| lineage | Count |
|---|---|
| lineage2.2.1 | 412 |
| lineage1.1.3.1 | 7 |
| lineage4.3.3 | 26 |
| lineage4.7 | 3 |
| lineage4.3.4.2 | 9 |
| lineage5.2 | 2 |
| lineage4.1.2.1 | 6 |
| lineage3 | 8 |
| lineage4.3.2.1 | 3 |
| lineage2.2.1.1 | 14 |
| lineage4.2.1.1 | 2 |
| lineage4.6.1.1 | 5 |
| lineage4.3.4.1 | 6 |
| lineage2.2.2 | 4 |
| lineage4.6.4 | 1 |
| lineage4 | 3 |
| lineage2.2.1;lineage4.1.1.3 | 1 |
| lineage4.5 | 4 |
| lineage4.2.1 | 4 |
| lineage4.4.1.1 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage2.2.1;lineage2.2.2 | 3 |
| lineage3.1.2.1 | 1 |
| lineage2.2.1;lineage4.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.3.2;lineage4.3.3 | 2 |
| spoligotype | Count |
|---|---|
| None | 534 |
| ID | Drug resistance | Lineage | Country iso2 | SRR29056075 | MDR-TB | lineage2.2.1 | None | SRR29017262 | MDR-TB | lineage1.1.3.1 | None | ERR4831576 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737684 | MDR-TB | lineage2.2.1 | None | SRR16156857 | MDR-TB | lineage2.2.1 | None | ERR8774370 | MDR-TB | lineage4.3.3 | None | SRR29051332 | MDR-TB | lineage4.7 | None | SRR29055826 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119831 | MDR-TB | lineage2.2.1 | None | ERR1035075 | Pre-XDR-TB | lineage2.2.1 | za | SRR16156787 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156854 | MDR-TB | lineage2.2.1 | None | ERR10748377 | MDR-TB | lineage2.2.1 | None | SRR25207236 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093814 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865109 | Pre-XDR-TB | lineage4.3.3 | None | ERR11044145 | MDR-TB | lineage2.2.1 | None | SRR16156271 | MDR-TB | lineage2.2.1 | None | SRR29093835 | MDR-TB | lineage2.2.1 | None | ERR10748390 | MDR-TB | lineage2.2.1 | None | SRR29093184 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093490 | MDR-TB | lineage2.2.1 | None | ERR2653241 | MDR-TB | lineage4.3.4.2 | None | SRR16156849 | MDR-TB | lineage2.2.1 | None | SRR29093497 | MDR-TB | lineage2.2.1 | None | SRR21887667 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987406 | MDR-TB | lineage2.2.1 | None | SRR16156677 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096520 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748356 | MDR-TB | lineage2.2.1 | None | SRR29055527 | MDR-TB | lineage2.2.1 | None | SRR29094016 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011078 | MDR-TB | lineage2.2.1 | None | ERR9120169 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096534 | MDR-TB | lineage2.2.1 | None | ERR5987452 | MDR-TB | lineage2.2.1 | None | SRR16156831 | Pre-XDR-TB | lineage2.2.1 | None | ERR970447 | MDR-TB | lineage2.2.1 | None | ERR10748330 | MDR-TB | lineage2.2.1 | None | SRR29093577 | MDR-TB | lineage2.2.1 | None | SRR10869275 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865111 | Pre-XDR-TB | lineage4.3.3 | None | ERR9119853 | MDR-TB | lineage2.2.1 | None | ERR5987313 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869157 | MDR-TB | lineage2.2.1 | None | ERR10112892 | MDR-TB | lineage2.2.1 | None | SRR29056090 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093610 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231730 | MDR-TB | lineage5.2 | None | ERR6362969 | MDR-TB | lineage2.2.1 | None | ERR1035015 | MDR-TB | lineage2.2.1 | za | ERR551622 | MDR-TB | lineage2.2.1 | None | ERR2517054 | MDR-TB | lineage2.2.1 | gb | ERR6879050 | MDR-TB | lineage4.1.2.1 | None | ERR9119870 | MDR-TB | lineage2.2.1 | None | SRR14088389 | MDR-TB | lineage3 | None | ERR13288802 | Pre-XDR-TB | lineage2.2.1 | None | ERR13292531 | Other | lineage4.3.2.1 | None | ERR13260505 | MDR-TB | lineage2.2.1 | None | ERR4796775 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR29017071 | MDR-TB | lineage1.1.3.1 | None | SRR29093394 | MDR-TB | lineage2.2.1 | None | ERR9806976 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806986 | MDR-TB | lineage2.2.1 | None | ERR10112851 | XDR-TB | lineage2.2.1 | None | ERR275183 | MDR-TB | lineage4.3.4.2 | pt | SRR29055870 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715041 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR10748466 | XDR-TB | lineage2.2.1 | None | SRR29050672 | MDR-TB | lineage4.3.4.2 | None | ERR13292532 | Other | lineage4.3.2.1 | None | ERR5864738 | MDR-TB | lineage2.2.1 | None | SRR29096624 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02380996 | MDR-TB | lineage4.6.1.1 | ug | SRR29017628 | MDR-TB | lineage1.1.3.1 | None | ERR8025477 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025725 | Pre-XDR-TB | lineage2.2.1 | None | ERR10610320 | MDR-TB | lineage4.3.2.1 | None | SRR10869278 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813933 | MDR-TB | lineage4.1.2.1 | br | ERR3287569 | MDR-TB | lineage4.3.3 | None | SRR28394189 | MDR-TB | lineage4.1.2.1 | None | SRR16156835 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287763 | MDR-TB | lineage4.3.3 | pe | ERR4822318 | MDR-TB | lineage2.2.1 | de | ERR4810980 | Pre-XDR-TB | lineage2.2.1 | cn | SRR28239562 | Pre-XDR-TB | lineage4.3.3 | None | ERR11773801 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393995 | Pre-XDR-TB | lineage4.3.3 | None | SRR28394209 | MDR-TB | lineage4.3.4.1 | None | ERR5987246 | MDR-TB | lineage2.2.1 | None | ERR7911527 | Pre-XDR-TB | lineage2.2.1 | za | ERR7911151 | Pre-XDR-TB | lineage2.2.2 | vn | ERR4831893 | MDR-TB | lineage2.2.1.1 | vn | ERR751591 | Pre-XDR-TB | lineage4.3.3 | pe | ERR4829978 | MDR-TB | lineage4.6.4 | None | ERR7911655 | Pre-XDR-TB | lineage2.2.1 | za | ERR5917991 | MDR-TB | lineage2.2.1 | za | ERR502923 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120146 | MDR-TB | lineage2.2.1 | None | SRR16156737 | MDR-TB | lineage2.2.1 | None | SRR7069280 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975852 | XDR-TB | lineage2.2.1 | None | ERR4553594 | MDR-TB | lineage1.1.3.1 | None | ERR5987331 | MDR-TB | lineage2.2.1 | None | ERR2510678 | Pre-XDR-TB | lineage2.2.1 | it | SRR3675285 | Pre-XDR-TB | lineage2.2.1 | gb | SRR5266538 | Pre-XDR-TB | lineage4.3.3 | ru | ERR2706978 | MDR-TB | lineage5.2 | cd | ERR2677415 | MDR-TB | lineage4 | de | ERR2516817 | MDR-TB | lineage2.2.1 | gb | ERR2517036 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2516391 | Pre-XDR-TB | lineage4.3.3 | be | ERR2509897 | MDR-TB | lineage2.2.1 | gb | ERR2516710 | MDR-TB | lineage4.3.3 | pe | ERR4815372 | Pre-XDR-TB | lineage3 | gb | ERR2512930 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2514646 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2512718 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2513850 | Pre-XDR-TB | lineage2.2.1 | gb | ERR9806994 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035059 | MDR-TB | lineage2.2.1;lineage4.1.1.3 | za | ERR1035193 | MDR-TB | lineage4.3.4.2 | pt | SRR21776300 | Pre-XDR-TB | lineage4.3.3 | None | SRR29093682 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748539 | MDR-TB | lineage2.2.1 | None | ERR10112862 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025612 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120073 | MDR-TB | lineage2.2.1 | None | ERR9120174 | MDR-TB | lineage2.2.1 | None | ERR5865110 | Pre-XDR-TB | lineage4.3.3 | None | ERR9806977 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748156 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748341 | MDR-TB | lineage2.2.1 | None | SRR6257087 | MDR-TB | lineage2.2.1 | ru | SRR29093956 | MDR-TB | lineage2.2.1 | None | SRR29093257 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096845 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093418 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096622 | MDR-TB | lineage2.2.1 | None | SRR29056040 | MDR-TB | lineage2.2.1 | None | SRR29056077 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748402 | MDR-TB | lineage2.2.1 | None | ERR9806961 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869062 | MDR-TB | lineage2.2.1 | None | SRR10869170 | MDR-TB | lineage2.2.1 | None | ERR4896324 | MDR-TB | lineage2.2.1 | None | SRR24256306 | MDR-TB | lineage2.2.1 | None | SRR10869224 | MDR-TB | lineage2.2.1 | None | ERR10748343 | MDR-TB | lineage2.2.1 | None | ERR2510660 | Pre-XDR-TB | lineage3 | it | ERR9806979 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992973 | XDR-TB | lineage2.2.1 | None | ERR13253330 | XDR-TB | lineage4.5 | None | ERR9119770 | MDR-TB | lineage2.2.1 | None | SRR1062886 | MDR-TB | lineage4.6.1.1 | None | ERR9992713 | XDR-TB | lineage2.2.1 | None | SRR29093295 | MDR-TB | lineage2.2.1 | None | SRR29055851 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276386 | MDR-TB | lineage4 | None | SRR29093646 | MDR-TB | lineage2.2.1 | None | ERR4553578 | MDR-TB | lineage2.2.2 | None | ERR6362271 | MDR-TB | lineage2.2.1 | None | SRR29055592 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011067 | MDR-TB | lineage2.2.1 | None | SRR10869130 | MDR-TB | lineage2.2.1 | None | DRR130059 | XDR-TB | lineage4.5 | None | SRR29093239 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802023 | HR-TB | lineage4.2.1 | None | ERR4831589 | MDR-TB | lineage2.2.1 | None | SRR10869274 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869251 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865743 | MDR-TB | lineage4.3.3 | None | SRR16156752 | MDR-TB | lineage2.2.1 | None | SRR29056055 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987316 | MDR-TB | lineage2.2.1 | None | ERR10748541 | Pre-XDR-TB | lineage2.2.1 | None | SRR29055549 | MDR-TB | lineage2.2.1 | None | ERR13288995 | MDR-TB | lineage4.4.1.1 | None | SRR29055808 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069397 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865744 | MDR-TB | lineage4.3.3 | None | SRR9225002 | MDR-TB | lineage4.7 | None | SRR998856 | MDR-TB | lineage2.2.1 | None | ERR5987377 | MDR-TB | lineage2.2.1 | None | ERR9119895 | MDR-TB | lineage2.2.1 | None | ERR9120072 | MDR-TB | lineage2.2.1 | None | ERR4011081 | Pre-XDR-TB | lineage2.2.1 | None | SRR29055837 | Pre-XDR-TB | lineage2.2.1 | None | ERR983236 | MDR-TB | lineage2.2.1 | None | ERR11775081 | MDR-TB | lineage2.2.1 | None | SRR24256303 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987232 | MDR-TB | lineage2.2.1 | None | ERR13284393 | MDR-TB | lineage2.2.1.1 | None | ERR1035079 | Pre-XDR-TB | lineage2.2.1 | za | ERR10748393 | MDR-TB | lineage2.2.1 | None | ERR10748348 | MDR-TB | lineage2.2.1 | None | ERR10748135 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987272 | MDR-TB | lineage2.2.1 | None | ERR5987453 | MDR-TB | lineage2.2.1 | None | SRR29093442 | MDR-TB | lineage2.2.1 | None | ERR1035074 | Pre-XDR-TB | lineage2.2.1 | za | ERR9119885 | MDR-TB | lineage2.2.1 | None | SRR21576694 | MDR-TB | lineage4.5 | None | SRR29055539 | MDR-TB | lineage2.2.1 | None | SRR29093519 | MDR-TB | lineage2.2.1 | None | ERR9119854 | MDR-TB | lineage2.2.1 | None | ERR9119835 | MDR-TB | lineage2.2.1 | None | SRR16156842 | MDR-TB | lineage2.2.1 | None | SRR29093260 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284792 | MDR-TB | lineage2.2.1 | None | ERR10112869 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049723 | MDR-TB | lineage4.6.1.1 | None | ERR11043607 | MDR-TB | lineage4 | None | SRR29093516 | MDR-TB | lineage2.2.1 | None | ERR10748521 | MDR-TB | lineage2.2.1 | None | SRR29055559 | MDR-TB | lineage2.2.1 | None | ERR1035023 | MDR-TB | lineage2.2.1 | za | ERR10748386 | MDR-TB | lineage2.2.1 | None | ERR10748430 | MDR-TB | lineage2.2.1 | None | SRR29289276 | Pre-XDR-TB | lineage3 | None | ERR9907714 | MDR-TB | lineage4.3.3 | None | SRR29017142 | MDR-TB | lineage2.2.2 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR4828971 | Pre-XDR-TB | lineage3 | None | SRR29093347 | MDR-TB | lineage2.2.1 | None | SRR29093400 | Pre-XDR-TB | lineage2.2.1 | None | SRR29094028 | MDR-TB | lineage2.2.1 | None | ERR9119977 | MDR-TB | lineage2.2.1 | None | ERR1035271 | Pre-XDR-TB | lineage4.3.4.2 | br | ERR4799177 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR10869172 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748118 | Pre-XDR-TB | lineage2.2.1 | None | ERR11775005 | MDR-TB | lineage2.2.1 | None | ERR9120127 | MDR-TB | lineage2.2.1 | None | SRR29093503 | MDR-TB | lineage4.3.4.2.1 | None | ERR9993250 | XDR-TB | lineage2.2.1 | None | ERR10748438 | MDR-TB | lineage2.2.1 | None | ERR6362476 | MDR-TB | lineage2.2.1 | None | SRR16156221 | MDR-TB | lineage2.2.1 | None | ERR10748292 | MDR-TB | lineage2.2.1 | None | ERR5864739 | MDR-TB | lineage2.2.1 | None | ERR10748092 | Pre-XDR-TB | lineage2.2.1 | None | ERR6362186 | MDR-TB | lineage2.2.1 | None | SRR16156701 | MDR-TB | lineage2.2.1 | None | ERR4809192 | Pre-XDR-TB | lineage2.2.1 | za | ERR4831831 | MDR-TB | lineage2.2.1.1 | vn | ERR4831870 | MDR-TB | lineage2.2.1.1 | vn | ERR7911534 | Pre-XDR-TB | lineage2.2.1 | za | ERR4831475 | MDR-TB | lineage3 | None | ERR7911540 | Pre-XDR-TB | lineage2.2.1 | za | ERR4831867 | MDR-TB | lineage2.2.1.1 | vn | ERR7911618 | Pre-XDR-TB | lineage2.2.1 | za | ERR1023523 | MDR-TB | lineage2.2.1 | None | ERR779909 | MDR-TB | lineage4.3.3 | pe | ERR8025645 | Pre-XDR-TB | lineage2.2.1;lineage2.2.2 | None | ERR10748126 | MDR-TB | lineage2.2.1 | None | ERR8699850 | MDR-TB | lineage2.2.1 | None | ERR5987440 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975786 | Pre-XDR-TB | lineage2.2.1 | None | ERR7362012 | MDR-TB | lineage2.2.1 | None | ERR9120015 | MDR-TB | lineage2.2.1 | None | SRR10869281 | Pre-XDR-TB | lineage2.2.1;lineage2.2.2 | None | ERR2515708 | Pre-XDR-TB | lineage2.2.1 | za | ERR2515513 | Pre-XDR-TB | lineage2.2.1 | za | ERR2515920 | Pre-XDR-TB | lineage2.2.1 | za | ERR2515835 | MDR-TB | lineage2.2.1 | za | SRR7069788 | Pre-XDR-TB | lineage2.2.1 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | SRR29096376 | MDR-TB | lineage2.2.1 | None | ERR040123 | MDR-TB | lineage3.1.2.1 | ug | ERR1034802 | MDR-TB | lineage4.1.2.1 | pe | ERR13289586 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025699 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987265 | MDR-TB | lineage2.2.1 | None | ERR10748332 | MDR-TB | lineage2.2.1 | None | ERR11775007 | MDR-TB | lineage2.2.1 | None | SRR28858755 | XDR-TB | lineage4.3.4.1 | None | SRR29056044 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864740 | MDR-TB | lineage2.2.1 | None | ERR10748410 | MDR-TB | lineage2.2.1 | None | ERR10748526 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156795 | MDR-TB | lineage2.2.1 | None | SRR16156827 | Pre-XDR-TB | lineage2.2.1 | None | SRR16157047 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813215 | Pre-XDR-TB | lineage4.3.3 | None | ERR5987286 | MDR-TB | lineage2.2.1 | None | SRR7068912 | Pre-XDR-TB | lineage2.2.1 | None | ERR972795 | MDR-TB | lineage2.2.1 | None | ERR403276 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017326 | MDR-TB | lineage4.3.3 | None | ERR5987446 | MDR-TB | lineage2.2.1 | None | ERR9120147 | MDR-TB | lineage2.2.1 | None | ERR10112906 | MDR-TB | lineage2.2.1 | None | SRR14782547 | HR-TB | lineage2.2.1 | None | SRR29056309 | MDR-TB | lineage2.2.1 | None | SRR29093228 | MDR-TB | lineage2.2.1 | None | SRR29230991 | MDR-TB | lineage4.3.4.1 | None | ERR4423575 | RR-TB | lineage2.2.1 | None | ERR13288783 | MDR-TB | lineage2.2.1 | None | ERR551548 | MDR-TB | lineage2.2.1.1 | None | ERR11044154 | MDR-TB | lineage2.2.1 | None | ERR13288782 | MDR-TB | lineage2.2.1 | None | SRR10869194 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806903 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748313 | MDR-TB | lineage2.2.1 | None | ERR13289292 | Pre-XDR-TB | lineage2.2.1 | None | ERR13286190 | MDR-TB | lineage2.2.1 | None | ERR551549 | MDR-TB | lineage2.2.1.1 | None | SRR14807534 | Pre-XDR-TB | lineage4.2.1 | None | ERR10748483 | MDR-TB | lineage2.2.1 | None | SRR7070092 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120176 | MDR-TB | lineage2.2.1 | None | ERR10748153 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR9806697 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156805 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR8025512 | Pre-XDR-TB | lineage2.2.1 | None | SRR29055587 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869117 | MDR-TB | lineage2.2.1 | None | ERR2200066 | MDR-TB | lineage2.2.1 | None | ERR6362820 | MDR-TB | lineage2.2.1 | None | ERR9993211 | XDR-TB | lineage2.2.1 | None | ERR9120170 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516396 | MDR-TB | lineage2.2.1 | be | ERR2516177 | MDR-TB | lineage2.2.1 | be | ERR9992796 | XDR-TB | lineage2.2.1 | None | ERR9120002 | MDR-TB | lineage2.2.1 | None | ERR2515112 | MDR-TB | lineage2.2.1 | za | ERR2515606 | MDR-TB | lineage2.2.1 | za | ERR8975802 | MDR-TB | lineage2.2.1 | None | ERR8975648 | XDR-TB | lineage2.2.1 | None | SRR16156801 | MDR-TB | lineage2.2.1 | None | SRR16156828 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156848 | MDR-TB | lineage2.2.1 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156222 | MDR-TB | lineage2.2.1 | None | ERR4011052 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120126 | MDR-TB | lineage2.2.1 | None | ERR9120142 | MDR-TB | lineage2.2.1 | None | ERR11068535 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1.1 | None | SRR16156797 | Pre-XDR-TB | lineage2.2.1 | None | ERR6362197 | MDR-TB | lineage2.2.1 | None | ERR6362831 | MDR-TB | lineage2.2.1 | None | ERR10748305 | MDR-TB | lineage2.2.1 | None | SRR26331591 | XDR-TB | lineage2.2.1 | None | ERR2653218 | MDR-TB | lineage4.3.4.1 | None | SRR16156803 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370391 | Pre-XDR-TB | lineage2.2.2 | None | SRR6797841 | Other | lineage1.1.3.1 | None | ERR9806992 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748115 | MDR-TB | lineage2.2.1 | None | ERR8025684 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813835 | Pre-XDR-TB | lineage4.3.2 | None | SRR10869098 | MDR-TB | lineage2.2.1 | None | SRR16156790 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748465 | MDR-TB | lineage2.2.1 | None | ERR4596920 | MDR-TB | lineage4.3.4.2.1 | None | ERR9806946 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025605 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156242 | MDR-TB | lineage2.2.1 | None | SRR29093312 | MDR-TB | lineage2.2.1 | None | SRR29093719 | MDR-TB | lineage2.2.1 | None | SRR7517727 | Other | lineage4.2.2.2 | None | ERR8025492 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539317 | MDR-TB | lineage2.2.1 | None | SRR29055517 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093526 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | ERR10748107 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553541 | HR-TB | lineage1.1.3.1 | None | ERR5987355 | MDR-TB | lineage2.2.1 | None | SRR29539428 | MDR-TB | lineage2.2.1 | None | ERR5987385 | MDR-TB | lineage2.2.1 | None | SRR16157048 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869287 | MDR-TB | lineage2.2.1 | None | SRR29096332 | MDR-TB | lineage2.2.1 | None | ERR1035007 | MDR-TB | lineage2.2.1 | za | ERR10748324 | MDR-TB | lineage2.2.1 | None | SRR10869038 | MDR-TB | lineage2.2.1 | None | SRR29055878 | Pre-XDR-TB | lineage2.2.1 | None | SRR29055835 | MDR-TB | lineage2.2.1 | None | SRR29056042 | Pre-XDR-TB | lineage2.2.1 | None | SRR29056043 | MDR-TB | lineage2.2.1 | None | ERR9907787 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR10748151 | MDR-TB | lineage2.2.1 | None | ERR10748396 | MDR-TB | lineage2.2.1 | None | ERR4831583 | MDR-TB | lineage2.2.1 | None | SRR10869119 | MDR-TB | lineage2.2.1 | None | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | SRR29056263 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093671 | MDR-TB | lineage2.2.1 | None | SRR21576543 | MDR-TB | lineage4.5 | None | ERR9120014 | MDR-TB | lineage2.2.1 | None | ERR9993007 | XDR-TB | lineage2.2.1 | None | ERR6865432 | MDR-TB | lineage4.3.2;lineage4.3.3 | None | SRR16156833 | MDR-TB | lineage2.2.1 | None | ERR10112897 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156231 | MDR-TB | lineage2.2.1 | None | SRR29096545 | MDR-TB | lineage2.2.1 | None | ERR2653162 | MDR-TB | lineage4.3.4.2 | None | SRR29055515 | MDR-TB | lineage2.2.1 | None | ERR10748411 | MDR-TB | lineage2.2.1 | None | ERR9120175 | MDR-TB | lineage2.2.1 | None | ERR5987347 | MDR-TB | lineage2.2.1 | None | SRR16156815 | MDR-TB | lineage2.2.1 | None | SRR16156694 | MDR-TB | lineage2.2.1 | None | ERR4553607 | HR-TB | lineage1.1.3.1 | None | ERR9120143 | MDR-TB | lineage2.2.1 | None | ERR6362045 | MDR-TB | lineage2.2.1 | None | ERR550721 | MDR-TB | lineage2.2.1 | None | SRR10869131 | MDR-TB | lineage2.2.1 | None | ERR5987270 | MDR-TB | lineage2.2.1 | None | ERR4423576 | RR-TB | lineage2.2.1 | None | SAMN02381037 | MDR-TB | lineage4.6.1.1 | None | SRR29093169 | Pre-XDR-TB | lineage2.2.1 | None | ERR13289516 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748439 | MDR-TB | lineage2.2.1 | None | ERR9120003 | MDR-TB | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR29093494 | MDR-TB | lineage2.2.1 | None | SRR10869174 | Pre-XDR-TB | lineage2.2.1 | None | ERR13289555 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096623 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096266 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093702 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539547 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156841 | MDR-TB | lineage2.2.1 | None | SRR6256975 | MDR-TB | lineage2.2.1 | None | SRR29093607 | MDR-TB | lineage2.2.1 | None | SRR16156847 | MDR-TB | lineage2.2.1 | None | ERR9992980 | XDR-TB | lineage2.2.1 | None | SRR29096583 | MDR-TB | lineage4.3.4.2.1 | None | SRR29093658 | MDR-TB | lineage2.2.1 | None | ERR6362185 | MDR-TB | lineage2.2.1 | None | SRR16156850 | MDR-TB | lineage2.2.1 | None | SRR7517731 | HR-TB | lineage4.2.2.2 | None | ERR13285218 | MDR-TB | lineage2.2.1 | None | ERR4178275 | MDR-TB | lineage4.3.2;lineage4.3.3 | None | SRR29093865 | MDR-TB | lineage2.2.1 | None | ERR10112877 | MDR-TB | lineage2.2.1 | None | SRR11662659 | MDR-TB | lineage2.2.1 | None | SRR11662342 | MDR-TB | lineage2.2.1 | None | SRR29093179 | MDR-TB | lineage2.2.1 | None | SRR29096599 | MDR-TB | lineage2.2.1 | None | SRR29055569 | MDR-TB | lineage2.2.1 | None | SRR26331628 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285217 | MDR-TB | lineage2.2.1 | None | SRR29093530 | MDR-TB | lineage2.2.1 | None | ERR13285194 | MDR-TB | lineage2.2.1 | None | ERR10748514 | MDR-TB | lineage2.2.1 | None | ERR8774371 | MDR-TB | lineage4.3.3 | None | ERR4797421 | MDR-TB | lineage4.3.4.2 | in | SRR29093334 | Pre-XDR-TB | lineage2.2.1 | None | SRR29094085 | MDR-TB | lineage2.2.1 | None | ERR9806951 | MDR-TB | lineage2.2.1 | None | ERR4276897 | MDR-TB | lineage2.2.1 | None | SRR29093726 | MDR-TB | lineage2.2.1 | None | SRR7829596 | Pre-XDR-TB | lineage3 | None | ERR9120173 | MDR-TB | lineage2.2.1 | None | SRR29093145 | MDR-TB | lineage2.2.1 | None | SRR29093695 | MDR-TB | lineage2.2.1 | None | SRR11972412 | MDR-TB | lineage2.2.1 | None | ERR13284008 | MDR-TB | lineage2.2.1 | None | ERR10748131 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748200 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653115 | Pre-XDR-TB | lineage4.3.3 | None | SRR13583337 | MDR-TB | lineage4.3.4.2 | None | SRR6046243 | Pre-XDR-TB | lineage2.2.1 | gb | SRR28239796 | Pre-XDR-TB | lineage4.3.3 | None | SRR28394042 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR10869041 | MDR-TB | lineage2.2.1 | None | SRR5486880 | RR-TB | lineage4.3.3 | None | SRR1140582 | MDR-TB | lineage4.6.1.1 | None | SRR28393567 | MDR-TB | lineage4.1.2.1 | None | ERR7911574 | Pre-XDR-TB | lineage2.2.1 | za | ERR2707071 | MDR-TB | lineage4.3.4.1 | cd | ERR7911072 | MDR-TB | lineage2.2.1 | za | ERR7911382 | Pre-XDR-TB | lineage4.3.3 | us | ERR7911614 | Pre-XDR-TB | lineage2.2.1 | za | ERR8975647 | MDR-TB | lineage2.2.1 | None | ERR8975697 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975804 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975521 | MDR-TB | lineage2.2.1 | None | ERR2510251 | MDR-TB | lineage4.2.1 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510628 | Pre-XDR-TB | lineage3 | None | SRR13180361 | Pre-XDR-TB | lineage4.3.3 | None | ERR1873527 | Pre-XDR-TB | lineage2.2.1 | za | ERR1873465 | Pre-XDR-TB | lineage2.2.1 | za | ERR1873487 | Pre-XDR-TB | lineage2.2.1 | za | SAMEA2534018 | MDR-TB | lineage2.2.1.1 | de | ERR551621 | MDR-TB | lineage2.2.1 | sz | SRR14802076 | MDR-TB | lineage4.2.1 | None | SRR16156829 | MDR-TB | lineage2.2.1 | None | SRR16156838 | MDR-TB | lineage2.2.1 | None | SRR16156839 | MDR-TB | lineage2.2.1 | None | SRR16156783 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798649 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR16156822 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864741 | MDR-TB | lineage2.2.1 | None | SRR26331652 | Pre-XDR-TB | lineage2.2.1 | None | ERR10680207 | MDR-TB | lineage4.1.2.1 | None | ERR10748555 | MDR-TB | lineage2.2.1 | None | SRR5067544 | MDR-TB | lineage2.2.1.1 | vn | ERR9806995 | MDR-TB | lineage2.2.1 | None | SRR19128052 | MDR-TB | lineage2.2.1.1 | None | ERR10748106 | XDR-TB | lineage2.2.1 | None | ERR10748110 | MDR-TB | lineage2.2.1 | None | SRR16156834 | MDR-TB | lineage2.2.1 | None | ERR6362478 | MDR-TB | lineage2.2.1 | None | ERR9120125 | MDR-TB | lineage2.2.1 | None | ERR9119750 | MDR-TB | lineage2.2.1 | None | ERR8025723 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869141 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653118 | MDR-TB | lineage4.3.3 | None | SRR29050895 | MDR-TB | lineage4.7 | None | ERR13288810 | MDR-TB | lineage2.2.1 | None | ERR13289318 | MDR-TB | lineage2.2.1 | None | ERR8699107 | Pre-XDR-TB | lineage2.2.1 | None | ERR9807029 | Pre-XDR-TB | lineage2.2.1 | None | SRR16157050 | MDR-TB | lineage2.2.1 | None | ERR9807001 | Pre-XDR-TB | lineage2.2.1 | None | ERR10610118 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748196 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748286 | MDR-TB | lineage2.2.1 | None | ERR10748530 | MDR-TB | lineage2.2.1 | None | ERR10748375 | MDR-TB | lineage2.2.1 | None | ERR5987327 | MDR-TB | lineage2.2.1 | None | ERR7362005 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093155 | MDR-TB | lineage2.2.1 | None | SRR29093771 | MDR-TB | lineage2.2.1 | None | ERR4831571 | MDR-TB | lineage2.2.1 | None | SRR29096367 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025680 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748322 | MDR-TB | lineage2.2.1 | None |
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