Rv2754c - c.-9G>A


Drug resistance types
8 Sensitive 0 RR-TB 14 HR-TB 123 MDR-TB 121 Pre-XDR-TB 4 XDR-TB 3 Other
lineage Counts
lineage Count
lineage2.2.1 160
lineage2.2.2 7
lineage4.4.2 6
lineage3 11
lineage4.4.1.1 1
lineage4.6.2.2 1
lineage4.3.4.2 26
lineage4.3.3 13
lineage3.1.2.1;lineage2.2.1 1
lineage2.1 11
lineage4.2.2.2 1
lineage4.3.4.2;lineage4.3.3 1
lineage2.2.1.1 7
lineage4.3.2 1
lineage1.1.1 1
lineage4.2.1 1
lineage4.5 3
lineage1.2.2.2 2
lineage4.3.4.1 1
lineage3.1.2 1
lineage4.3.3;lineage1.2.2.2 1
lineage4.3.4.2;lineage2.2.1 1
lineage4.1.2 1
lineage4.1.1.3 1
lineage4.2.2 1
lineage4.1.2.1 5
lineage4.9 2
lineage2.2 2
lineage4.8;lineage4.3.4.2 1
lineage2.2.1.1;lineage1.1.1.1 2
spoligotype Counts
spoligotype Count
None 273
Geographic prevalence
Country level data for this variant is available for 100 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR20969359 Pre-XDR-TB lineage2.2.1 None
SRR20969846 MDR-TB lineage2.2.1 None
SRR20969395 MDR-TB lineage2.2.1 None
SRR25207083 Pre-XDR-TB lineage2.2.1 None
SRR20969901 MDR-TB lineage2.2.1 None
SRR25207225 Pre-XDR-TB lineage2.2.1 None
SRR25207376 Pre-XDR-TB lineage2.2.1 None
SRR25207191 MDR-TB lineage2.2.1 None
SRR25207194 Pre-XDR-TB lineage2.2.1 None
SRR21576724 Pre-XDR-TB lineage2.2.2 None
SRR25207377 MDR-TB lineage2.2.1 None
SRR21277866 MDR-TB lineage2.2.1 None
SRR21277283 Pre-XDR-TB lineage4.4.2 None
SRR21277864 Pre-XDR-TB lineage2.2.1 None
ERR11081294 Pre-XDR-TB lineage2.2.1 None
SRR22757399 MDR-TB lineage2.2.1 None
ERR11068397 MDR-TB lineage3 None
ERR11080845 MDR-TB lineage2.2.1 None
SRR22175209 Pre-XDR-TB lineage2.2.1 None
SRR22536490 MDR-TB lineage4.4.1.1 None
ERR11082341 MDR-TB lineage2.2.1 None
ERR11081514 Pre-XDR-TB lineage2.2.1 None
ERR11081996 MDR-TB lineage4.6.2.2 None
SRR23861879 Pre-XDR-TB lineage2.2.1 None
ERR11082719 MDR-TB lineage4.3.4.2 None
SRR25206953 XDR-TB lineage2.2.1 None
SRR24256026 Pre-XDR-TB lineage4.3.4.2 None
SRR25206890 Pre-XDR-TB lineage2.2.1 None
ERR11138611 MDR-TB lineage2.2.1 None
SRR21887742 MDR-TB lineage2.2.1 None
ERR5758429 Pre-XDR-TB lineage2.2.2 None
SRR25207186 MDR-TB lineage2.2.1 None
SRR25207050 MDR-TB lineage2.2.1 None
SRR25207100 MDR-TB lineage2.2.1 None
SRR25207371 Pre-XDR-TB lineage2.2.1 None
SRR25207197 MDR-TB lineage2.2.1 None
SRR25207332 MDR-TB lineage2.2.1 None
SRR25207355 Pre-XDR-TB lineage2.2.1 None
SRR25207362 Pre-XDR-TB lineage2.2.1 None
SRR25207189 MDR-TB lineage2.2.1 None
SRR25389426 MDR-TB lineage2.2.1 None
SRR25395643 Pre-XDR-TB lineage4.3.4.2 None
ERR12544194 MDR-TB lineage4.3.3 None
SRR24710134 MDR-TB lineage2.2.1 None
SRR25206968 Pre-XDR-TB lineage2.2.1 None
SRR25389531 MDR-TB lineage2.2.1 None
SRR25206972 Pre-XDR-TB lineage2.2.1 None
SRR25207184 Pre-XDR-TB lineage2.2.1 None
SRR1723739 Pre-XDR-TB lineage2.2.1 cn
SRR25827502 Pre-XDR-TB lineage3.1.2.1;lineage2.2.1 None
SRR23691410 MDR-TB lineage2.2.1 None
SRR25515064 Sensitive lineage2.2.1 None
SRR671851 MDR-TB lineage2.2.1 cn
SRR23691407 MDR-TB lineage2.2.1 None
SRR671732 MDR-TB lineage2.2.1 cn
SRR1723633 MDR-TB lineage2.2.1 cn
SRR1723632 MDR-TB lineage2.2.1 cn
SRR1723721 MDR-TB lineage2.2.1 cn
SRR5709865 Pre-XDR-TB lineage2.2.1 th
SRR5709897 Pre-XDR-TB lineage2.1 th
SRR5709816 Pre-XDR-TB lineage2.2.1 th
SRR5710021 Pre-XDR-TB lineage2.1 th
SRR5709889 Pre-XDR-TB lineage2.2.1 th
SRR5709898 Pre-XDR-TB lineage2.1 th
SRR5709883 Pre-XDR-TB lineage2.1 th
SRR6824286 Pre-XDR-TB lineage2.2.1 cn
SRR6824604 MDR-TB lineage2.2.1 cn
SRR6824601 Pre-XDR-TB lineage2.2.1 cn
SRR6824362 MDR-TB lineage2.2.1 cn
SRR6824361 MDR-TB lineage2.2.1 cn
ERR2510514 Pre-XDR-TB lineage4.2.2.2 None
SRR671849 MDR-TB lineage2.2.1 cn
SRR671839 Pre-XDR-TB lineage2.2.1 cn
ERR234134 HR-TB lineage2.2.1 cn
ERR1034911 MDR-TB lineage4.3.4.2;lineage4.3.3 pt
ERR7911116 MDR-TB lineage2.2.1.1 vn
ERR2864227 MDR-TB lineage4.3.2 pt
ERR11049274 MDR-TB lineage2.1 None
ERR4818638 Sensitive lineage3 None
ERR502956 MDR-TB lineage2.2.1 None
ERR502944 MDR-TB lineage2.2.1 None
ERR751803 HR-TB lineage1.1.1 th
ERR4818891 Sensitive lineage3 None
ERR1023401 MDR-TB lineage2.2.1.1 None
ERR502949 MDR-TB lineage2.2.1 None
SRR5153848 Pre-XDR-TB lineage4.3.4.2 None
SRR5153910 XDR-TB lineage4.2.1 None
ERR7911607 Pre-XDR-TB lineage2.2.2 za
SAMN02360602 MDR-TB lineage4.4.2 kr
ERR4819571 Sensitive lineage3 None
SAMN02414973 MDR-TB lineage3 se
SAMN02398716 Pre-XDR-TB lineage2.2.2 kr
SRR2024887 MDR-TB lineage2.2.1 cn
SRR2024882 MDR-TB lineage2.2.1 cn
SRR2024988 Pre-XDR-TB lineage2.2.1 cn
SRR2024922 Pre-XDR-TB lineage2.2.1 cn
SRR2024947 Pre-XDR-TB lineage2.2.1 cn
SRR2024965 Pre-XDR-TB lineage2.2.1 cn
ERR502947 Pre-XDR-TB lineage2.2.1 None
ERR234229 Other lineage4.5 cn
ERR4827438 MDR-TB lineage2.2.1 None
ERR1873552 Pre-XDR-TB lineage2.2.2 za
ERR234653 Pre-XDR-TB lineage2.2.1 ru
ERR4827428 Pre-XDR-TB lineage2.2.1 None
ERR4828017 Pre-XDR-TB lineage2.2.1 None
ERR4827914 Pre-XDR-TB lineage2.2.1 None
ERR4828013 Pre-XDR-TB lineage2.2.1 None
ERR4827991 MDR-TB lineage2.2.1 None
ERR4827929 Pre-XDR-TB lineage2.2.1 None
ERR4827483 MDR-TB lineage2.2.1 None
ERR4827459 Pre-XDR-TB lineage2.2.1 None
ERR4827930 MDR-TB lineage2.2.1 None
ERR4799257 MDR-TB lineage2.2.1 in
ERR4827956 MDR-TB lineage2.2.1 None
ERR4798939 MDR-TB lineage2.2.1 in
ERR4797765 Pre-XDR-TB lineage2.2.1 in
ERR4798819 Pre-XDR-TB lineage2.2.1 in
ERR2516951 MDR-TB lineage4.3.4.2 gb
ERR2517107 MDR-TB lineage4.3.4.2 gb
ERR4798173 Pre-XDR-TB lineage2.2.1 in
ERR2516907 MDR-TB lineage4.3.4.2 gb
ERR4798977 HR-TB lineage4.3.3 in
ERR4798934 MDR-TB lineage2.2.1 in
ERR4799164 MDR-TB lineage1.2.2.2 in
ERR2516954 MDR-TB lineage4.3.4.2 gb
ERR2516857 MDR-TB lineage4.3.4.2 gb
ERR4830037 MDR-TB lineage2.2.1 tj
ERR2516642 Pre-XDR-TB lineage2.2.1 nl
ERR4830176 MDR-TB lineage2.2.1 None
ERR4830070 Pre-XDR-TB lineage2.2.1 None
ERR4796382 Pre-XDR-TB lineage4.3.3 in
ERR4796744 MDR-TB lineage1.2.2.2 in
ERR4796536 Pre-XDR-TB lineage2.2.1 in
ERR4828052 MDR-TB lineage2.2.1 None
ERR4798183 XDR-TB lineage2.2.1 in
ERR4828056 Pre-XDR-TB lineage2.2.1 None
ERR4828076 MDR-TB lineage2.2.1 None
ERR4828058 MDR-TB lineage2.2.1 None
ERR4828067 MDR-TB lineage2.2.1 None
ERR4828098 Pre-XDR-TB lineage2.2.1 None
ERR4828107 MDR-TB lineage2.2.1 None
ERR4800480 Pre-XDR-TB lineage2.2.1 in
ERR2516636 MDR-TB lineage4.3.4.1 pe
ERR4828129 MDR-TB lineage2.2.1 None
ERR4828127 MDR-TB lineage2.2.1 None
ERR4799808 Pre-XDR-TB lineage2.2.1 in
ERR4830021 MDR-TB lineage2.2.1 None
ERR4798507 Pre-XDR-TB lineage4.3.3 in
ERR4799828 MDR-TB lineage3.1.2 in
ERR4810970 Pre-XDR-TB lineage2.2.1 cn
ERR4799043 MDR-TB lineage2.2.1 in
ERR4799091 Pre-XDR-TB lineage4.3.3 in
ERR4810467 Pre-XDR-TB lineage2.2.1 cn
ERR4810943 Pre-XDR-TB lineage2.2.1 cn
ERR4810942 MDR-TB lineage2.2.1 cn
ERR4810949 Pre-XDR-TB lineage2.2.1 cn
ERR4810968 Pre-XDR-TB lineage2.2.1 cn
ERR4797196 MDR-TB lineage4.3.3;lineage1.2.2.2 in
ERR4796261 Pre-XDR-TB lineage4.3.3 in
ERR4797108 Pre-XDR-TB lineage2.2.1 in
ERR4810993 Pre-XDR-TB lineage2.2.1 cn
ERR4797175 Pre-XDR-TB lineage4.3.3 in
ERR4810631 HR-TB lineage2.2.1 cn
ERR4810468 MDR-TB lineage2.2.1 cn
ERR4811354 MDR-TB lineage2.2.1 cn
ERR4811160 Pre-XDR-TB lineage2.2.1 cn
ERR4799557 MDR-TB lineage4.3.3 in
ERR4811294 XDR-TB lineage2.2.1 cn
ERR4811326 Pre-XDR-TB lineage2.2.1 cn
ERR4799935 Pre-XDR-TB lineage2.2.1 in
ERR4799314 Pre-XDR-TB lineage2.2.1 in
ERR4798311 Pre-XDR-TB lineage2.2.1 in
ERR4797689 Pre-XDR-TB lineage2.2.1 in
ERR4800294 Pre-XDR-TB lineage4.3.3 in
ERR4800185 Pre-XDR-TB lineage2.2.1 in
ERR4800226 Pre-XDR-TB lineage2.2.1 in
ERR4800354 Pre-XDR-TB lineage2.2.1 in
ERR4800348 Pre-XDR-TB lineage4.3.3 in
SRR6832471 MDR-TB lineage4.3.4.2;lineage2.2.1 None
ERR4829373 MDR-TB lineage4.3.4.2 it
ERR2503381 Sensitive lineage4.1.2 fi
SRR6832498 Pre-XDR-TB lineage4.3.4.2 None
ERR2510610 Pre-XDR-TB lineage4.1.1.3 pk
SRR6832665 MDR-TB lineage4.3.4.2 None
SRR6832760 MDR-TB lineage4.3.4.2 None
ERR4816972 MDR-TB lineage4.3.4.2 gb
SRR6832638 Pre-XDR-TB lineage2.2.1 None
DRR474076 HR-TB lineage4.2.2 None
ERR2510358 MDR-TB lineage2.2.1 pk
SRR8369848 Pre-XDR-TB lineage2.2.1 None
ERR10762327 Pre-XDR-TB lineage4.3.4.2 None
ERR10762328 Pre-XDR-TB lineage2.2.1 None
SRR9971183 Pre-XDR-TB lineage4.1.2.1 None
DRR130083 Pre-XDR-TB lineage2.2.1 None
DRR130107 Pre-XDR-TB lineage2.2.1 None
DRR130193 Pre-XDR-TB lineage4.9 None
ERR023256 Other lineage4.5 None
ERR11798636 MDR-TB lineage4.3.4.2 None
ERR11044931 Sensitive lineage4.1.2.1 None
ERR11049136 MDR-TB lineage2.1 None
ERR11043325 MDR-TB lineage4.3.4.2 None
ERR12311954 HR-TB lineage4.3.3 None
ERR3639776 Pre-XDR-TB lineage2.2.1 None
ERR2513672 HR-TB lineage3 gb
ERR4195292 Sensitive lineage4.1.2.1 None
ERR4828954 Pre-XDR-TB lineage4.1.2.1 None
SRR11828977 Pre-XDR-TB lineage2.1 th
SRR11828978 Pre-XDR-TB lineage2.1 th
SRR11828979 Pre-XDR-TB lineage2.1 th
ERR4798809 Pre-XDR-TB lineage2.2.1 None
SRR5217439 Pre-XDR-TB lineage2.2.1.1 None
SRR26937036 MDR-TB lineage2.2.1.1 None
ERR8665870 Pre-XDR-TB lineage2.2.1 None
SRR070021 Pre-XDR-TB lineage2.2.1 None
SRR24256030 Pre-XDR-TB lineage2.2.1 None
SRR11662617 MDR-TB lineage2.1 None
SRR11662327 Pre-XDR-TB lineage2.2.1 None
ERR7975672 Pre-XDR-TB lineage4.3.4.2 None
SRR22249468 MDR-TB lineage2.2.1 None
ERR9907735 MDR-TB lineage4.3.3 None
ERR7910910 Pre-XDR-TB lineage4.3.4.2 None
SRR21733084 Other lineage2.2.1 None
SRR22251468 HR-TB lineage2.2.1 None
ERR9121221 Sensitive lineage4.1.2.1 None
ERR9907745 Pre-XDR-TB lineage4.3.3 None
SRR070004 Pre-XDR-TB lineage2.2.1 None
SRR1013646 MDR-TB lineage4.4.2 None
SRR1013549 Pre-XDR-TB lineage2.2 None
SRR1013550 Pre-XDR-TB lineage2.2 None
SRR1013647 MDR-TB lineage4.4.2 None
SRR10305975 MDR-TB lineage2.2.1 None
SRR10380045 HR-TB lineage4.8;lineage4.3.4.2 None
SRR10305977 Pre-XDR-TB lineage2.2.1 None
SRR10305973 MDR-TB lineage2.2.1 None
SRR1049042 MDR-TB lineage4.4.2 None
SRR10380217 MDR-TB lineage4.3.4.2 None
SRR1049043 MDR-TB lineage4.4.2 None
SRR10380218 MDR-TB lineage4.3.4.2 None
SRR1144725 Pre-XDR-TB lineage2.2.2 None
SRR1162854 MDR-TB lineage2.2.1.1 None
SRR1144811 MDR-TB lineage2.2.1.1;lineage1.1.1.1 None
SRR1146349 MDR-TB lineage2.2.1.1;lineage1.1.1.1 None
SRR1162900 MDR-TB lineage3 None
SRR1163230 MDR-TB lineage2.2.1.1 None
SRR11845663 HR-TB lineage4.9 None
SRR1165533 MDR-TB lineage3 None
SRR1166829 MDR-TB lineage3 None
SRR11828991 Pre-XDR-TB lineage2.1 None
SRR1165245 Pre-XDR-TB lineage2.2.2 None
SRR1165588 MDR-TB lineage3 None
SRR11662188 MDR-TB lineage2.2.1 None
SRR11972300 MDR-TB lineage2.2.1 None
SRR12142372 MDR-TB lineage2.2.1 None
SRR12142342 Pre-XDR-TB lineage2.2.1 None
SRR13232703 Pre-XDR-TB lineage2.2.1 None
ERR11050509 HR-TB lineage4.5 None
SRR12142414 MDR-TB lineage2.2.1 None
SRR13180268 MDR-TB lineage3 None
SRR15368899 MDR-TB lineage2.2.1 None
SRR14801976 MDR-TB lineage4.3.4.2 None
SRR15316292 HR-TB lineage2.2.1 None
SRR15368897 Pre-XDR-TB lineage2.2.1 None
SRR14782084 Pre-XDR-TB lineage4.3.4.2 None
SRR15316023 MDR-TB lineage2.2.1 None
SRR16370548 MDR-TB lineage2.2.1.1 None
SRR15723064 HR-TB lineage2.2.1 None
SRR15723142 HR-TB lineage2.2.1 None
SRR15723174 Pre-XDR-TB lineage2.2.1 None
SRR16088466 MDR-TB lineage4.3.4.2 None
SRR18715165 MDR-TB lineage2.2.1 None
SRR11662713 Pre-XDR-TB lineage2.2.1 None
SRR18714946 MDR-TB lineage4.3.4.2 None
SRR18714945 MDR-TB lineage4.3.4.2 None