02419556 | Pre-XDR-TB | lineage2.2.1 | by | ERR6358871 | MDR-TB | lineage4.6.1.2 | None | SAMN02403481 | MDR-TB | lineage4.3.2 | za | ERR2707191 | MDR-TB | lineage4.3.4.1 | cd | ERR1465932 | MDR-TB | lineage4.7 | br | ERR4799017 | MDR-TB | lineage3.1.2.1 | in | ERR233350 | MDR-TB | lineage4.2.2.2 | et | ERR2677414 | MDR-TB | lineage2.2.1 | de | ERR2510696 | MDR-TB | lineage2.2.1 | it | ERR1035324 | MDR-TB | lineage4.6.4 | br | ERR8665928 | MDR-TB | lineage2.2.1 | None | ERR4822599 | XDR-TB | lineage4.3.3 | de | ERR10877868 | MDR-TB | lineage2.2 | None | ERR4828843 | MDR-TB | lineage4.2.2.2 | None | ERR10868477 | MDR-TB | lineage2.2 | None | ERR10877897 | MDR-TB | lineage2.2 | None | ERR2677416 | XDR-TB | lineage4.3.3 | de | ERR4811367 | MDR-TB | lineage2.2 | None | SRR23310981 | MDR-TB | lineage4.2.1 | None | SRR23311058 | MDR-TB | lineage2.2 | None | ERR551212 | MDR-TB | lineage2.2.1 | ru | SAMEA2534696 | MDR-TB | lineage2.2.1 | uz | ERR4809327 | MDR-TB | lineage4.3.3 | za | ERR4828989 | MDR-TB | lineage4.2.2.2 | it | ERR4831510 | Pre-XDR-TB | lineage3 | pk | ERR4829116 | HR-TB | lineage4.2.1 | it | ERR7911126 | MDR-TB | lineage2.2.1 | vn | ERR4797097 | Pre-XDR-TB | lineage2.2.1;lineage1.1.2 | in | ERR4797311 | Pre-XDR-TB | lineage3;lineage2.2.1.1 | in | ERR8665949 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516501 | MDR-TB | lineage2.2.1 | pe | ERR2516459 | MDR-TB | lineage2.2.1 | nl | ERR7910884 | MDR-TB | lineage4.1.1 | pe | ERR8665873 | MDR-TB | lineage2.2.1 | None | ERR3287331 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR1200620 | MDR-TB | lineage4.2.2.2 | et | ERR3275847 | MDR-TB | lineage4.2.2.2 | nl | ERR4810483 | MDR-TB | lineage2.2.1 | cn | ERR4810473 | Pre-XDR-TB | lineage2.2.1 | cn | ERR1035355 | Pre-XDR-TB | lineage4.6.4 | br | SAMEA2534634 | MDR-TB | lineage2.2.1 | uz | ERR4828871 | MDR-TB | lineage4.2.2.2 | None | ERR4828894 | MDR-TB | lineage4.1.3 | None | ERR3287830 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4831648 | Pre-XDR-TB | lineage2.2.1 | vn | SAMN02584629 | MDR-TB | lineage4.3.3 | md | SAMN02414967 | MDR-TB | lineage2.2.1 | se | ERR4831239 | MDR-TB | lineage4.2.2.2 | None | ERR4830403 | HR-TB | lineage2.2.1 | vn | ERR1034616 | Pre-XDR-TB | lineage3 | pk | SRR5817479 | MDR-TB | lineage1.2.1.2 | au | ERR4810766 | MDR-TB | lineage4.4.2 | cn | ERR4798142 | MDR-TB | lineage2.2.2 | in | ERR552136 | MDR-TB | lineage2.2.1 | ru | ERR1035325 | Pre-XDR-TB | lineage4.6.4 | br | ERR1034809 | Pre-XDR-TB | lineage4.8 | pt | ERR1035290 | Pre-XDR-TB | lineage4.6.4 | br | ERR2515130 | MDR-TB | lineage4.3.2.1 | za | ERR2510289 | MDR-TB | lineage3 | None | ERR1035348 | Pre-XDR-TB | lineage4.6.4 | br | ERR3287755 | MDR-TB | lineage2.2.1 | pe | SAMN02419608 | Pre-XDR-TB | lineage2.2.1 | by | ERR4798455 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4830782 | MDR-TB | lineage4.2.2.2 | et | ERR1034810 | Pre-XDR-TB | lineage4.8 | pt | SRR6280311 | MDR-TB | lineage2.2.2 | cn | ERR4811333 | MDR-TB | lineage4.2.2 | cn | ERR3335751 | MDR-TB | lineage2.2.1 | pk | ERR1035364 | Pre-XDR-TB | lineage4.6.4 | br | ERR1034587 | Pre-XDR-TB | lineage3 | pk | ERR4828599 | MDR-TB | lineage2.2.1 | vn | ERR3287745 | MDR-TB | lineage2.2.1 | pe | ERR4828868 | MDR-TB | lineage4.2.2.2 | None | ERR4829831 | MDR-TB | lineage4.2.1;lineage2.2.1 | it | ERR3287495 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR4812297 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR1213904 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4831518 | Pre-XDR-TB | lineage3 | pk | ERR4810724 | MDR-TB | lineage4.4.2 | cn | ERR4831611 | Pre-XDR-TB | lineage2.2.1 | vn | SRR2024893 | MDR-TB | lineage2.2.2 | cn | ERR4829030 | MDR-TB | lineage2.2.1 | None | ERR2510624 | MDR-TB | lineage3 | pk | ERR4810763 | MDR-TB | lineage4.4.2 | cn | ERR4822395 | MDR-TB | lineage2.2.1 | kg | ERR4811312 | MDR-TB | lineage2.2.1 | cn | ERR4799692 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797389 | MDR-TB | lineage1.1.2 | in | ERR4830605 | MDR-TB | lineage2.2.1 | tm | ERR4799278 | Pre-XDR-TB | lineage4.3.3 | in | ERR1035303 | Pre-XDR-TB | lineage4.6.4 | br | SRR6824680 | RR-TB | lineage2.2.1 | cn | ERR1034615 | Pre-XDR-TB | lineage3 | pk | SRR5709949 | Pre-XDR-TB | lineage2.2.1 | th | SRR5067348 | MDR-TB | lineage2.2.1 | vn | SRR6824613 | Pre-XDR-TB | lineage2.2.2 | cn | SAMN02419621 | Pre-XDR-TB | lineage2.2.1 | by | ERR1035363 | Pre-XDR-TB | lineage4.6.4 | br | ERR6358858 | MDR-TB | lineage4.6.1.2 | None | SRR1723431 | Pre-XDR-TB | lineage2.2.2 | cn | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR1035319 | MDR-TB | lineage4.6.4;lineage4.3.3 | br | ERR1035307 | MDR-TB | lineage4.6.4 | br | ERR4796975 | MDR-TB | lineage4.4.1.1 | in | ERR718464 | MDR-TB | lineage4.4.2 | th | SRR1166178 | MDR-TB | lineage4.9 | ro | SRR5818577 | MDR-TB | lineage4.2.2.2 | dj | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035274 | Pre-XDR-TB | lineage4.6.4 | br | SRR1166189 | Pre-XDR-TB | lineage4.1.2.1 | ro | ERR3335749 | MDR-TB | lineage2.2.1 | pk | ERR2516716 | MDR-TB | lineage2.2.1 | pe | ERR551159 | MDR-TB | lineage2.2.1 | uz | SRR1723769 | RR-TB | lineage2.2.1 | None | SAMN02403480 | MDR-TB | lineage4.3.2 | za | SAMN02584606 | MDR-TB | lineage4.3.3 | md | ERR4810997 | Pre-XDR-TB | lineage2.2.1 | cn | SRR8651660 | Pre-XDR-TB | lineage4.4.2 | cn | SRR671722 | MDR-TB | lineage2.2.1 | cn | ERR4830839 | MDR-TB | lineage4.2.2.2 | et | SAMN02419639 | Pre-XDR-TB | lineage2.2.1 | by | ERR8976108 | MDR-TB | lineage4.9 | None | ERR8665929 | MDR-TB | lineage2.2.1 | None | ERR4798063 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4831240 | MDR-TB | lineage4.2.2.2 | de | ERR4830919 | Pre-XDR-TB | lineage2.2.1 | np | ERR550764 | MDR-TB | lineage3.1.1 | None | ERR1035310 | MDR-TB | lineage4.6.4 | br | ERR1035259 | Pre-XDR-TB | lineage4.6.4 | br | ERR4831647 | MDR-TB | lineage1.1.1.1 | None | ERR4811322 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4796441 | Pre-XDR-TB | lineage2.2.1 | in | SRR5074185 | MDR-TB | lineage2.2.1 | vn | ERR4813365 | MDR-TB | lineage4.3.4.2 | pe | ERR4822600 | XDR-TB | lineage4.3.3 | de | ERR779896 | MDR-TB | lineage4.1.1.3 | pe | ERR4811303 | MDR-TB | lineage2.2.1 | cn | ERR2707131 | MDR-TB | lineage4.3.4.1 | cd | ERR2677400 | MDR-TB | lineage2.2.1 | de | ERR7911280 | MDR-TB | lineage2.2.1 | vn | ERR1213843 | HR-TB | lineage4 | kr | ERR067732 | RR-TB | lineage4.1;lineage2.2.1 | ru | ERR2707174 | MDR-TB | lineage4.6.1.2 | cd | SAMN02584652 | MDR-TB | lineage2.2.1 | md | SAMN02403583 | MDR-TB | lineage4.3.3 | za | SRR7517789 | MDR-TB | lineage4.1.3 | ci |
---|