Rv2754c - c.-9G>A
Drug resistance types
7 Sensitive
0 RR-TB
11 HR-TB
106 MDR-TB
104 Pre-XDR-TB
3 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 5 |
| lineage4.3.3 | 11 |
| lineage2.2.1 | 129 |
| lineage1.2.2.2 | 2 |
| lineage4.3.3;lineage1.2.2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.4.2 | 23 |
| lineage2.2.1.1 | 6 |
| lineage2.2.2 | 7 |
| lineage1.1.1 | 1 |
| lineage4.4.2 | 6 |
| lineage2.2 | 2 |
| lineage4.8;lineage4.3.4.2 | 1 |
| lineage2.2.1.1;lineage1.1.1.1 | 2 |
| lineage3 | 11 |
| lineage2.1 | 10 |
| lineage4.9 | 2 |
| lineage4.5 | 3 |
| lineage4.4.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.3.4.2;lineage2.2.1 | 1 |
| lineage4.3.4.2;lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 233 |
Geographic prevalence
Country level data for this variant is available for 100 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4195292 | Sensitive | lineage4.1.2.1 | None | ERR4796261 | Pre-XDR-TB | lineage4.3.3 | in | ERR4796536 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796382 | Pre-XDR-TB | lineage4.3.3 | in | ERR4796744 | MDR-TB | lineage1.2.2.2 | in | ERR4797108 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797175 | Pre-XDR-TB | lineage4.3.3 | in | ERR4797196 | MDR-TB | lineage4.3.3;lineage1.2.2.2 | in | ERR4797689 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798173 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797765 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798311 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798183 | XDR-TB | lineage2.2.1 | in | ERR4798507 | Pre-XDR-TB | lineage4.3.3 | in | ERR4798819 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798809 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799091 | Pre-XDR-TB | lineage4.3.3 | in | ERR4798934 | MDR-TB | lineage2.2.1 | in | ERR4798977 | HR-TB | lineage4.3.3 | in | ERR4799043 | MDR-TB | lineage2.2.1 | in | ERR4798939 | MDR-TB | lineage2.2.1 | in | ERR4799257 | MDR-TB | lineage2.2.1 | in | ERR4799164 | MDR-TB | lineage1.2.2.2 | in | ERR4799935 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799314 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799557 | MDR-TB | lineage4.3.3 | in | ERR4799808 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799828 | MDR-TB | lineage3.1.2 | in | ERR4810467 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4800185 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800226 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800294 | Pre-XDR-TB | lineage4.3.3 | in | ERR4800354 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800348 | Pre-XDR-TB | lineage4.3.3 | in | ERR4800480 | Pre-XDR-TB | lineage2.2.1 | in | ERR4810943 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810468 | MDR-TB | lineage2.2.1 | cn | ERR4810631 | HR-TB | lineage2.2.1 | cn | ERR4810968 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810942 | MDR-TB | lineage2.2.1 | cn | ERR4810949 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4811160 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810970 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810993 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4811326 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4811294 | XDR-TB | lineage2.2.1 | cn | ERR4811354 | MDR-TB | lineage2.2.1 | cn | ERR9121221 | Sensitive | lineage4.1.2.1 | None | ERR7910910 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR7911116 | MDR-TB | lineage2.2.1.1 | vn | ERR7911607 | Pre-XDR-TB | lineage2.2.2 | za | ERR7975672 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR8665870 | Pre-XDR-TB | lineage2.2.1 | None | ERR751803 | HR-TB | lineage1.1.1 | th | SRR1013646 | MDR-TB | lineage4.4.2 | None | SRR1013549 | Pre-XDR-TB | lineage2.2 | None | SRR1013550 | Pre-XDR-TB | lineage2.2 | None | SRR1013647 | MDR-TB | lineage4.4.2 | None | ERR9907735 | MDR-TB | lineage4.3.3 | None | ERR9907745 | Pre-XDR-TB | lineage4.3.3 | None | SRR070004 | Pre-XDR-TB | lineage2.2.1 | None | SRR070021 | Pre-XDR-TB | lineage2.2.1 | None | SRR10305973 | MDR-TB | lineage2.2.1 | None | SRR10305977 | Pre-XDR-TB | lineage2.2.1 | None | SRR10305975 | MDR-TB | lineage2.2.1 | None | SRR10380218 | MDR-TB | lineage4.3.4.2 | None | SRR10380045 | HR-TB | lineage4.8;lineage4.3.4.2 | None | SRR10380217 | MDR-TB | lineage4.3.4.2 | None | SRR1049043 | MDR-TB | lineage4.4.2 | None | SRR1049042 | MDR-TB | lineage4.4.2 | None | SRR1144725 | Pre-XDR-TB | lineage2.2.2 | None | SRR1146349 | MDR-TB | lineage2.2.1.1;lineage1.1.1.1 | None | SRR1144811 | MDR-TB | lineage2.2.1.1;lineage1.1.1.1 | None | SRR1165245 | Pre-XDR-TB | lineage2.2.2 | None | SRR1162854 | MDR-TB | lineage2.2.1.1 | None | SRR1162900 | MDR-TB | lineage3 | None | SRR1163230 | MDR-TB | lineage2.2.1.1 | None | SRR1166829 | MDR-TB | lineage3 | None | SRR1165533 | MDR-TB | lineage3 | None | SRR1165588 | MDR-TB | lineage3 | None | SRR11828979 | Pre-XDR-TB | lineage2.1 | th | SRR11828977 | Pre-XDR-TB | lineage2.1 | th | SRR11828991 | Pre-XDR-TB | lineage2.1 | None | SRR11972300 | MDR-TB | lineage2.2.1 | None | SRR11845663 | HR-TB | lineage4.9 | None | SRR14782084 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR12142342 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142414 | MDR-TB | lineage2.2.1 | None | ERR11050509 | HR-TB | lineage4.5 | None | SRR13232703 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142372 | MDR-TB | lineage2.2.1 | None | SRR13180268 | MDR-TB | lineage3 | None | SRR15368897 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316023 | MDR-TB | lineage2.2.1 | None | SRR15316292 | HR-TB | lineage2.2.1 | None | SRR14801976 | MDR-TB | lineage4.3.4.2 | None | SRR16370548 | MDR-TB | lineage2.2.1.1 | None | SRR15723064 | HR-TB | lineage2.2.1 | None | SRR15723174 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368899 | MDR-TB | lineage2.2.1 | None | SRR15723142 | HR-TB | lineage2.2.1 | None | SRR16088466 | MDR-TB | lineage4.3.4.2 | None | SRR18714945 | MDR-TB | lineage4.3.4.2 | None | SRR22175209 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714946 | MDR-TB | lineage4.3.4.2 | None | SRR18715165 | MDR-TB | lineage2.2.1 | None | SRR20969359 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969395 | MDR-TB | lineage2.2.1 | None | SRR20969846 | MDR-TB | lineage2.2.1 | None | SRR20969901 | MDR-TB | lineage2.2.1 | None | SRR21277283 | Pre-XDR-TB | lineage4.4.2 | None | SRR21277866 | MDR-TB | lineage2.2.1 | None | SRR21576724 | Pre-XDR-TB | lineage2.2.2 | None | SRR21277864 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081294 | Pre-XDR-TB | lineage2.2.1 | None | SRR22757399 | MDR-TB | lineage2.2.1 | None | ERR11068397 | MDR-TB | lineage3 | None | SRR22536490 | MDR-TB | lineage4.4.1.1 | None | ERR11080845 | MDR-TB | lineage2.2.1 | None | SRR21887742 | MDR-TB | lineage2.2.1 | None | ERR11081996 | MDR-TB | lineage4.6.2.2 | None | ERR11082341 | MDR-TB | lineage2.2.1 | None | SRR23861879 | Pre-XDR-TB | lineage2.2.1 | None | ERR11138611 | MDR-TB | lineage2.2.1 | None | ERR11081514 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082719 | MDR-TB | lineage4.3.4.2 | None | ERR5758429 | Pre-XDR-TB | lineage2.2.2 | None | ERR234229 | Other | lineage4.5 | cn | SRR23691410 | MDR-TB | lineage2.2.1 | None | SRR23691407 | MDR-TB | lineage2.2.1 | None | SRR1723739 | Pre-XDR-TB | lineage2.2.1 | cn | SRR2024947 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN02360602 | MDR-TB | lineage4.4.2 | kr | SAMN02398716 | Pre-XDR-TB | lineage2.2.2 | kr | SRR2024988 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4818891 | Sensitive | lineage3 | None | SRR2024887 | MDR-TB | lineage2.2.1 | cn | ERR2510610 | Pre-XDR-TB | lineage4.1.1.3 | pk | ERR4816972 | MDR-TB | lineage4.3.4.2 | gb | ERR2510514 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR234134 | HR-TB | lineage2.2.1 | cn | ERR234653 | Pre-XDR-TB | lineage2.2.1 | ru | SRR11828978 | Pre-XDR-TB | lineage2.1 | th | ERR2503381 | Sensitive | lineage4.1.2 | fi | ERR2513672 | HR-TB | lineage3 | gb | ERR11049274 | MDR-TB | lineage2.1 | None | ERR2510358 | MDR-TB | lineage2.2.1 | pk | ERR4818638 | Sensitive | lineage3 | None | ERR2516907 | MDR-TB | lineage4.3.4.2 | gb | ERR2516954 | MDR-TB | lineage4.3.4.2 | gb | SRR5153910 | XDR-TB | lineage4.2.1 | None | SRR5153848 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR5217439 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4819571 | Sensitive | lineage3 | None | ERR2516951 | MDR-TB | lineage4.3.4.2 | gb | SRR1723632 | MDR-TB | lineage2.2.1 | cn | ERR2516636 | MDR-TB | lineage4.3.4.1 | pe | ERR2516642 | Pre-XDR-TB | lineage2.2.1 | nl | SRR1723633 | MDR-TB | lineage2.2.1 | cn | SAMN02414973 | MDR-TB | lineage3 | se | ERR2517107 | MDR-TB | lineage4.3.4.2 | gb | ERR2516857 | MDR-TB | lineage4.3.4.2 | gb | SRR1723721 | MDR-TB | lineage2.2.1 | cn | SRR2024922 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4828013 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827914 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828017 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827956 | MDR-TB | lineage2.2.1 | None | ERR4827991 | MDR-TB | lineage2.2.1 | None | ERR4827929 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827459 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827428 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827438 | MDR-TB | lineage2.2.1 | None | ERR4827930 | MDR-TB | lineage2.2.1 | None | ERR4827483 | MDR-TB | lineage2.2.1 | None | SRR5709889 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709865 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709897 | Pre-XDR-TB | lineage2.1 | th | ERR4828058 | MDR-TB | lineage2.2.1 | None | SRR5709816 | Pre-XDR-TB | lineage2.2.1 | th | SRR5710021 | Pre-XDR-TB | lineage2.1 | th | ERR1873552 | Pre-XDR-TB | lineage2.2.2 | za | ERR4828056 | Pre-XDR-TB | lineage2.2.1 | None | SRR5709883 | Pre-XDR-TB | lineage2.1 | th | SRR5709898 | Pre-XDR-TB | lineage2.1 | th | ERR2864227 | MDR-TB | lineage4.3.2 | pt | ERR4828052 | MDR-TB | lineage2.2.1 | None | ERR4828076 | MDR-TB | lineage2.2.1 | None | ERR4828067 | MDR-TB | lineage2.2.1 | None | ERR4828129 | MDR-TB | lineage2.2.1 | None | ERR4828098 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828127 | MDR-TB | lineage2.2.1 | None | ERR4828107 | MDR-TB | lineage2.2.1 | None | ERR4830021 | MDR-TB | lineage2.2.1 | None | ERR4830037 | MDR-TB | lineage2.2.1 | tj | ERR4829373 | MDR-TB | lineage4.3.4.2 | it | ERR4830070 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828954 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4830176 | MDR-TB | lineage2.2.1 | None | SRR671839 | Pre-XDR-TB | lineage2.2.1 | cn | SRR671732 | MDR-TB | lineage2.2.1 | cn | SRR671851 | MDR-TB | lineage2.2.1 | cn | SRR671849 | MDR-TB | lineage2.2.1 | cn | SRR6832638 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832471 | MDR-TB | lineage4.3.4.2;lineage2.2.1 | None | SRR6832498 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR6824361 | MDR-TB | lineage2.2.1 | cn | SRR6832665 | MDR-TB | lineage4.3.4.2 | None | SRR6832760 | MDR-TB | lineage4.3.4.2 | None | SRR6824286 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824362 | MDR-TB | lineage2.2.1 | cn | SRR6824601 | Pre-XDR-TB | lineage2.2.1 | cn | ERR502949 | MDR-TB | lineage2.2.1 | None | SRR6824604 | MDR-TB | lineage2.2.1 | cn | ERR502944 | MDR-TB | lineage2.2.1 | None | SRR2024965 | Pre-XDR-TB | lineage2.2.1 | cn | ERR502956 | MDR-TB | lineage2.2.1 | None | SRR2024882 | MDR-TB | lineage2.2.1 | cn | ERR502947 | Pre-XDR-TB | lineage2.2.1 | None | SRR8369848 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971183 | Pre-XDR-TB | lineage4.1.2.1 | None | DRR130107 | Pre-XDR-TB | lineage2.2.1 | None | DRR130083 | Pre-XDR-TB | lineage2.2.1 | None | ERR023256 | Other | lineage4.5 | None | DRR130193 | Pre-XDR-TB | lineage4.9 | None | ERR1034911 | MDR-TB | lineage4.3.4.2;lineage4.3.3 | pt | ERR1023401 | MDR-TB | lineage2.2.1.1 | None | ERR10762327 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR11049136 | MDR-TB | lineage2.1 | None | ERR10762328 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043325 | MDR-TB | lineage4.3.4.2 | None | ERR11044931 | Sensitive | lineage4.1.2.1 | None | ERR3639776 | Pre-XDR-TB | lineage2.2.1 | None |
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