Rv2428 - p.Thr105Lys
Drug resistance types
1 Sensitive
1 RR-TB
10 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 3 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| 3 | |
| lineage4.9;lineage6.3 | 3 |
| lineage6.1.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.1.2.1 | 2 |
| lineage2.1;lineage4.9 | 3 |
| lineage4 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.7 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.9 | 1 |
| lineage2.1 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.6.1.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage2.1;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La3;lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 37 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR6458423 | HR-TB | lineage2.2.1 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| ERR9786604 | Other | None | |
| ERR13265528 | Other | lineage4.9;lineage6.3 | None |
| ERR9787165 | Other | lineage6.1.3 | None |
| ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR9786682 | Other | lineage4.1.2.1 | None |
| SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR3675216 | Other | lineage2.1;lineage4.9 | None |
| ERR2027263 | Other | lineage4 | None |
| SRR3675236 | Other | None | |
| SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
| SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
| SRR7496523 | Other | lineage4.7 | None |
| SRR3675465 | Other | lineage4.9;lineage6.3 | None |
| SRR18213713 | HR-TB | None | |
| ERR4817896 | HR-TB | lineage2.2.1 | None |
| ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
| ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR13265748 | Other | lineage4.9;lineage6.3 | None |
| SRR3675581 | Other | lineage2.1;lineage4.9 | None |
| SRR7496472 | Other | lineage4.9 | None |
| SRR12142341 | HR-TB | lineage2.1 | None |
| ERR9786421 | Other | lineage4.1.2.1 | None |
| ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None |
| ERR6358755 | Other | lineage4.6.1.1 | None |
| ERR4811149 | Sensitive | lineage2.2.1 | cn |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| SRR19303884 | Other | lineage2.1;lineage6.3 | None |
| ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
| ERR9117721 | HR-TB | La3;lineage1.1.2 | None |
| SRR6044790 | Other | lineage2.1;lineage4.9 | None |
| ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
