lineage | Count |
---|---|
94 | |
La2 | 1 |
lineage4.9 | 7 |
La1 | 1 |
lineage4.3.3 | 3 |
lineage4 | 5 |
lineage2.2.1 | 3 |
lineage3.1 | 2 |
lineage2 | 1 |
lineage4.5 | 1 |
lineage4.1 | 1 |
lineage4.1.1 | 1 |
lineage2.2 | 1 |
lineage4;lineage1.1 | 1 |
spoligotype | Count |
---|---|
None | 122 |
ID | Drug resistance | Lineage | Country iso2 | ERR323038 | HR-TB | None | ERR294248 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323036 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR3283036 | HR-TB | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR323041 | HR-TB | None | ERR323043 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR133986 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797017 | Other | None | ERR3797016 | HR-TB | None | ERR3439432 | Other | None | ERR3468544 | HR-TB | None | ERR3797061 | Other | None | ERR387051 | HR-TB | None | ERR3797083 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4810741 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR5336148 | Other | None | ERR4811142 | MDR-TB | None | ERR702406 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR736867 | HR-TB | None | ERR736835 | HR-TB | None | SRR1169194 | Other | None | ERR736874 | HR-TB | None | ERR8976043 | HR-TB | None | ERR9117709 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1172234 | Other | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173166 | Other | lineage4.9 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR1175049 | RR-TB | None | SRR1175074 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1173788 | Other | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196677 | HR-TB | lineage2 | None | SRR18213713 | HR-TB | lineage4.5 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR4815604 | HR-TB | None | SRR3675465 | HR-TB | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176793 | Other | lineage4.1.1 | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675221 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675236 | HR-TB | None | SRR3675234 | Other | None | SRR3675456 | HR-TB | None | SRR3675555 | HR-TB | None | ERR4816999 | Other | None | ERR4816585 | Other | lineage2.2 | None | SRR3675558 | HR-TB | None | SRR3675572 | Other | None | ERR212121 | HR-TB | None | SRR3742665 | HR-TB | None | ERR234659 | HR-TB | None | SRR5007188 | Other | lineage4 | None | ERR4818394 | Other | lineage4.9 | None | ERR4818929 | HR-TB | None | ERR4818536 | Other | lineage4.9 | None | ERR2693239 | HR-TB | None | ERR4818615 | Other | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4819462 | Other | lineage4 | None | SRR5341302 | HR-TB | None | SRR5341333 | HR-TB | None | ERR2693230 | Other | None | SRR6046460 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6046824 | HR-TB | None |
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