lineage | Count |
---|---|
lineage4.1.1 | 2 |
lineage2.2.1 | 47 |
lineage4.2.2.1 | 1 |
lineage3 | 8 |
lineage4.1.2.1 | 10 |
lineage4.9;lineage4.3.3 | 2 |
lineage4.3.3 | 11 |
lineage1.2.2.2 | 1 |
lineage4.9;lineage4.3.4.1 | 1 |
lineage4.9 | 20 |
lineage4.3.4.2 | 1 |
lineage2.2.2 | 6 |
lineage2.2.1.1 | 6 |
lineage4.5 | 5 |
lineage4.2.1 | 2 |
lineage4.8 | 3 |
La1.4 | 1 |
lineage4.2.2 | 1 |
lineage1.2.1.2.1 | 1 |
lineage4.3.4.1 | 1 |
lineage1.1.1.1 | 1 |
lineage1.2.1.2 | 1 |
lineage1.1.3.3 | 1 |
lineage4.1.1.3 | 1 |
lineage4.6.5 | 1 |
lineage4.3 | 1 |
lineage4.4.2 | 1 |
lineage4;lineage3;lineage2.2.1 | 1 |
La1.7.1 | 1 |
spoligotype | Count |
---|---|
None | 139 |
ID | Drug resistance | Lineage | Country iso2 | ERR495025 | Sensitive | lineage4.1.1 | None | ERR11043561 | MDR-TB | lineage2.2.1 | None | ERR11043085 | MDR-TB | lineage4.2.2.1 | None | ERR4011087 | HR-TB | lineage2.2.1 | None | ERR11043872 | Sensitive | lineage3 | None | SRR20958108 | Sensitive | lineage4.1.2.1 | None | ERR4812248 | Sensitive | lineage4.1.2.1 | None | SRR20958074 | Sensitive | lineage4.1.2.1 | None | SRR20958130 | Sensitive | lineage4.9;lineage4.3.3 | None | SRR20958093 | Sensitive | lineage4.3.3 | None | SRR20958091 | Sensitive | lineage4.1.2.1 | None | SRR20958128 | Sensitive | lineage4.9;lineage4.3.3 | None | ERR7902650 | Sensitive | lineage1.2.2.2 | None | SRR20958150 | Sensitive | lineage4.3.3 | None | SRR20958155 | Sensitive | lineage4.1.2.1 | None | SRR20958147 | Sensitive | lineage4.3.3 | None | SRR27241221 | Sensitive | lineage2.2.1 | None | SRR20958075 | Sensitive | lineage4.3.3 | None | SRR20958082 | Sensitive | lineage4.9;lineage4.3.4.1 | None | SRR23650986 | Sensitive | lineage4.9 | None | SRR20958106 | Sensitive | lineage4.1.2.1 | None | SRR20958113 | Sensitive | lineage4.3.3 | None | SRR20958154 | Sensitive | lineage4.3.4.2 | None | SRR20958132 | Sensitive | lineage4.9 | None | ERR9029871 | HR-TB | lineage4.1.2.1 | None | SRR20958146 | Sensitive | lineage4.3.3 | None | SRR16295796 | Sensitive | lineage2.2.1 | None | ERR9992835 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993034 | MDR-TB | lineage4.1.2.1 | None | SRR1172109 | MDR-TB | lineage4.1.1 | None | SRR14802099 | MDR-TB | lineage2.2.1 | None | SRR16295795 | Sensitive | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206917 | Pre-XDR-TB | lineage2.2.2 | None | SRR25206907 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206904 | MDR-TB | lineage2.2.1.1 | None | SRR25827791 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207035 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827628 | XDR-TB | lineage3 | None | SRR25207067 | XDR-TB | lineage2.2.1.1 | None | SRR25207267 | Pre-XDR-TB | lineage4.5 | None | SRR25207273 | MDR-TB | lineage2.2.1 | None | SRR25207318 | Pre-XDR-TB | lineage4.5 | None | SRR25905991 | MDR-TB | lineage4.3.3 | None | SRR23861715 | HR-TB | lineage4.2.1 | None | ERR11068921 | Other | lineage2.2.1 | None | SRR23861990 | Sensitive | lineage4.8 | None | SRR23861888 | Sensitive | lineage4.8 | None | SRR21887664 | MDR-TB | lineage2.2.1 | None | SRR21887673 | MDR-TB | lineage2.2.1 | None | SRR21887767 | MDR-TB | lineage2.2.1 | None | SRR21887751 | MDR-TB | lineage4.5 | None | SRR21887661 | MDR-TB | lineage2.2.1 | None | SRR23562879 | Other | La1.4 | None | SRR21887780 | MDR-TB | lineage2.2.1.1 | None | SRR21887668 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887711 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887712 | MDR-TB | lineage2.2.1 | None | SRR21887759 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887716 | MDR-TB | lineage4.2.2 | None | SRR21887769 | MDR-TB | lineage2.2.1 | None | SRR21887784 | MDR-TB | lineage2.2.1 | None | SRR21887694 | MDR-TB | lineage2.2.1 | None | SRR21887682 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887757 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887707 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887718 | RR-TB | lineage2.2.1 | None | SRR21887729 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887765 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887753 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887770 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887761 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887760 | Pre-XDR-TB | lineage2.2.1 | None | SRR23316631 | Other | lineage2.2.1 | None | SRR23316589 | HR-TB | lineage1.2.1.2.1 | None | SRR23650981 | HR-TB | lineage4.9 | None | SRR23650982 | HR-TB | lineage4.9 | None | SRR23650983 | HR-TB | lineage4.9 | None | SRR20958135 | Sensitive | lineage4.1.2.1 | None | SRR20958121 | Sensitive | lineage4.3.3 | None | SRR20958086 | Sensitive | lineage4.3.3 | None | SRR20958138 | Sensitive | lineage4.3.4.1 | None | SRR23316606 | HR-TB | lineage2.2.1 | None | SRR23316592 | HR-TB | lineage1.1.1.1 | None | SRR23316604 | HR-TB | lineage2.2.1 | None | SRR23316618 | Other | lineage2.2.1 | None | SRR23316612 | HR-TB | lineage2.2.1 | None | SRR23316609 | HR-TB | lineage1.2.1.2 | None | SRR23316619 | HR-TB | lineage1.1.3.3 | None | SRR23316640 | HR-TB | lineage2.2.1 | None | SRR26800486 | Sensitive | lineage4.1.1.3 | None | SRR26800463 | Other | lineage4.6.5 | None | SRR25206913 | Pre-XDR-TB | lineage2.2.2 | None | SRR25207180 | XDR-TB | lineage2.2.2 | None | SRR26800447 | Sensitive | lineage3 | None | SRR26800452 | Sensitive | lineage3 | None | SRR26800479 | Sensitive | lineage4.2.1 | None | SRR26800489 | Sensitive | lineage3 | None | SRR25206892 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR25206901 | HR-TB | lineage2.2.1 | None | SRR25206903 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR26056410 | Sensitive | lineage4.3 | None | SRR25207064 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207043 | MDR-TB | lineage2.2.1 | None | SRR25460167 | Sensitive | lineage4.3.3 | None | SRR25207038 | MDR-TB | lineage2.2.2 | None | SRR25207065 | Pre-XDR-TB | lineage4.5 | None | SRR25207185 | MDR-TB | lineage2.2.1 | None | SRR21700938 | Other | lineage4.9 | None | SRR21700837 | Sensitive | lineage4.9 | None | SRR21700896 | Other | lineage4.9 | None | SRR21700906 | Other | lineage4.9 | None | SRR21700914 | Other | lineage4.9 | None | SRR21700956 | Other | lineage4.9 | None | SRR25207313 | MDR-TB | lineage4.4.2 | None | SRR25460166 | Sensitive | lineage4.3.3 | None | SRR25524704 | Sensitive | lineage4.9 | None | SRR21700851 | Sensitive | lineage4.9 | None | SRR21700857 | Sensitive | lineage4.9 | None | SRR21700977 | Sensitive | lineage4.9 | None | SRR22502076 | Other | lineage4.9 | None | SRR25827324 | Pre-XDR-TB | lineage4;lineage3;lineage2.2.1 | None | SRR23961480 | Other | La1.7.1 | None | SRR25827478 | MDR-TB | lineage4.8 | None | SRR26800441 | Sensitive | lineage3 | None | SRR26800460 | Sensitive | lineage3 | None | SRR26442320 | Sensitive | lineage4.1.2.1 | None | SRR26800476 | Sensitive | lineage3 | None | SRR28119723 | Sensitive | lineage2.2.1 | None | SRR21700798 | Other | lineage4.9 | None | SRR28119772 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR28119828 | MDR-TB | lineage4.5 | None | SRR28119763 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119786 | MDR-TB | lineage2.2.2 | None | SRR21700803 | Other | lineage4.9 | None | SRR21700903 | Other | lineage4.9 | None | SRR21700919 | Other | lineage4.9 | None | SRR23691368 | Other | lineage2.2.1 | None | SRR23691385 | Other | lineage2.2.1 | None |
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