Rv3423c - c.-164C>A


Drug resistance types
106 Sensitive 4 RR-TB 14 HR-TB 14 MDR-TB 6 Pre-XDR-TB 2 XDR-TB 37 Other
lineage Counts
lineage Count
lineage2.2.1 35
lineage4.1.2.1 19
lineage1.2.2.2 83
lineage4.8 3
lineage4.2.2.2 3
lineage5.1.1 1
lineage4.5 6
lineage2.2.2 1
lineage4.6.2.2 3
lineage1.1.3.2 1
lineage3.1.1 1
M.canetti 2
lineage4.7 1
lineage4.4.1.1 4
lineage4.6 1
lineage3 1
lineage6.1.3 4
lineage1.2.2.2;lineage4 1
lineage4.3.2 7
lineage4.4.1.1.1 2
1
lineage1.1.1.1 2
lineage4.2.2.1 1
spoligotype Counts
spoligotype Count
None 183
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4811377 HR-TB lineage2.2.1 None
ERR4800060 XDR-TB lineage4.1.2.1 in
SRR7069103 Sensitive lineage1.2.2.2 None
SRR7131228 Sensitive lineage4.8 None
ERR4819737 Sensitive lineage4.1.2.1 None
ERR4195679 Sensitive lineage4.2.2.2 None
SRR28859849 Other lineage2.2.1 None
ERR3170440 RR-TB lineage5.1.1 gh
SRR28044405 Sensitive lineage1.2.2.2 None
ERR4799673 Sensitive lineage1.2.2.2 in
ERR11082987 Sensitive lineage4.8 None
ERR13265177 Other lineage1.2.2.2 None
ERR4797122 Sensitive lineage1.2.2.2 None
SRR25340770 HR-TB lineage1.2.2.2 None
ERR4553789 RR-TB lineage1.2.2.2 None
ERR4811244 HR-TB lineage2.2.1 None
ERR7902602 Other lineage1.2.2.2 None
ERR2503450 HR-TB lineage4.5 None
SRR21726731 Other lineage1.2.2.2 None
ERR4829007 Pre-XDR-TB lineage2.2.1 it
ERR4797129 Sensitive lineage1.2.2.2 in
SRR12142389 Sensitive lineage2.2.2 None
SRR26112535 Other lineage2.2.1 None
SRR25515421 Sensitive lineage2.2.1 None
SRR28045447 Other lineage1.2.2.2 None
SRR29055833 Other lineage2.2.1 None
SRR18914227 Other lineage2.2.1 None
ERR9119606 MDR-TB lineage4.6.2.2 None
ERR2514650 Sensitive lineage4.1.2.1 gb
ERR13267616 Sensitive lineage1.2.2.2 None
ERR11043920 MDR-TB lineage1.1.3.2 None
ERR4797247 Other lineage1.2.2.2 in
ERR2514139 Sensitive lineage4.1.2.1 gb
SRR28045183 Sensitive lineage1.2.2.2 None
SRR28044817 Sensitive lineage1.2.2.2 None
SRR26112809 Sensitive lineage1.2.2.2 None
SRR28045891 Sensitive lineage1.2.2.2 None
SRR28044966 Sensitive lineage1.2.2.2 None
ERR4811102 Sensitive lineage4.5 cn
SRR15316128 Sensitive lineage2.2.1 None
SRR29052944 Other lineage1.2.2.2 None
SRR28409290 Sensitive lineage1.2.2.2 None
SRR29055384 Other lineage2.2.1 None
ERR405195 MDR-TB lineage3.1.1 None
ERR2513536 Sensitive lineage4.1.2.1 gb
SRR29017253 MDR-TB lineage1.2.2.2 None
ERR266123 Sensitive M.canetti None
SRR29056001 HR-TB lineage1.2.2.2 None
SRR29017403 MDR-TB lineage1.2.2.2 None
ERR2513078 Sensitive lineage4.1.2.1 gb
ERR7902704 Sensitive lineage1.2.2.2 None
SRR7070443 Sensitive lineage4.1.2.1 None
ERR11043324 Sensitive lineage4.7 None
SRR6896450 Sensitive lineage4.4.1.1 None
ERR2514018 Sensitive lineage4.1.2.1 gb
ERR11081342 Sensitive lineage4.6 None
SRR22424888 HR-TB lineage1.2.2.2 None
ERR2513093 Sensitive lineage1.2.2.2 gb
ERR4872212 MDR-TB lineage4.6.2.2 None
ERR9121422 Sensitive lineage4.2.2.2 None
ERR4821560 Sensitive lineage4.1.2.1 gb
SRR17658567 Other lineage1.2.2.2 None
SRR27450509 Sensitive lineage3 None
SRR28170827 Other lineage2.2.1 None
ERR4814688 Sensitive lineage4.1.2.1 gb
SRR16099301 Sensitive lineage1.2.2.2 None
SRR21733101 Sensitive lineage1.2.2.2 None
SRR18913760 Sensitive lineage1.2.2.2 None
ERR4796932 Other lineage1.2.2.2 in
SRR21675642 Other lineage2.2.1 None
SRR21887675 Pre-XDR-TB lineage2.2.1 None
ERR9806823 RR-TB lineage4.4.1.1 None
SRR21277521 Sensitive lineage2.2.1 None
SRR2101814 Sensitive lineage2.2.1 None
SRR7585395 MDR-TB lineage1.2.2.2 in
SRR12142392 Other lineage2.2.1 None
ERR3801495 Other lineage6.1.3 None
ERR4797900 Sensitive lineage1.2.2.2 None
SRR21732748 HR-TB lineage1.2.2.2 None
ERR13260430 Sensitive lineage2.2.1 None
ERR4818589 Sensitive lineage1.2.2.2 gb
SRR22424871 Sensitive lineage1.2.2.2;lineage4 None
ERR7902603 Sensitive lineage1.2.2.2 None
SRR19276602 Sensitive lineage4.3.2 None
ERR266124 Other M.canetti None
SRR28858603 Sensitive lineage1.2.2.2 None
SRR7069414 Sensitive lineage1.2.2.2 None
SRR6367396 Other lineage1.2.2.2 au
SRR21678366 Other lineage1.2.2.2 None
ERR6866342 Sensitive lineage4.3.2 None
ERR2515292 HR-TB lineage4.4.1.1.1 za
SRR8380882 Sensitive lineage1.2.2.2 in
ERR9657205 Sensitive lineage1.2.2.2 None
SRR16099306 Sensitive lineage1.2.2.2 None
ERR4553425 HR-TB None
SRR26112268 Sensitive lineage1.2.2.2 None
SRR7069135 Sensitive lineage1.2.2.2 None
SRR25207291 MDR-TB lineage2.2.1 None
SRR28045001 Pre-XDR-TB lineage1.2.2.2 None
SRR28045981 Sensitive lineage1.2.2.2 None
ERR2512598 Sensitive lineage1.2.2.2 gb
SRR29772541 MDR-TB lineage1.2.2.2 None
SRR26112529 Sensitive lineage4.3.2 None
SRR2101434 Sensitive lineage4.4.1.1 None
SRR26112801 Sensitive lineage4.3.2 None
SRR21675858 Other lineage1.2.2.2 None
SRR24827292 Sensitive lineage1.2.2.2 None
ERR13292456 Sensitive lineage1.2.2.2 None
ERR9787133 Other lineage6.1.3 None
SRR6982422 Sensitive lineage2.2.1 None
SRR29016870 MDR-TB lineage1.2.2.2 None
SRR21733181 Sensitive lineage1.2.2.2 None
SRR15014789 MDR-TB lineage1.2.2.2 None
SRR25340748 MDR-TB lineage1.2.2.2 None
ERR10610050 RR-TB lineage4.4.1.1 None
ERR2510774 Sensitive lineage4.8 it
SRR24827282 HR-TB lineage1.2.2.2 None
ERR4813488 Other lineage4.3.2 None
SRR6855950 Sensitive lineage4.4.1.1.1 None
SRR17787492 Sensitive lineage4.5 None
SRR7069515 Sensitive lineage4.1.2.1 None
SRR7069836 Sensitive lineage4.1.2.1 None
ERR1035118 Sensitive lineage1.1.1.1 vn
SRR19303885 Sensitive lineage1.2.2.2 None
ERR4817766 Sensitive lineage4.1.2.1 gb
ERR2513808 Sensitive lineage4.1.2.1 gb
SRR28859686 Sensitive lineage1.2.2.2 None
SRR21661648 Other lineage2.2.1 None
SRR29126444 Sensitive lineage4.3.2 None
SRR26111952 Sensitive lineage4.6.2.2 None
SRR28409488 Sensitive lineage4.3.2 None
ERR8699822 HR-TB lineage2.2.1 None
ERR13292493 Other lineage2.2.1 None
ERR13291816 Other lineage2.2.1 None
ERR4800717 HR-TB lineage1.2.2.2 None
ERR11050199 Sensitive lineage1.2.2.2 None
ERR2514864 Sensitive lineage1.2.2.2 gb
SRR21685362 Other lineage2.2.1 None
SRR4423177 Pre-XDR-TB lineage1.2.2.2 None
SRR22251818 Sensitive lineage1.2.2.2 None
SRR26112817 Sensitive lineage1.2.2.2 None
ERR4811487 MDR-TB lineage2.2.1 cn
SRR29440882 HR-TB lineage1.2.2.2 None
ERR11050519 Sensitive lineage4.2.2.1 None
SRR22250170 Sensitive lineage1.2.2.2 None
SRR18511631 Sensitive lineage2.2.1 None
SRR17787598 Sensitive lineage4.5 None
SRR21722236 Other lineage2.2.1 None
SRR26112631 Other lineage2.2.1 None
ERR13265896 Other lineage1.2.2.2 None
SRR7070158 Sensitive lineage4.1.2.1 None
SRR22249980 Other lineage1.2.2.2 None
SRR21733321 Sensitive lineage4.5 None
SRR7069172 Sensitive lineage4.1.2.1 None
ERR13259782 Sensitive lineage2.2.1 None
ERR9121175 Sensitive lineage4.2.2.2 None
SRR29440909 Sensitive lineage1.2.2.2 None
SRR6807743 Sensitive lineage2.2.1 None
ERR1023251 Other lineage6.1.3 None
SRR28706459 Sensitive lineage2.2.1 None
SRR21737221 Sensitive lineage2.2.1 None
SRR28045450 Other lineage1.2.2.2 None
ERR4797869 Pre-XDR-TB lineage1.2.2.2 in
SRR16058537 Sensitive lineage1.2.2.2 None
ERR4811611 Other lineage2.2.1 cn
ERR4815883 Sensitive lineage4.1.2.1 None
SRR5074129 Sensitive lineage1.1.1.1 vn
SRR29017140 Pre-XDR-TB lineage1.2.2.2 None
SRR22249432 Sensitive lineage1.2.2.2 None
ERR13261521 Sensitive lineage1.2.2.2 None
SRR29124256 HR-TB lineage1.2.2.2 None
ERR4815134 Sensitive lineage1.2.2.2 gb
SRR25515531 Sensitive lineage2.2.1 None
SRR29056227 Other lineage2.2.1 None
SRR29017065 MDR-TB lineage1.2.2.2 None
ERR9125770 Sensitive lineage1.2.2.2 None
ERR11068056 Sensitive lineage1.2.2.2 None
SRR7069963 Sensitive lineage4.1.2.1 None
SRR22249891 Sensitive lineage4.5 None
ERR4800048 XDR-TB lineage4.1.2.1 in
ERR9787292 Other lineage6.1.3 None
SRR21658765 Other lineage1.2.2.2 None
SRR21733219 Sensitive lineage1.2.2.2 None