Rv3423c - c.-158G>T
Drug resistance types
106 Sensitive
4 RR-TB
14 HR-TB
13 MDR-TB
6 Pre-XDR-TB
2 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.2 | 83 |
| lineage4.2.2.1 | 1 |
| lineage2.2.2 | 1 |
| lineage2.2.1 | 35 |
| lineage4.5 | 6 |
| lineage4.1.2.1 | 19 |
| lineage4.2.2.2 | 3 |
| lineage1.1.3.2 | 1 |
| lineage4.3.2 | 7 |
| lineage4.4.1.1.1 | 2 |
| 1 | |
| lineage6.1.3 | 4 |
| lineage4.7 | 1 |
| lineage4.8 | 3 |
| lineage4.6.2.2 | 3 |
| lineage1.1.1.1 | 2 |
| M.canetti | 1 |
| lineage4.4.1.1 | 4 |
| lineage4.6 | 1 |
| lineage5.1.1 | 1 |
| lineage1.2.2.2;lineage4 | 1 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 181 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR26112817 | Sensitive | lineage1.2.2.2 | None | ERR11050519 | Sensitive | lineage4.2.2.1 | None | SRR12142389 | Sensitive | lineage2.2.2 | None | SRR28045447 | Other | lineage1.2.2.2 | None | SRR21675642 | Other | lineage2.2.1 | None | SRR21887675 | Pre-XDR-TB | lineage2.2.1 | None | SRR21722236 | Other | lineage2.2.1 | None | SRR22249980 | Other | lineage1.2.2.2 | None | SRR21733321 | Sensitive | lineage4.5 | None | SRR2101814 | Sensitive | lineage2.2.1 | None | SRR7069172 | Sensitive | lineage4.1.2.1 | None | ERR9121175 | Sensitive | lineage4.2.2.2 | None | SRR29440909 | Sensitive | lineage1.2.2.2 | None | SRR6807743 | Sensitive | lineage2.2.1 | None | ERR4797900 | Sensitive | lineage1.2.2.2 | None | ERR13267616 | Sensitive | lineage1.2.2.2 | None | ERR11043920 | MDR-TB | lineage1.1.3.2 | None | SRR21732748 | HR-TB | lineage1.2.2.2 | None | ERR13260430 | Sensitive | lineage2.2.1 | None | ERR4797247 | Other | lineage1.2.2.2 | in | ERR4811611 | Other | lineage2.2.1 | cn | SRR28858603 | Sensitive | lineage1.2.2.2 | None | SRR21678366 | Other | lineage1.2.2.2 | None | ERR6866342 | Sensitive | lineage4.3.2 | None | ERR2514139 | Sensitive | lineage4.1.2.1 | gb | ERR2515292 | HR-TB | lineage4.4.1.1.1 | za | SRR29017140 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR8380882 | Sensitive | lineage1.2.2.2 | in | ERR13261521 | Sensitive | lineage1.2.2.2 | None | ERR4553425 | HR-TB | None | SRR26112268 | Sensitive | lineage1.2.2.2 | None | SRR25207291 | MDR-TB | lineage2.2.1 | None | SRR28045981 | Sensitive | lineage1.2.2.2 | None | ERR2512598 | Sensitive | lineage1.2.2.2 | gb | SRR29124256 | HR-TB | lineage1.2.2.2 | None | ERR4815134 | Sensitive | lineage1.2.2.2 | gb | SRR25515531 | Sensitive | lineage2.2.1 | None | SRR29056227 | Other | lineage2.2.1 | None | SRR21675858 | Other | lineage1.2.2.2 | None | SRR24827292 | Sensitive | lineage1.2.2.2 | None | ERR4811102 | Sensitive | lineage4.5 | cn | ERR9787133 | Other | lineage6.1.3 | None | SRR15316128 | Sensitive | lineage2.2.1 | None | SRR29016870 | MDR-TB | lineage1.2.2.2 | None | ERR2513536 | Sensitive | lineage4.1.2.1 | gb | SRR29017253 | MDR-TB | lineage1.2.2.2 | None | SRR29056001 | HR-TB | lineage1.2.2.2 | None | ERR2513078 | Sensitive | lineage4.1.2.1 | gb | ERR7902704 | Sensitive | lineage1.2.2.2 | None | ERR9787292 | Other | lineage6.1.3 | None | ERR11043324 | Sensitive | lineage4.7 | None | ERR4813488 | Other | lineage4.3.2 | None | ERR4811377 | HR-TB | lineage2.2.1 | None | ERR4800060 | XDR-TB | lineage4.1.2.1 | in | SRR7069515 | Sensitive | lineage4.1.2.1 | None | SRR7131228 | Sensitive | lineage4.8 | None | ERR2513093 | Sensitive | lineage1.2.2.2 | gb | ERR4819737 | Sensitive | lineage4.1.2.1 | None | ERR4195679 | Sensitive | lineage4.2.2.2 | None | SRR19303885 | Sensitive | lineage1.2.2.2 | None | SRR28859849 | Other | lineage2.2.1 | None | ERR4821560 | Sensitive | lineage4.1.2.1 | gb | ERR4799673 | Sensitive | lineage1.2.2.2 | in | SRR26111952 | Sensitive | lineage4.6.2.2 | None | ERR11082987 | Sensitive | lineage4.8 | None | SRR28409488 | Sensitive | lineage4.3.2 | None | ERR13265177 | Other | lineage1.2.2.2 | None | ERR4797122 | Sensitive | lineage1.2.2.2 | None | ERR4811244 | HR-TB | lineage2.2.1 | None | ERR2514864 | Sensitive | lineage1.2.2.2 | gb | ERR2503450 | HR-TB | lineage4.5 | None | SRR28170827 | Other | lineage2.2.1 | None | ERR4811487 | MDR-TB | lineage2.2.1 | cn | ERR4814688 | Sensitive | lineage4.1.2.1 | gb | SRR22250170 | Sensitive | lineage1.2.2.2 | None | SRR26112535 | Other | lineage2.2.1 | None | SRR18511631 | Sensitive | lineage2.2.1 | None | SRR16099301 | Sensitive | lineage1.2.2.2 | None | SRR25515421 | Sensitive | lineage2.2.1 | None | ERR4796932 | Other | lineage1.2.2.2 | in | SRR17787598 | Sensitive | lineage4.5 | None | SRR26112631 | Other | lineage2.2.1 | None | ERR13265896 | Other | lineage1.2.2.2 | None | SRR7070158 | Sensitive | lineage4.1.2.1 | None | SRR18914227 | Other | lineage2.2.1 | None | ERR2514650 | Sensitive | lineage4.1.2.1 | gb | ERR13259782 | Sensitive | lineage2.2.1 | None | SRR12142392 | Other | lineage2.2.1 | None | SRR28706459 | Sensitive | lineage2.2.1 | None | SRR28045450 | Other | lineage1.2.2.2 | None | ERR4818589 | Sensitive | lineage1.2.2.2 | gb | SRR19276602 | Sensitive | lineage4.3.2 | None | SRR5074129 | Sensitive | lineage1.1.1.1 | vn | SRR6367396 | Other | lineage1.2.2.2 | au | ERR9657205 | Sensitive | lineage1.2.2.2 | None | SRR28045183 | Sensitive | lineage1.2.2.2 | None | SRR16099306 | Sensitive | lineage1.2.2.2 | None | SRR28044817 | Sensitive | lineage1.2.2.2 | None | SRR26112529 | Sensitive | lineage4.3.2 | None | SRR26112809 | Sensitive | lineage1.2.2.2 | None | SRR28045891 | Sensitive | lineage1.2.2.2 | None | ERR13292456 | Sensitive | lineage1.2.2.2 | None | ERR11068056 | Sensitive | lineage1.2.2.2 | None | SRR29052944 | Other | lineage1.2.2.2 | None | SRR7069963 | Sensitive | lineage4.1.2.1 | None | SRR15014789 | MDR-TB | lineage1.2.2.2 | None | ERR266123 | Sensitive | M.canetti | None | SRR7070443 | Sensitive | lineage4.1.2.1 | None | SRR25340748 | MDR-TB | lineage1.2.2.2 | None | SRR6896450 | Sensitive | lineage4.4.1.1 | None | ERR2514018 | Sensitive | lineage4.1.2.1 | gb | SRR6855950 | Sensitive | lineage4.4.1.1.1 | None | SRR17787492 | Sensitive | lineage4.5 | None | ERR11081342 | Sensitive | lineage4.6 | None | SRR22424888 | HR-TB | lineage1.2.2.2 | None | ERR1035118 | Sensitive | lineage1.1.1.1 | vn | ERR3170440 | RR-TB | lineage5.1.1 | gh | ERR4817766 | Sensitive | lineage4.1.2.1 | gb | ERR2513808 | Sensitive | lineage4.1.2.1 | gb | SRR17658567 | Other | lineage1.2.2.2 | None | ERR8699822 | HR-TB | lineage2.2.1 | None | ERR13292493 | Other | lineage2.2.1 | None | ERR13291816 | Other | lineage2.2.1 | None | ERR4800717 | HR-TB | lineage1.2.2.2 | None | ERR11050199 | Sensitive | lineage1.2.2.2 | None | SRR21685362 | Other | lineage2.2.1 | None | SRR4423177 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR22251818 | Sensitive | lineage1.2.2.2 | None | SRR21726731 | Other | lineage1.2.2.2 | None | ERR4829007 | Pre-XDR-TB | lineage2.2.1 | it | SRR29440882 | HR-TB | lineage1.2.2.2 | None | ERR4797129 | Sensitive | lineage1.2.2.2 | in | SRR21733101 | Sensitive | lineage1.2.2.2 | None | SRR18913760 | Sensitive | lineage1.2.2.2 | None | SRR29055833 | Other | lineage2.2.1 | None | ERR9806823 | RR-TB | lineage4.4.1.1 | None | SRR21277521 | Sensitive | lineage2.2.1 | None | ERR9119606 | MDR-TB | lineage4.6.2.2 | None | SRR7585395 | MDR-TB | lineage1.2.2.2 | in | ERR1023251 | Other | lineage6.1.3 | None | ERR3801495 | Other | lineage6.1.3 | None | SRR21737221 | Sensitive | lineage2.2.1 | None | ERR4797869 | Pre-XDR-TB | lineage1.2.2.2 | in | SRR16058537 | Sensitive | lineage1.2.2.2 | None | SRR22424871 | Sensitive | lineage1.2.2.2;lineage4 | None | ERR4815883 | Sensitive | lineage4.1.2.1 | None | ERR7902603 | Sensitive | lineage1.2.2.2 | None | SRR7069414 | Sensitive | lineage1.2.2.2 | None | SRR22249432 | Sensitive | lineage1.2.2.2 | None | SRR7069135 | Sensitive | lineage1.2.2.2 | None | SRR28045001 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR29772541 | MDR-TB | lineage1.2.2.2 | None | SRR2101434 | Sensitive | lineage4.4.1.1 | None | SRR26112801 | Sensitive | lineage4.3.2 | None | SRR29017065 | MDR-TB | lineage1.2.2.2 | None | SRR28044966 | Sensitive | lineage1.2.2.2 | None | ERR9125770 | Sensitive | lineage1.2.2.2 | None | SRR6982422 | Sensitive | lineage2.2.1 | None | SRR22249891 | Sensitive | lineage4.5 | None | SRR28409290 | Sensitive | lineage1.2.2.2 | None | SRR29055384 | Other | lineage2.2.1 | None | SRR21733181 | Sensitive | lineage1.2.2.2 | None | ERR4800048 | XDR-TB | lineage4.1.2.1 | in | SRR29017403 | MDR-TB | lineage1.2.2.2 | None | SRR21658765 | Other | lineage1.2.2.2 | None | ERR10610050 | RR-TB | lineage4.4.1.1 | None | ERR2510774 | Sensitive | lineage4.8 | it | SRR24827282 | HR-TB | lineage1.2.2.2 | None | SRR21733219 | Sensitive | lineage1.2.2.2 | None | SRR7069103 | Sensitive | lineage1.2.2.2 | None | SRR7069836 | Sensitive | lineage4.1.2.1 | None | ERR4872212 | MDR-TB | lineage4.6.2.2 | None | ERR9121422 | Sensitive | lineage4.2.2.2 | None | SRR28044405 | Sensitive | lineage1.2.2.2 | None | SRR28859686 | Sensitive | lineage1.2.2.2 | None | SRR21661648 | Other | lineage2.2.1 | None | SRR29126444 | Sensitive | lineage4.3.2 | None | SRR25340770 | HR-TB | lineage1.2.2.2 | None | ERR4553789 | RR-TB | lineage1.2.2.2 | None | ERR7902602 | Other | lineage1.2.2.2 | None | SRR27450509 | Sensitive | lineage3 | None |
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