Rv2754c - c.-9G>A


Drug resistance types
8 Sensitive 0 RR-TB 27 HR-TB 148 MDR-TB 139 Pre-XDR-TB 9 XDR-TB 4 Other
lineage Counts
lineage Count
lineage4.1.1.3 1
lineage2.2.1 211
lineage2.2.1.1 8
lineage4.3.3 13
lineage1.1.1.1;lineage2.2.1.1 2
lineage4.3.4.2 32
lineage2.2.2 8
lineage3 12
lineage2.1 10
lineage4.4.2 6
lineage4.1.2.1 5
lineage4.4 3
lineage4.4.1.1 1
lineage4.5 3
lineage1.2.2.2 1
lineage4.3.3;lineage4.3.4.2 1
lineage4.2.2 1
lineage4.6.2.2 1
lineage4.1.1.1 1
lineage4.2.1.1 1
lineage3.1.2 2
lineage4.1.2 1
lineage4.2.2.2 1
lineage4.9 2
lineage4.2.1 2
lineage4.3.4.1 1
lineage2.2.1;lineage3.1.2.1 1
lineage1.2.2.2;lineage4.3.3 1
lineage1.1.1 1
lineage4.3.2 1
lineage2.2.1;lineage4.3.4.2 1
spoligotype Counts
spoligotype Count
None 335
Geographic prevalence
Country level data for this variant is available for 96 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2510610 Pre-XDR-TB lineage4.1.1.3 pk
SRR15368897 Pre-XDR-TB lineage2.2.1 None
SRR5217439 Pre-XDR-TB lineage2.2.1.1 None
SRR22175209 Pre-XDR-TB lineage2.2.1 None
SRR11662327 Pre-XDR-TB lineage2.2.1 None
ERR4798183 XDR-TB lineage2.2.1 in
SRR12420354 MDR-TB lineage2.2.1 None
SRR2024947 Pre-XDR-TB lineage2.2.1 cn
ERR2516642 Pre-XDR-TB lineage2.2.1 nl
ERR9907745 Pre-XDR-TB lineage4.3.3 None
SRR16370548 MDR-TB lineage2.2.1.1 None
SRR12420271 Other lineage2.2.1 None
SRR25207362 Pre-XDR-TB lineage2.2.1 None
SRR6824601 Pre-XDR-TB lineage2.2.1 cn
SRR22251468 HR-TB lineage2.2.1 None
SRR1144811 MDR-TB lineage1.1.1.1;lineage2.2.1.1 None
SRR14801976 HR-TB lineage4.3.4.2 None
SAMN02398716 Pre-XDR-TB lineage2.2.2 kr
ERR11043325 MDR-TB lineage4.3.4.2 None
ERR5758429 Pre-XDR-TB lineage2.2.2 None
ERR4828013 Pre-XDR-TB lineage2.2.1 None
SRR25207191 MDR-TB lineage2.2.1 None
SRR12420641 HR-TB lineage2.2.1 None
SRR1165588 MDR-TB lineage3 None
SRR25207371 Pre-XDR-TB lineage2.2.1 None
ERR4827929 XDR-TB lineage2.2.1 None
ERR234134 HR-TB lineage2.2.1 cn
ERR4800480 Pre-XDR-TB lineage2.2.1 in
SRR12142414 MDR-TB lineage2.2.1 None
SRR16088466 MDR-TB lineage4.3.4.2 None
SRR5709897 Pre-XDR-TB lineage2.1 th
SRR1162854 MDR-TB lineage2.2.1.1 None
ERR4818891 Sensitive lineage3 None
SRR1013647 MDR-TB lineage4.4.2 None
SRR23691410 MDR-TB lineage2.2.1 None
ERR4828954 Pre-XDR-TB lineage4.1.2.1 None
SRR25207194 Pre-XDR-TB lineage2.2.1 None
SRR6832498 Pre-XDR-TB lineage4.3.4.2 None
ERR4796536 Pre-XDR-TB lineage2.2.1 in
ERR9125718 HR-TB lineage4.4 None
SRR25207189 MDR-TB lineage2.2.1 None
SRR1165533 MDR-TB lineage3 None
SRR22536490 MDR-TB lineage4.4.1.1 None
SRR15316292 HR-TB lineage2.2.1 None
ERR2517107 MDR-TB lineage4.3.4.2 gb
SRR23861879 Pre-XDR-TB lineage2.2.1 None
ERR4811294 XDR-TB lineage2.2.1 cn
SRR24256030 Pre-XDR-TB lineage2.2.1 None
ERR11050509 HR-TB lineage4.5 None
SRR7070281 HR-TB lineage3 None
SRR12142342 Pre-XDR-TB lineage2.2.1 None
SRR671839 Pre-XDR-TB lineage2.2.1 cn
ERR4827483 MDR-TB lineage2.2.1 None
ERR4810970 Pre-XDR-TB lineage2.2.1 cn
ERR11138605 MDR-TB lineage2.2.2 None
ERR4799257 MDR-TB lineage2.2.1 in
ERR11081514 Pre-XDR-TB lineage2.2.1 None
ERR12544194 MDR-TB lineage4.3.3 None
SRR16058026 HR-TB lineage4.4 None
SRR25389426 MDR-TB lineage2.2.1 None
ERR2307535 MDR-TB lineage2.2.1 None
ERR4798173 Pre-XDR-TB lineage2.2.1 in
SRR12062512 Pre-XDR-TB lineage2.2.1 None
ERR4830037 MDR-TB lineage2.2.1 tj
SRR25207225 Pre-XDR-TB lineage2.2.1 None
SRR5153848 Pre-XDR-TB lineage4.3.4.2 None
ERR867565 HR-TB lineage4.3.4.2 None
SRR10380217 MDR-TB lineage4.3.4.2 None
SRR6824361 MDR-TB lineage2.2.1 cn
ERR4796744 MDR-TB lineage1.2.2.2 in
SRR25207197 MDR-TB lineage2.2.1 None
ERR4827914 Pre-XDR-TB lineage2.2.1 None
ERR1873552 Pre-XDR-TB lineage2.2.2 za
ERR4827438 MDR-TB lineage2.2.1 None
ERR1034911 MDR-TB lineage4.3.3;lineage4.3.4.2 pt
ERR4828129 MDR-TB lineage2.2.1 None
SRR22757399 MDR-TB lineage2.2.1 None
ERR4798819 Pre-XDR-TB lineage2.2.1 in
ERR3639776 Pre-XDR-TB lineage2.2.1 None
ERR11044931 Sensitive lineage4.1.2.1 None
ERR4811354 MDR-TB lineage2.2.1 cn
DRR474076 HR-TB lineage4.2.2 None
ERR11081996 MDR-TB lineage4.6.2.2 None
ERR4796261 Pre-XDR-TB lineage4.3.3 in
ERR2516951 MDR-TB lineage4.3.4.2 gb
ERR4830176 MDR-TB lineage2.2.1 None
ERR2513672 HR-TB lineage3 gb
ERR867559 HR-TB lineage4.3.4.2 None
ERR4798507 Pre-XDR-TB lineage4.3.3 in
SAMN02414973 MDR-TB lineage3 se
ERR9121221 Sensitive lineage4.1.2.1 None
SRR24710134 MDR-TB lineage2.2.1 None
SRR1723721 MDR-TB lineage2.2.1 cn
ERR502949 MDR-TB lineage2.2.1 None
ERR4827930 MDR-TB lineage2.2.1 None
ERR4798977 HR-TB lineage4.3.3 in
ERR4797108 Pre-XDR-TB lineage2.2.1 in
SRR28888062 Pre-XDR-TB lineage2.2.1 None
SRR28045552 Pre-XDR-TB lineage2.2.1 None
SRR28351269 Pre-XDR-TB lineage2.2.1 None
SRR28393346 MDR-TB lineage4.1.1.1 None
SRR28351470 Pre-XDR-TB lineage2.2.1 None
SRR28888061 XDR-TB lineage2.2.1 None
SRR28351280 Pre-XDR-TB lineage2.2.1 None
SRR27069430 Pre-XDR-TB lineage2.2.1.1 None
SRR28714180 Pre-XDR-TB lineage4.2.1.1 None
SRR27069452 Pre-XDR-TB lineage2.2.1 None
SRR28888087 Pre-XDR-TB lineage2.2.1 None
SRR28046065 HR-TB lineage3.1.2 None
ERR8665870 Pre-XDR-TB lineage2.2.1 None
ERR234229 Other lineage4.5 cn
ERR4828107 MDR-TB lineage2.2.1 None
SRR12420313 MDR-TB lineage2.2.1 None
SRR25207050 MDR-TB lineage2.2.1 None
ERR4800226 Pre-XDR-TB lineage2.2.1 in
SRR20969359 Pre-XDR-TB lineage2.2.1 None
SAMN02360602 MDR-TB lineage4.4.2 kr
SRR25207355 Pre-XDR-TB lineage2.2.1 None
SRR1013550 Pre-XDR-TB lineage2.2.2 None
ERR4798311 Pre-XDR-TB lineage2.2.1 in
SRR15316023 MDR-TB lineage2.2.1 None
DRR130083 Pre-XDR-TB lineage2.2.1 None
SRR070004 Pre-XDR-TB lineage2.2.1 None
SRR25207376 Pre-XDR-TB lineage2.2.1 None
SRR22249468 MDR-TB lineage2.2.1 None
ERR4800354 Pre-XDR-TB lineage2.2.1 in
ERR11798636 MDR-TB lineage4.3.4.2 None
SRR11828977 Pre-XDR-TB lineage2.1 th
ERR11082341 MDR-TB lineage2.2.1 None
ERR10762327 Pre-XDR-TB lineage4.3.4.2 None
SRR12420308 HR-TB lineage2.2.1 None
ERR4827991 MDR-TB lineage2.2.1 None
ERR7910910 Pre-XDR-TB lineage4.3.4.2 None
SRR10040292 MDR-TB lineage2.2.1 None
SRR12420367 MDR-TB lineage2.2.1 None
SRR2024988 Pre-XDR-TB lineage2.2.1 cn
SRR5710021 Pre-XDR-TB lineage2.1 th
SRR2024882 MDR-TB lineage2.2.1 cn
ERR4797175 Pre-XDR-TB lineage4.3.3 in
SRR1723739 Pre-XDR-TB lineage2.2.1 cn
SRR15723142 HR-TB lineage2.2.1 None
SRR12420739 MDR-TB lineage2.2.1 None
ERR550912 MDR-TB lineage2.2.1 None
ERR4818638 Sensitive lineage3 None
ERR4798934 MDR-TB lineage2.2.1 in
SRR12420730 MDR-TB lineage2.2.1 None
SRR10305975 MDR-TB lineage2.2.1 None
SRR21277283 XDR-TB lineage4.4.2 None
SRR12420714 HR-TB lineage2.2.1 None
SRR12420520 HR-TB lineage2.2.1 None
SRR11662713 Pre-XDR-TB lineage2.2.1 None
SRR1049042 MDR-TB lineage4.4.2 None
ERR4829373 MDR-TB lineage4.3.4.2 it
SRR11828979 Pre-XDR-TB lineage2.1 th
ERR4810942 MDR-TB lineage2.2.1 cn
SRR15723064 HR-TB lineage2.2.1 None
SRR25207377 MDR-TB lineage2.2.1 None
SRR2024887 MDR-TB lineage2.2.1 cn
SRR10380218 MDR-TB lineage4.3.4.2 None
ERR4800185 Pre-XDR-TB lineage2.2.1 in
SRR22424915 HR-TB lineage4.4 None
SRR12420803 MDR-TB lineage2.2.1 None
SRR13180268 MDR-TB lineage3 None
ERR2503381 Sensitive lineage4.1.2 fi
SRR5709898 Pre-XDR-TB lineage2.1 th
SRR12420662 MDR-TB lineage2.2.1 None
SRR6824286 Pre-XDR-TB lineage2.2.1 cn
ERR4798809 Pre-XDR-TB lineage2.2.1 None
SRR12420738 MDR-TB lineage2.2.1 None
ERR7975672 Pre-XDR-TB lineage4.3.4.2 None
SRR26937036 MDR-TB lineage2.2.1.1 None
SRR11972300 MDR-TB lineage2.2.1 None
SRR25206968 Pre-XDR-TB lineage2.2.1 None
ERR2600489 MDR-TB lineage4.3.4.2 None
SRR12420466 Pre-XDR-TB lineage2.2.1 None
SRR18714945 MDR-TB lineage4.3.4.2 None
SRR9971183 Pre-XDR-TB lineage4.1.2.1 None
ERR11138611 MDR-TB lineage2.2.1 None
SRR11662188 MDR-TB lineage2.2.1 None
ERR4810468 MDR-TB lineage2.2.1 cn
ERR023256 Other lineage4.5 None
SRR10828205 Pre-XDR-TB lineage2.2.1 None
SRR10305973 MDR-TB lineage2.2.1 None
ERR4797689 Pre-XDR-TB lineage2.2.1 in
SRR25207332 MDR-TB lineage2.2.1 None
SRR25207184 Pre-XDR-TB lineage2.2.1 None
SRR6832638 Pre-XDR-TB lineage2.2.1 None
SRR11828978 Pre-XDR-TB lineage2.1 th
SRR12420671 MDR-TB lineage2.2.1 None
SRR1013646 MDR-TB lineage4.4.2 None
SRR12420516 Pre-XDR-TB lineage2.2.1 None
ERR2510514 Pre-XDR-TB lineage4.2.2.2 None
ERR12311954 HR-TB lineage4.3.3 None
SRR10040464 MDR-TB lineage2.2.1 None
SRR10040252 MDR-TB lineage2.2.1 None
SRR11845663 HR-TB lineage4.9 None
ERR4799808 Pre-XDR-TB lineage2.2.1 in
SRR5709865 Pre-XDR-TB lineage2.2.1 th
SRR25515064 Sensitive lineage2.2.1 None
ERR4828052 MDR-TB lineage2.2.1 None
ERR4799828 MDR-TB lineage3.1.2 in
SRR12420713 MDR-TB lineage2.2.1 None
SRR1162900 MDR-TB lineage3 None
DRR130107 Pre-XDR-TB lineage2.2.1 None
SRR12420470 MDR-TB lineage2.2.1 None
SRR6832760 MDR-TB lineage4.3.4.2 None
ERR502947 Pre-XDR-TB lineage2.2.1 None
ERR4810943 Pre-XDR-TB lineage2.2.1 cn
SRR14782084 Pre-XDR-TB lineage4.3.4.2 None
ERR4810993 Pre-XDR-TB lineage2.2.1 cn
ERR4830021 MDR-TB lineage2.2.1 None
ERR502956 MDR-TB lineage2.2.1 None
SRR12420793 Pre-XDR-TB lineage2.2.1 None
ERR7911116 MDR-TB lineage2.2.1.1 vn
ERR11049274 MDR-TB lineage2.1 None
ERR4810968 Pre-XDR-TB lineage2.2.1 cn
SRR2024922 Pre-XDR-TB lineage2.2.1 cn
ERR4811326 Pre-XDR-TB lineage2.2.1 cn
ERR11068397 MDR-TB lineage3 None
ERR11080845 MDR-TB lineage2.2.1 None
SRR28498375 XDR-TB lineage2.2.1 None
SRR28498365 XDR-TB lineage4.2.1 None
SRR28351206 Pre-XDR-TB lineage4.3.4.2 None
SRR28351330 Pre-XDR-TB lineage4.3.3 None
ERR2510358 MDR-TB lineage2.2.1 pk
ERR2516636 MDR-TB lineage4.3.4.1 pe
SRR21887742 MDR-TB lineage2.2.1 None
SRR18715165 MDR-TB lineage2.2.1 None
ERR2516954 MDR-TB lineage4.3.4.2 gb
SRR5709883 Pre-XDR-TB lineage2.1 th
ERR2307561 MDR-TB lineage2.2.1 None
SRR24256026 Pre-XDR-TB lineage4.3.4.2 None
ERR4828127 MDR-TB lineage2.2.1 None
SRR6824604 MDR-TB lineage2.2.1 cn
SRR25827502 Pre-XDR-TB lineage2.2.1;lineage3.1.2.1 None
ERR4828058 MDR-TB lineage2.2.1 None
ERR10762328 Pre-XDR-TB lineage2.2.1 None
ERR2516857 MDR-TB lineage4.3.4.2 gb
SRR5709816 Pre-XDR-TB lineage2.2.1 th
SRR25207083 Pre-XDR-TB lineage2.2.1 None
ERR7911607 Pre-XDR-TB lineage2.2.2 za
ERR4799043 MDR-TB lineage2.2.1 in
SRR21277866 MDR-TB lineage2.2.1 None
ERR4800348 Pre-XDR-TB lineage4.3.3 in
SRR12420274 Pre-XDR-TB lineage2.2.1 None
SRR11828991 Pre-XDR-TB lineage2.1 None
SRR18714946 MDR-TB lineage4.3.4.2 None
ERR4828076 MDR-TB lineage2.2.1 None
SRR21733084 Other lineage2.2.1 None
SRR1013549 Pre-XDR-TB lineage2.2.2 None
SRR671851 MDR-TB lineage2.2.1 cn
ERR4797196 MDR-TB lineage1.2.2.2;lineage4.3.3 in
SRR15368899 MDR-TB lineage2.2.1 None
ERR4827459 Pre-XDR-TB lineage2.2.1 None
ERR9907735 MDR-TB lineage4.3.3 None
ERR4799314 Pre-XDR-TB lineage2.2.1 in
ERR4799091 Pre-XDR-TB lineage4.3.3 in
ERR4819571 Sensitive lineage3 None
SRR12420805 MDR-TB lineage2.2.1 None
SRR12420301 MDR-TB lineage2.2.1 None
SRR2024965 Pre-XDR-TB lineage2.2.1 cn
SRR1144725 Pre-XDR-TB lineage2.2.2 None
ERR4828098 Pre-XDR-TB lineage2.2.1 None
ERR4828017 Pre-XDR-TB lineage2.2.1 None
SRR070021 Pre-XDR-TB lineage2.2.1 None
SRR13232703 Pre-XDR-TB lineage2.2.1 None
SRR671732 MDR-TB lineage2.2.1 cn
SRR25206890 Pre-XDR-TB lineage2.2.1 None
SRR12420648 MDR-TB lineage2.2.1 None
ERR4810467 Pre-XDR-TB lineage2.2.1 cn
ERR2600572 MDR-TB lineage4.3.4.2 None
SRR12062513 MDR-TB lineage2.2.1 None
SRR1049043 MDR-TB lineage4.4.2 None
SRR12420427 HR-TB lineage2.2.1 None
SRR20969901 MDR-TB lineage2.2.1 None
SRR25827755 Pre-XDR-TB lineage2.2.1 None
ERR4810949 Pre-XDR-TB lineage2.2.1 cn
SRR12420390 Pre-XDR-TB lineage2.2.1 None
SRR12420653 MDR-TB lineage2.2.1 None
ERR11081294 Pre-XDR-TB lineage2.2.1 None
ERR11082719 MDR-TB lineage4.3.4.2 None
ERR4800294 Pre-XDR-TB lineage4.3.3 in
SRR21277864 Pre-XDR-TB lineage2.2.1 None
ERR234653 Pre-XDR-TB lineage2.2.1 ru
SRR1166829 MDR-TB lineage3 None
ERR751803 HR-TB lineage1.1.1 th
DRR130193 Pre-XDR-TB lineage4.9 None
ERR11049136 MDR-TB lineage2.1 None
ERR4827956 MDR-TB lineage2.2.1 None
ERR2600571 MDR-TB lineage4.3.4.2 None
SRR20969395 MDR-TB lineage2.2.1 None
SRR23691407 MDR-TB lineage2.2.1 None
SRR25206972 Pre-XDR-TB lineage2.2.1 None
ERR2864227 MDR-TB lineage4.3.2 pt
SRR25207100 MDR-TB lineage2.2.1 None
ERR4830070 Pre-XDR-TB lineage2.2.1 None
ERR4810631 HR-TB lineage2.2.1 cn
ERR4797765 Pre-XDR-TB lineage2.2.1 in
ERR1023401 MDR-TB lineage2.2.1.1 None
ERR4816972 MDR-TB lineage4.3.4.2 gb
ERR4195292 Sensitive lineage4.1.2.1 None
ERR4799935 Pre-XDR-TB lineage2.2.1 in
ERR2516907 MDR-TB lineage4.3.4.2 gb
SRR12420622 MDR-TB lineage2.2.1 None
SRR5709889 Pre-XDR-TB lineage2.2.1 th
SRR20969846 MDR-TB lineage2.2.1 None
SRR6824362 MDR-TB lineage2.2.1 cn
SRR5153910 XDR-TB lineage4.2.1 None
ERR4796382 Pre-XDR-TB lineage4.3.3 in
SRR12420413 Pre-XDR-TB lineage2.2.1 None
SRR8369848 Pre-XDR-TB lineage2.2.1 None
SRR10305977 Pre-XDR-TB lineage2.2.1 None
SRR1723632 MDR-TB lineage2.2.1 cn
SRR25206953 XDR-TB lineage2.2.1 None
SRR6832471 MDR-TB lineage2.2.1;lineage4.3.4.2 None
SRR1146349 MDR-TB lineage1.1.1.1;lineage2.2.1.1 None
ERR502944 MDR-TB lineage2.2.1 None
SRR25207186 MDR-TB lineage2.2.1 None
SRR1723633 MDR-TB lineage2.2.1 cn
SRR25389531 MDR-TB lineage2.2.1 None
SRR12420680 HR-TB lineage2.2.1 None
SRR1163230 MDR-TB lineage2.2.1.1 None
ERR4828056 Pre-XDR-TB lineage2.2.1 None
SRR25395643 Pre-XDR-TB lineage4.3.4.2 None
ERR4828067 MDR-TB lineage2.2.1 None
SRR12420432 MDR-TB lineage2.2.1 None
ERR4827428 Pre-XDR-TB lineage2.2.1 None
ERR4798939 MDR-TB lineage2.2.1 in
SRR6832665 MDR-TB lineage4.3.4.2 None
SRR12142372 MDR-TB lineage2.2.1 None
SRR28888086 Pre-XDR-TB lineage2.2.1 None
SRR28888079 Pre-XDR-TB lineage2.2.1 None
SRR28888069 Pre-XDR-TB lineage2.2.1 None
SRR28888068 Pre-XDR-TB lineage2.2.1 None
SRR27069435 MDR-TB lineage2.2.1 None