lineage | Count |
---|---|
46 | |
lineage4.3.3 | 1 |
lineage2.2.1 | 1 |
lineage4.5 | 2 |
lineage4.1.1 | 1 |
lineage4.8 | 1 |
lineage4.9 | 1 |
lineage3 | 1 |
lineage4.1.3 | 2 |
lineage4.3 | 1 |
lineage4.1.2.1 | 1 |
lineage6 | 1 |
lineage4 | 1 |
spoligotype | Count |
---|---|
None | 60 |
ID | Drug resistance | Lineage | Country iso2 | SRR1184380 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR3675311 | Other | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR25827682 | Other | None | ERR4815604 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675221 | HR-TB | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR15368973 | Other | None | SRR18213713 | HR-TB | lineage4.5 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | SRR3675574 | HR-TB | None | ERR2229542 | Other | lineage4.8 | None | SRR6046540 | HR-TB | None | SRR3742665 | HR-TB | None | SRR5341302 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | ERR234659 | HR-TB | None | SRR5341333 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6789626 | Other | None | ERR4811105 | HR-TB | None | ERR3132133 | MDR-TB | lineage4.5 | None | ERR323043 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3797058 | Other | lineage4.9 | None | ERR4407463 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR502532 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR5336148 | Other | None | ERR736874 | HR-TB | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | SRR10809104 | Sensitive | lineage4.3 | None | ERR9786604 | Other | None | ERR9786671 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9787197 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9787165 | Other | lineage6 | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1173400 | Other | None | SRR1173629 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173778 | Other | None |
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