Rv3423c - c.-164C>A


Drug resistance types
110 Sensitive 6 RR-TB 17 HR-TB 21 MDR-TB 6 Pre-XDR-TB 2 XDR-TB 24 Other
lineage Counts
lineage Count
lineage4.3.2 11
lineage5.1.1 1
lineage1.2.2.2 77
lineage4.1.2.1 15
lineage2.2.1 23
lineage4.5 6
lineage4.8 6
lineage4.1.2.1.1 1
lineage4.6.2.2 2
lineage4.4.1.1 4
lineage4.4.1.1.1 2
lineage1.1.3.2 1
lineage4.7 1
lineage4.9 1
lineage6 3
lineage4.2.2.2 4
lineage3.1.1 1
15
lineage4 3
lineage1.1 1
lineage4.2.2.1 1
lineage2.2.2 1
lineage4;lineage1.2.2.2 1
lineage4.6 1
lineage3 1
lineage1.1.1.1 2
lineage3.1.3 1
spoligotype Counts
spoligotype Count
None 186
Geographic prevalence
Country level data for this variant is available for 34 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2653059 Sensitive lineage4.3.2 None
ERR3170440 RR-TB lineage5.1.1 gh
SRR6650307 Sensitive lineage1.2.2.2 None
ERR4822138 Other lineage4.1.2.1 None
SRR7585395 MDR-TB lineage1.2.2.2 in
ERR4796932 Sensitive lineage1.2.2.2 in
ERR4797869 Pre-XDR-TB lineage1.2.2.2 in
ERR4797247 Other lineage1.2.2.2 in
ERR4811611 Other lineage2.2.1 cn
ERR4797129 Sensitive lineage1.2.2.2 in
SRR6650163 Sensitive lineage1.2.2.2 None
SRR6442533 Sensitive lineage1.2.2.2 None
ERR4811102 Sensitive lineage4.5 cn
SRR6650239 Sensitive lineage1.2.2.2 None
ERR4811487 MDR-TB lineage2.2.1 cn
SRR6650151 Sensitive lineage1.2.2.2 None
ERR4800060 XDR-TB lineage4.1.2.1 in
ERR4799673 Sensitive lineage1.2.2.2 in
ERR2510774 Sensitive lineage4.8 it
SRR6650425 Sensitive lineage1.2.2.2 None
ERR4800048 XDR-TB lineage4.1.2.1 in
ERR4829007 Pre-XDR-TB lineage2.2.1 it
ERR4815134 Sensitive lineage1.2.2.2 gb
ERR4972533 MDR-TB lineage4.1.2.1.1 None
ERR4814688 Sensitive lineage4.1.2.1 gb
ERR4872212 MDR-TB lineage4.6.2.2 None
SRR6982422 Sensitive lineage2.2.1 None
SRR6896450 Sensitive lineage4.4.1.1 None
SRR6797591 Sensitive lineage1.2.2.2 None
SRR6797484 Sensitive lineage1.2.2.2 None
SRR6797441 Sensitive lineage1.2.2.2 None
SRR6797503 Sensitive lineage1.2.2.2 None
ERR4821560 Sensitive lineage4.1.2.1 gb
SRR6797815 Sensitive lineage1.2.2.2 None
SRR6807743 Sensitive lineage2.2.1 None
SRR6855950 HR-TB lineage4.4.1.1.1 None
SRR7131228 Sensitive lineage4.8 None
ERR11043920 MDR-TB lineage1.1.3.2 None
ERR4817766 Sensitive lineage4.1.2.1 gb
ERR4818589 Sensitive lineage1.2.2.2 gb
ERR11043324 Sensitive lineage4.7 None
ERR11465819 Sensitive lineage4.9 None
ERR2513078 Sensitive lineage4.1.2.1 gb
ERR2514018 Sensitive lineage4.1.2.1 gb
ERR2513093 Sensitive lineage1.2.2.2 gb
ERR330733 Sensitive lineage1.2.2.2 None
ERR351908 Sensitive lineage1.2.2.2 None
ERR3801495 Other lineage6 None
ERR351910 Sensitive lineage1.2.2.2 None
ERR386842 Sensitive lineage1.2.2.2 None
ERR4024803 HR-TB lineage4.3.2 None
ERR386840 Sensitive lineage1.2.2.2 None
ERR2514628 Sensitive lineage1.2.2.2 gb
ERR4195679 Sensitive lineage4.2.2.2 None
ERR405195 MDR-TB lineage3.1.1 None
ERR4195824 Sensitive lineage4.2.2.2 None
ERR4553581 MDR-TB None
ERR4553409 MDR-TB lineage4 None
ERR4553459 MDR-TB None
ERR4553412 MDR-TB None
ERR4553496 MDR-TB None
ERR4553523 MDR-TB None
ERR4553584 MDR-TB None
ERR4553425 HR-TB None
ERR4553429 Pre-XDR-TB None
ERR4553582 MDR-TB None
ERR4553730 MDR-TB None
ERR4553789 Pre-XDR-TB None
ERR4553792 MDR-TB None
ERR4553882 Pre-XDR-TB None
ERR4553852 MDR-TB lineage1.2.2.2 None
ERR2512598 Sensitive lineage1.2.2.2 gb
ERR2514864 Sensitive lineage1.2.2.2 gb
ERR2514650 Sensitive lineage4.1.2.1 gb
ERR2513536 Sensitive lineage4.1.2.1 gb
ERR2515292 HR-TB lineage4.4.1.1.1 za
ERR2513808 Sensitive lineage4.1.2.1 gb
ERR4811244 HR-TB lineage2.2.1 None
ERR4800009 Other lineage1.1 None
ERR2514139 Sensitive lineage4.1.2.1 gb
ERR4797122 Sensitive lineage1.2.2.2 None
ERR4797900 Sensitive lineage1.2.2.2 None
ERR4811377 HR-TB lineage2.2.1 None
ERR4800717 HR-TB lineage1.2.2.2 None
ERR6866342 Sensitive lineage4.3.2 None
ERR4811849 Sensitive lineage4.3.2 None
ERR8699822 HR-TB lineage2.2.1 None
ERR6865903 HR-TB lineage4.3.2 None
SRR21733181 Sensitive lineage1.2.2.2 None
ERR6866940 Sensitive lineage4.3.2 None
ERR7902603 Sensitive lineage1.2.2.2 None
ERR7902602 Other lineage1.2.2.2 None
SRR26112529 Sensitive lineage4.3.2 None
ERR7902704 Sensitive lineage1.2.2.2 None
ERR7975650 MDR-TB lineage2.2.1 None
SRR21732748 HR-TB lineage1.2.2.2 None
SRR21733101 Sensitive lineage1.2.2.2 None
SRR22249432 Sensitive lineage1.2.2.2 None
SRR22249980 Sensitive lineage1.2.2.2 None
ERR9117805 Other lineage4.3.2 None
SRR22251818 Sensitive lineage1.2.2.2 None
ERR9117738 Sensitive lineage1.2.2.2 None
ERR9125770 Sensitive lineage1.2.2.2 None
ERR9119606 MDR-TB lineage4.6.2.2 None
ERR9121175 Sensitive lineage4.2.2.2 None
ERR9121422 Sensitive lineage4.2.2.2 None
ERR9125268 RR-TB lineage1.2.2.2 None
ERR9657205 Sensitive lineage1.2.2.2 None
SRR17658567 Other lineage1.2.2.2 None
ERR9787292 Other lineage6 None
SRR12142392 Other lineage2.2.1 None
ERR11050519 Sensitive lineage4.2.2.1 None
SRR16058393 RR-TB lineage1.2.2.2 None
SRR16058537 Sensitive lineage1.2.2.2 None
SRR16099306 Sensitive lineage1.2.2.2 None
SRR16370664 HR-TB lineage1.2.2.2 None
ERR9787133 Other lineage6 None
ERR11050199 Sensitive lineage1.2.2.2 None
SRR11972241 Sensitive None
SRR12142389 Sensitive lineage2.2.2 None
SRR12882733 Sensitive lineage1.2.2.2 None
SRR15014789 MDR-TB lineage1.2.2.2 None
SRR15316128 Sensitive lineage2.2.1 None
SRR16099301 Sensitive lineage1.2.2.2 None
SRR17787598 Sensitive lineage4.5 None
SRR17787492 Sensitive lineage4.5 None
SRR18913760 Sensitive lineage1.2.2.2 None
SRR18511631 Sensitive lineage2.2.1 None
SRR19276602 Sensitive lineage4.3.2 None
SRR18914233 Other lineage2.2.1 None
SRR19267896 HR-TB lineage1.2.2.2 None
SRR18914227 Other lineage2.2.1 None
SRR26112817 Sensitive lineage1.2.2.2 None
SRR19303885 Sensitive lineage1.2.2.2 None
SRR26112801 Sensitive lineage4.3.2 None
SRR24827282 HR-TB lineage1.2.2.2 None
SRR26112809 Sensitive lineage1.2.2.2 None
SRR21277521 Sensitive lineage2.2.1 None
SRR25340748 MDR-TB lineage1.2.2.2 None
SRR21678366 Other lineage1.2.2.2 None
SRR21675642 Other lineage2.2.1 None
SRR21658765 Other lineage1.2.2.2 None
SRR21661648 Other lineage2.2.1 None
SRR21675858 Other lineage1.2.2.2 None
SRR21728727 Sensitive lineage1.2.2.2 None
SRR21722236 Other lineage2.2.1 None
SRR21726731 Other lineage1.2.2.2 None
SRR21728347 Sensitive lineage1.2.2.2 None
SRR21685362 Other lineage2.2.1 None
SRR22424888 HR-TB lineage1.2.2.2 None
SRR21737221 Sensitive lineage2.2.1 None
SRR22424871 Sensitive lineage4;lineage1.2.2.2 None
SRR21887675 Pre-XDR-TB lineage2.2.1 None
ERR11081342 Sensitive lineage4.6 None
ERR9806823 RR-TB lineage4.4.1.1 None
ERR11068056 Sensitive lineage1.2.2.2 None
ERR11068357 Sensitive lineage4.8 None
ERR11082987 Sensitive lineage4.8 None
ERR10610050 RR-TB lineage4.4.1.1 None
SRR21733219 Sensitive lineage1.2.2.2 None
SRR6367396 Other lineage1.2.2.2 au
SRR21733321 Sensitive lineage4.5 None
SRR24827292 Sensitive lineage1.2.2.2 None
SRR22250170 Sensitive lineage1.2.2.2 None
SRR22249891 Sensitive lineage4.5 None
SRR25340770 HR-TB lineage1.2.2.2 None
SRR25515531 Sensitive lineage2.2.1 None
SRR27450509 Sensitive lineage3 None
SRR8380882 Sensitive lineage1.2.2.2 in
ERR4813488 Other lineage4.3.2 None
ERR2229388 Sensitive lineage4 None
ERR4815883 Sensitive lineage4.1.2.1 None
ERR2229072 Sensitive lineage4.8 None
ERR1035118 Sensitive lineage1.1.1.1 vn
ERR2229489 HR-TB lineage4.8 None
ERR4817281 Sensitive lineage1.2.2.2 None
ERR2229729 Sensitive lineage4 None
SRR2101434 Sensitive lineage4.4.1.1 None
ERR4818785 RR-TB lineage4.1.2.1 None
SRR5074129 Sensitive lineage1.1.1.1 vn
ERR4818736 Sensitive lineage1.2.2.2 None
ERR2503450 HR-TB lineage4.5 None
ERR257889 Sensitive lineage3.1.3 None
ERR2514692 Other None
ERR4819737 Sensitive lineage4.1.2.1 None
SRR2101814 Sensitive lineage2.2.1 None