Rv3423c - c.-158G>T
Drug resistance types
106 Sensitive
6 RR-TB
16 HR-TB
19 MDR-TB
6 Pre-XDR-TB
2 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.2 | 77 |
| lineage2.2.1 | 23 |
| lineage4.5 | 6 |
| lineage4.1.2.1 | 15 |
| lineage4.8 | 4 |
| lineage4.6.2.2 | 2 |
| lineage4.4.1.1 | 4 |
| lineage4.4.1.1.1 | 2 |
| lineage4.7 | 1 |
| lineage4.9 | 1 |
| lineage1.1.3.2 | 1 |
| lineage6 | 3 |
| lineage4.2.2.2 | 4 |
| lineage4.3.2 | 11 |
| 15 | |
| lineage4 | 1 |
| lineage2.2.2 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4;lineage1.2.2.2 | 1 |
| lineage4.6 | 1 |
| lineage3 | 1 |
| lineage1.1.1.1 | 2 |
| lineage5.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 178 |
Geographic prevalence
Country level data for this variant is available for 34 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4797869 | Pre-XDR-TB | lineage1.2.2.2 | in | ERR4797247 | Other | lineage1.2.2.2 | in | ERR4799673 | Sensitive | lineage1.2.2.2 | in | SRR6442533 | Sensitive | lineage1.2.2.2 | None | ERR4797129 | Sensitive | lineage1.2.2.2 | in | SRR6650239 | Sensitive | lineage1.2.2.2 | None | ERR4811611 | Other | lineage2.2.1 | cn | ERR4796932 | Sensitive | lineage1.2.2.2 | in | SRR6650307 | Sensitive | lineage1.2.2.2 | None | ERR4811102 | Sensitive | lineage4.5 | cn | ERR4811487 | MDR-TB | lineage2.2.1 | cn | SRR6650151 | Sensitive | lineage1.2.2.2 | None | SRR6650163 | Sensitive | lineage1.2.2.2 | None | ERR4800060 | XDR-TB | lineage4.1.2.1 | in | ERR2510774 | Sensitive | lineage4.8 | it | SRR6797503 | Sensitive | lineage1.2.2.2 | None | ERR4829007 | Pre-XDR-TB | lineage2.2.1 | it | ERR4815134 | Sensitive | lineage1.2.2.2 | gb | ERR4872212 | MDR-TB | lineage4.6.2.2 | None | SRR6650425 | Sensitive | lineage1.2.2.2 | None | SRR6896450 | Sensitive | lineage4.4.1.1 | None | ERR4800048 | XDR-TB | lineage4.1.2.1 | in | ERR4814688 | Sensitive | lineage4.1.2.1 | gb | SRR6982422 | Sensitive | lineage2.2.1 | None | SRR6797441 | Sensitive | lineage1.2.2.2 | None | SRR6797484 | Sensitive | lineage1.2.2.2 | None | SRR6807743 | Sensitive | lineage2.2.1 | None | SRR6797815 | Sensitive | lineage1.2.2.2 | None | SRR6797591 | Sensitive | lineage1.2.2.2 | None | SRR6855950 | HR-TB | lineage4.4.1.1.1 | None | ERR11043324 | Sensitive | lineage4.7 | None | ERR4817766 | Sensitive | lineage4.1.2.1 | gb | SRR7131228 | Sensitive | lineage4.8 | None | ERR4818589 | Sensitive | lineage1.2.2.2 | gb | ERR11465819 | Sensitive | lineage4.9 | None | ERR11043920 | MDR-TB | lineage1.1.3.2 | None | ERR4821560 | Sensitive | lineage4.1.2.1 | gb | ERR2513078 | Sensitive | lineage4.1.2.1 | gb | ERR2514018 | Sensitive | lineage4.1.2.1 | gb | ERR2513093 | Sensitive | lineage1.2.2.2 | gb | ERR351910 | Sensitive | lineage1.2.2.2 | None | ERR330733 | Sensitive | lineage1.2.2.2 | None | ERR351908 | Sensitive | lineage1.2.2.2 | None | ERR3801495 | Other | lineage6 | None | ERR386840 | Sensitive | lineage1.2.2.2 | None | ERR4195679 | Sensitive | lineage4.2.2.2 | None | ERR386842 | Sensitive | lineage1.2.2.2 | None | ERR2514628 | Sensitive | lineage1.2.2.2 | gb | ERR4024803 | HR-TB | lineage4.3.2 | None | ERR4553412 | MDR-TB | None | ERR4195824 | Sensitive | lineage4.2.2.2 | None | ERR4553409 | MDR-TB | lineage4 | None | ERR4553459 | MDR-TB | None | ERR4553429 | Pre-XDR-TB | None | ERR4553425 | HR-TB | None | ERR4553523 | MDR-TB | None | ERR4553496 | MDR-TB | None | ERR4553581 | MDR-TB | None | ERR4553730 | MDR-TB | None | ERR4553582 | MDR-TB | None | ERR4553584 | MDR-TB | None | ERR4553792 | MDR-TB | None | ERR4553882 | Pre-XDR-TB | None | ERR4553852 | MDR-TB | lineage1.2.2.2 | None | ERR4553789 | Pre-XDR-TB | None | ERR2513536 | Sensitive | lineage4.1.2.1 | gb | ERR2514650 | Sensitive | lineage4.1.2.1 | gb | ERR2514864 | Sensitive | lineage1.2.2.2 | gb | ERR2512598 | Sensitive | lineage1.2.2.2 | gb | ERR2515292 | HR-TB | lineage4.4.1.1.1 | za | ERR4797122 | Sensitive | lineage1.2.2.2 | None | ERR2514139 | Sensitive | lineage4.1.2.1 | gb | ERR2513808 | Sensitive | lineage4.1.2.1 | gb | ERR4797900 | Sensitive | lineage1.2.2.2 | None | ERR4811244 | HR-TB | lineage2.2.1 | None | ERR4811377 | HR-TB | lineage2.2.1 | None | ERR4800717 | HR-TB | lineage1.2.2.2 | None | ERR7902704 | Sensitive | lineage1.2.2.2 | None | ERR8699822 | HR-TB | lineage2.2.1 | None | ERR6865903 | HR-TB | lineage4.3.2 | None | ERR6866342 | Sensitive | lineage4.3.2 | None | ERR7902603 | Sensitive | lineage1.2.2.2 | None | ERR4811849 | Sensitive | lineage4.3.2 | None | ERR6866940 | Sensitive | lineage4.3.2 | None | SRR21733181 | Sensitive | lineage1.2.2.2 | None | ERR7902602 | Other | lineage1.2.2.2 | None | ERR7975650 | MDR-TB | lineage2.2.1 | None | SRR26112529 | Sensitive | lineage4.3.2 | None | SRR21732748 | HR-TB | lineage1.2.2.2 | None | SRR22249980 | Sensitive | lineage1.2.2.2 | None | SRR21733101 | Sensitive | lineage1.2.2.2 | None | SRR22249432 | Sensitive | lineage1.2.2.2 | None | SRR22251818 | Sensitive | lineage1.2.2.2 | None | ERR9117738 | Sensitive | lineage1.2.2.2 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9119606 | MDR-TB | lineage4.6.2.2 | None | SRR12142389 | Sensitive | lineage2.2.2 | None | ERR9121422 | Sensitive | lineage4.2.2.2 | None | ERR9125268 | RR-TB | lineage1.2.2.2 | None | ERR9657205 | Sensitive | lineage1.2.2.2 | None | ERR9787133 | Other | lineage6 | None | ERR9787292 | Other | lineage6 | None | SRR11972241 | Sensitive | None | ERR9121175 | Sensitive | lineage4.2.2.2 | None | ERR9125770 | Sensitive | lineage1.2.2.2 | None | ERR11050199 | Sensitive | lineage1.2.2.2 | None | SRR12882733 | Sensitive | lineage1.2.2.2 | None | SRR12142392 | Other | lineage2.2.1 | None | SRR15014789 | MDR-TB | lineage1.2.2.2 | None | ERR11050519 | Sensitive | lineage4.2.2.1 | None | SRR16058393 | RR-TB | lineage1.2.2.2 | None | SRR15316128 | Sensitive | lineage2.2.1 | None | SRR17658567 | Other | lineage1.2.2.2 | None | SRR16058537 | Sensitive | lineage1.2.2.2 | None | SRR16099301 | Sensitive | lineage1.2.2.2 | None | SRR16099306 | Sensitive | lineage1.2.2.2 | None | SRR16370664 | HR-TB | lineage1.2.2.2 | None | SRR17787492 | Sensitive | lineage4.5 | None | SRR18511631 | Sensitive | lineage2.2.1 | None | SRR17787598 | Sensitive | lineage4.5 | None | SRR18913760 | Sensitive | lineage1.2.2.2 | None | SRR18914233 | Other | lineage2.2.1 | None | SRR26112801 | Sensitive | lineage4.3.2 | None | SRR18914227 | Other | lineage2.2.1 | None | SRR19267896 | HR-TB | lineage1.2.2.2 | None | SRR19276602 | Sensitive | lineage4.3.2 | None | SRR19303885 | Sensitive | lineage1.2.2.2 | None | SRR26112809 | Sensitive | lineage1.2.2.2 | None | SRR24827282 | HR-TB | lineage1.2.2.2 | None | SRR26112817 | Sensitive | lineage1.2.2.2 | None | SRR25340748 | MDR-TB | lineage1.2.2.2 | None | SRR21277521 | Sensitive | lineage2.2.1 | None | SRR21675642 | Other | lineage2.2.1 | None | SRR21658765 | Other | lineage1.2.2.2 | None | SRR21661648 | Other | lineage2.2.1 | None | SRR21675858 | Other | lineage1.2.2.2 | None | SRR21678366 | Other | lineage1.2.2.2 | None | SRR21685362 | Other | lineage2.2.1 | None | SRR21722236 | Other | lineage2.2.1 | None | SRR21726731 | Other | lineage1.2.2.2 | None | SRR21728727 | Sensitive | lineage1.2.2.2 | None | SRR21728347 | Sensitive | lineage1.2.2.2 | None | ERR11068056 | Sensitive | lineage1.2.2.2 | None | SRR22424888 | HR-TB | lineage1.2.2.2 | None | SRR21737221 | Sensitive | lineage2.2.1 | None | SRR22424871 | Sensitive | lineage4;lineage1.2.2.2 | None | ERR11068357 | Sensitive | lineage4.8 | None | ERR11081342 | Sensitive | lineage4.6 | None | ERR11082987 | Sensitive | lineage4.8 | None | ERR9806823 | RR-TB | lineage4.4.1.1 | None | SRR24827292 | Sensitive | lineage1.2.2.2 | None | ERR10610050 | RR-TB | lineage4.4.1.1 | None | SRR21733321 | Sensitive | lineage4.5 | None | SRR21887675 | Pre-XDR-TB | lineage2.2.1 | None | SRR21733219 | Sensitive | lineage1.2.2.2 | None | SRR22250170 | Sensitive | lineage1.2.2.2 | None | SRR22249891 | Sensitive | lineage4.5 | None | SRR25340770 | HR-TB | lineage1.2.2.2 | None | SRR25515531 | Sensitive | lineage2.2.1 | None | ERR4813488 | Other | lineage4.3.2 | None | SRR27450509 | Sensitive | lineage3 | None | SRR8380882 | Sensitive | lineage1.2.2.2 | in | SRR6367396 | Other | lineage1.2.2.2 | au | ERR4815883 | Sensitive | lineage4.1.2.1 | None | ERR1035118 | Sensitive | lineage1.1.1.1 | vn | SRR5074129 | Sensitive | lineage1.1.1.1 | vn | ERR4818736 | Sensitive | lineage1.2.2.2 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4817281 | Sensitive | lineage1.2.2.2 | None | SRR2101814 | Sensitive | lineage2.2.1 | None | ERR2503450 | HR-TB | lineage4.5 | None | ERR4819737 | Sensitive | lineage4.1.2.1 | None | ERR2514692 | Other | None | SRR2101434 | Sensitive | lineage4.4.1.1 | None | ERR2653059 | Sensitive | lineage4.3.2 | None | ERR3170440 | RR-TB | lineage5.1.1 | gh | ERR4822138 | Other | lineage4.1.2.1 | None | SRR7585395 | MDR-TB | lineage1.2.2.2 | in |
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